Personal tools

FFCP PHASE1:Mm9::chr8:47825107..47825145,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:47825107..47825145,+
|DHSsupport=NA
|short_description=p1@Irf2
|DPIdataset=NA
|description=CAGE_peak_1_at_Irf2_5end
|association_with_transcript=8bp_to_ENSMUST00000034041,NM_008391,uc009lqo.2,uc012gdl.1_5end
|EntrezGene=16363
|EntrezGene=16363
|HGNC=
|HGNC=
|MCL_coexpression_id=542
|TSSclassifier=NA
|UniProt=P23906,Q3U2Z2
|UniProt=P23906,Q3U2Z2
|association_with_transcript=8bp_to_ENSMUST00000034041,NM_008391,uc009lqo.2,uc012gdl.1_5end
|cluster_id=chr8:47825107..47825145,+
|description=CAGE_peak_1_at_Irf2_5end
|id=chr8:47825107..47825145,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.21e-15!130;UBERON:0000925!1.21e-15!130;UBERON:0006595!1.21e-15!130;UBERON:0001007!2.48e-15!128;UBERON:0001555!2.48e-15!128;UBERON:0007026!2.48e-15!128;UBERON:0004921!1.35e-14!126;UBERON:0004185!1.35e-14!126;UBERON:0003104!6.32e-09!131;UBERON:0009142!6.32e-09!131;UBERON:0000926!2.17e-08!193;UBERON:0004120!2.17e-08!193;UBERON:0006603!2.17e-08!193;UBERON:0000077!2.92e-08!97;UBERON:0005911!4.53e-08!69;UBERON:0005409!1.04e-07!59;UBERON:0001041!2.12e-07!92;UBERON:0002405!2.66e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.28e-15,118;UBERON:0000925,1.28e-15,118;UBERON:0006595,1.28e-15,118;UBERON:0001007,2.54e-15,116;UBERON:0001555,2.54e-15,116;UBERON:0007026,2.54e-15,116;UBERON:0004921,1.37e-14,114;UBERON:0005409,3.12e-08,47;UBERON:0005911,4.53e-08,69;UBERON:0001041,1.94e-07,80
|phase1_expression=19.0577128054705,79.5663929417743,87.3598539627909,95.2762265616515,112.200643507982,44.6558863285627,51.3947809310156,87.0291199996224,31.677462484125,31.1305820008251,27.7373108525318,17.4701028199787,103.234040148517,106.915152158434,32.6447566579349,46.9742620344396,43.3728364439451,103.471590237502,113.667865459157,96.3364509581529,38.2694805679814,89.4611470319977,61.1207506585109,74.7164614445209,63.7757801366733,52.8293406985819,60.7374414584295,59.9010026866772,74.4891804268986,60.2352010126234,38.581108854023,22.8611042445467,20.2971379902908,31.6963362030877,46.2162591602039,31.750817263472,37.3629921960135,168.668247186974,118.762972367618,151.298362008428,177.057677897335,208.328872912326,164.588009677561,48.0925844666705,48.3567961917084,42.5828465015101,43.0315239391422,25.7269684528927,35.8088477857189,38.4971200167081,25.8974880006921,24.4379359420452,85.2335638773301,70.3601277751004,94.1062637598899,40.6469908936796,63.610423666404,38.1597348285307,5.05791152148994,4.23192783417626,6.97214543856797,21.0083609882862,18.6751907183339,65.6926793615421,83.0647744556259,65.3641705750412,37.1504137042822,48.0272881651943,6.84351441235953,8.37036817656482,7.57169860864975,11.4260393761521,13.9147180799517,5.38959516545798,6.80502844229478,4.5960939330501,16.5173821499083,17.8762273319263,16.4358990584181,3.69281605644543,5.21479568533735,6.77187381723788,11.4465029590566,16.3201156909187,18.0301932376636,13.5529149317887,15.8032565687004,8.76077395378913,31.1991916532718,34.0827736081603,88.9883980314151,68.8339101585109,12.9194553404473,65.8437893798137,81.2220521809586,68.5481137258923,53.0879908098022,39.5398348381094,32.2134645707557,21.9070536196411,22.9574774235989,37.2146784501522,43.3168907501298,21.3320010945999,20.3501578550541,25.8427062784601,21.7375511356357,62.6869499657639,249.098244068579,46.610831666355,25.502343034622,30.142082352902,36.6678640637133,31.3503092349455,51.386265018303,41.8469749127819,76.3832450299215,84.7352231550682,53.0766331169925,37.0446086379567,62.0564666873706,67.8825354389311,83.876292548155,30.4492028892009,25.761944938055,83.0235429427922,36.9030583478234,26.9956228947033,34.5631017638736,21.7196427136993,21.5025283324754,6.40837195775608,24.1615805067264,24.2929684463814,17.6619837875626,21.0913641988085,32.1812389766999,65.4380665409089,27.5467806692705,51.5582546921861,15.2240918266363,9.88579049063934,14.945156773844,23.0578371288644,28.847475640163,31.515975190073,27.0797983977616,48.894937069674,16.383167462896,24.9620025821521,26.2167175004284,16.6588756644957,34.1998116547485,35.8699731517832,43.2142486456681,22.2918378836712,17.5553296828309,27.2788781541598,21.8805894534606,18.8484453007307,18.0585066185444,21.4273853138608,24.8581972364471,33.0563909335638,32.2418265934621,36.507829325814,34.8755421819505,44.8378914689931,35.3803677313983,51.0560813285986,56.2617538248239,47.514995913233,52.4724775545611,59.3192370920843,19.3466752678997,13.7892180588241,176.443630113348,81.9796756656987,20.2623838008472,24.8493238890669,37.5004312447292,47.3956282864855,41.5846941989907,41.6594121186505,76.3991789086664,42.3276313640708,60.8231205296652,66.0535487176621,55.3698007418301,98.8701349519644,93.1554994959932,116.29850358055,16.5011073829181,22.6212054967263,27.0498565615393,27.2892779312721,34.5235427158374,37.1018487219785,44.1391029127316,49.4493995731667,42.2326577893298,42.078432897334,78.5599461780945,21.6898637430922,17.8868685553015,23.1607975756399,26.1689556591169,32.5589165665763,34.3744899904917,47.4698626793838,47.6677566718604,35.6929837144506,104.950790764969,71.4510619523526,62.7195722960267,75.7736633841335,69.2474016194581,91.6642690590398,120.089573608293,13.2643988239339,27.0521860893763,37.5136639563166,57.7338010789715,73.0327282446317,106.643551116934,105.567303491069,79.9210180618388,91.0219874456465,95.9917707318072,118.473176539479,96.8762748267674,117.599684626769,110.077637275669,80.498041205169,49.6681915749227,55.4632860072512,25.3669932180711,27.7791697223522,35.0820783106085,49.2318308048527,42.2781014017784,41.3865068954437,44.8080667284222,33.2166629154047,36.0933852013478,25.1938112402061,41.6955022725141,47.3454489816325,56.5261522463529,39.5225219198823,42.0142652216475,22.0801348547396,32.4145049113616,51.3057082444585,38.4960901185892,24.5208442516531,27.2091201268276,35.2691499143529,33.6644157884081,38.4293934929909,46.775521063448,38.8981090540931,43.492680162936,45.5092931427575,57.9802347162493,56.7245487865028,48.0019844112841,16.0254373687866,12.8065096944927,18.2186479776853,24.8276327099183,30.5010678099541,34.5552943264454,34.4045392499497,34.9660845014928,69.480919243333,46.9725487857069,78.1560838942615,50.8612944092102,36.8511971311032,33.6630010088845,33.9771662472277,82.7805576028776,30.4097495297236,60.317420921642,39.2135049130123,61.4845830867443,76.6659620009092,93.6355459889022,61.5413285925546,53.3732270180706,62.5582991886751,49.890190543397,80.1923319132695,13.6024477239888,32.1244758060421,43.9581737144731,43.4903655710095,46.0745009504435,38.9757961052132,49.9226872581029,49.2101170929976,86.971647078793,55.2991988647364,3.94585057078933,25.5673293735204,17.7040584789094,26.4453616147905,26.7360834598903,29.736278086377,38.9626032303903,28.5147602808251,22.859337084805,14.2534631287344,13.8254403003775,57.8300350749566,25.1379266959804,33.9973268215578,33.7794139742267,40.8180866121858,47.4848437927223,51.6840432935866,54.6451250545936,59.469239019459,56.6216573446649,59.9915801564201,81.3773304176933,70.3308562390808,82.0475853314614,45.1193463394271,26.1943424981396,33.0146992322871,25.686346303704,68.1959266933632,54.9909653071963,57.6927616441885,66.2398291354313,68.2138061488094,10.7302850097243,14.7304075682297,22.3429250241365,21.8253541576483,10.9613203163303,13.5970901530146,13.5004500046361,18.463169332193,25.3759749031155,17.0860902878101,12.6620564052696,8.77854721482268,14.5123564891014,30.3883396335368,17.3978924981225,20.5904729464016,26.2251138805906,29.4630131851619,23.7480215097943,29.0601793528367,27.8827229879264,34.707246815038,32.680886106989,32.332701964459,35.1505070008353,31.4353836246829,28.1598912045999,30.6725660537291,31.7306143618546,30.764574308089,34.9726637433124,29.46098382245,36.2423008719928,32.9936365755386,32.1854081020431,34.4381454119123,28.170907822407,29.9899471039141,33.9510284614654,27.4959713112292,23.7270036248348,32.4079747015604,25.7815557196904,33.1564840137967,33.3728436997375,22.4829520144151,34.6218780499204,38.2470476205971,31.3712864592903,32.8681214488078,31.7658934799977
|phase1_expression=19.0577128054705,79.5663929417743,87.3598539627909,95.2762265616515,112.200643507982,44.6558863285627,51.3947809310156,87.0291199996224,31.677462484125,31.1305820008251,27.7373108525318,17.4701028199787,103.234040148517,106.915152158434,32.6447566579349,46.9742620344396,43.3728364439451,103.471590237502,113.667865459157,96.3364509581529,38.2694805679814,89.4611470319977,61.1207506585109,74.7164614445209,63.7757801366733,52.8293406985819,60.7374414584295,59.9010026866772,74.4891804268986,60.2352010126234,38.581108854023,22.8611042445467,20.2971379902908,31.6963362030877,46.2162591602039,31.750817263472,37.3629921960135,168.668247186974,118.762972367618,151.298362008428,177.057677897335,208.328872912326,164.588009677561,48.0925844666705,48.3567961917084,42.5828465015101,43.0315239391422,25.7269684528927,35.8088477857189,38.4971200167081,25.8974880006921,24.4379359420452,85.2335638773301,70.3601277751004,94.1062637598899,40.6469908936796,63.610423666404,38.1597348285307,5.05791152148994,4.23192783417626,6.97214543856797,21.0083609882862,18.6751907183339,65.6926793615421,83.0647744556259,65.3641705750412,37.1504137042822,48.0272881651943,6.84351441235953,8.37036817656482,7.57169860864975,11.4260393761521,13.9147180799517,5.38959516545798,6.80502844229478,4.5960939330501,16.5173821499083,17.8762273319263,16.4358990584181,3.69281605644543,5.21479568533735,6.77187381723788,11.4465029590566,16.3201156909187,18.0301932376636,13.5529149317887,15.8032565687004,8.76077395378913,31.1991916532718,34.0827736081603,88.9883980314151,68.8339101585109,12.9194553404473,65.8437893798137,81.2220521809586,68.5481137258923,53.0879908098022,39.5398348381094,32.2134645707557,21.9070536196411,22.9574774235989,37.2146784501522,43.3168907501298,21.3320010945999,20.3501578550541,25.8427062784601,21.7375511356357,62.6869499657639,249.098244068579,46.610831666355,25.502343034622,30.142082352902,36.6678640637133,31.3503092349455,51.386265018303,41.8469749127819,76.3832450299215,84.7352231550682,53.0766331169925,37.0446086379567,62.0564666873706,67.8825354389311,83.876292548155,30.4492028892009,25.761944938055,83.0235429427922,36.9030583478234,26.9956228947033,34.5631017638736,21.7196427136993,21.5025283324754,6.40837195775608,24.1615805067264,24.2929684463814,17.6619837875626,21.0913641988085,32.1812389766999,65.4380665409089,27.5467806692705,51.5582546921861,15.2240918266363,9.88579049063934,14.945156773844,23.0578371288644,28.847475640163,31.515975190073,27.0797983977616,48.894937069674,16.383167462896,24.9620025821521,26.2167175004284,16.6588756644957,34.1998116547485,35.8699731517832,43.2142486456681,22.2918378836712,17.5553296828309,27.2788781541598,21.8805894534606,18.8484453007307,18.0585066185444,21.4273853138608,24.8581972364471,33.0563909335638,32.2418265934621,36.507829325814,34.8755421819505,44.8378914689931,35.3803677313983,51.0560813285986,56.2617538248239,47.514995913233,52.4724775545611,59.3192370920843,19.3466752678997,13.7892180588241,176.443630113348,81.9796756656987,20.2623838008472,24.8493238890669,37.5004312447292,47.3956282864855,41.5846941989907,41.6594121186505,76.3991789086664,42.3276313640708,60.8231205296652,66.0535487176621,55.3698007418301,98.8701349519644,93.1554994959932,116.29850358055,16.5011073829181,22.6212054967263,27.0498565615393,27.2892779312721,34.5235427158374,37.1018487219785,44.1391029127316,49.4493995731667,42.2326577893298,42.078432897334,78.5599461780945,21.6898637430922,17.8868685553015,23.1607975756399,26.1689556591169,32.5589165665763,34.3744899904917,47.4698626793838,47.6677566718604,35.6929837144506,104.950790764969,71.4510619523526,62.7195722960267,75.7736633841335,69.2474016194581,91.6642690590398,120.089573608293,13.2643988239339,27.0521860893763,37.5136639563166,57.7338010789715,73.0327282446317,106.643551116934,105.567303491069,79.9210180618388,91.0219874456465,95.9917707318072,118.473176539479,96.8762748267674,117.599684626769,110.077637275669,80.498041205169,49.6681915749227,55.4632860072512,25.3669932180711,27.7791697223522,35.0820783106085,49.2318308048527,42.2781014017784,41.3865068954437,44.8080667284222,33.2166629154047,36.0933852013478,25.1938112402061,41.6955022725141,47.3454489816325,56.5261522463529,39.5225219198823,42.0142652216475,22.0801348547396,32.4145049113616,51.3057082444585,38.4960901185892,24.5208442516531,27.2091201268276,35.2691499143529,33.6644157884081,38.4293934929909,46.775521063448,38.8981090540931,43.492680162936,45.5092931427575,57.9802347162493,56.7245487865028,48.0019844112841,16.0254373687866,12.8065096944927,18.2186479776853,24.8276327099183,30.5010678099541,34.5552943264454,34.4045392499497,34.9660845014928,69.480919243333,46.9725487857069,78.1560838942615,50.8612944092102,36.8511971311032,33.6630010088845,33.9771662472277,82.7805576028776,30.4097495297236,60.317420921642,39.2135049130123,61.4845830867443,76.6659620009092,93.6355459889022,61.5413285925546,53.3732270180706,62.5582991886751,49.890190543397,80.1923319132695,13.6024477239888,32.1244758060421,43.9581737144731,43.4903655710095,46.0745009504435,38.9757961052132,49.9226872581029,49.2101170929976,86.971647078793,55.2991988647364,3.94585057078933,25.5673293735204,17.7040584789094,26.4453616147905,26.7360834598903,29.736278086377,38.9626032303903,28.5147602808251,22.859337084805,14.2534631287344,13.8254403003775,57.8300350749566,25.1379266959804,33.9973268215578,33.7794139742267,40.8180866121858,47.4848437927223,51.6840432935866,54.6451250545936,59.469239019459,56.6216573446649,59.9915801564201,81.3773304176933,70.3308562390808,82.0475853314614,45.1193463394271,26.1943424981396,33.0146992322871,25.686346303704,68.1959266933632,54.9909653071963,57.6927616441885,66.2398291354313,68.2138061488094,10.7302850097243,14.7304075682297,22.3429250241365,21.8253541576483,10.9613203163303,13.5970901530146,13.5004500046361,18.463169332193,25.3759749031155,17.0860902878101,12.6620564052696,8.77854721482268,14.5123564891014,30.3883396335368,17.3978924981225,20.5904729464016,26.2251138805906,29.4630131851619,23.7480215097943,29.0601793528367,27.8827229879264,34.707246815038,32.680886106989,32.332701964459,35.1505070008353,31.4353836246829,28.1598912045999,30.6725660537291,31.7306143618546,30.764574308089,34.9726637433124,29.46098382245,36.2423008719928,32.9936365755386,32.1854081020431,34.4381454119123,28.170907822407,29.9899471039141,33.9510284614654,27.4959713112292,23.7270036248348,32.4079747015604,25.7815557196904,33.1564840137967,33.3728436997375,22.4829520144151,34.6218780499204,38.2470476205971,31.3712864592903,32.8681214488078,31.7658934799977
|short_description=p1@Irf2
}}
}}

Latest revision as of 14:38, 25 September 2015

Short description:p1@Irf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Irf2_5end
Coexpression cluster:MCL_coexpression_mm9:542
Association with transcript: 8bp_to_ENSMUST00000034041, NM_008391, uc009lqo.2, uc012gdl.1_5end
EntrezGene:Irf2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Irf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I579.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I687.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I395.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I4112.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I851.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E987.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E731.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F231.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4103.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8106.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A132.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A346.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A543.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2103.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4113.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A696.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H289.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I961.12
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D174.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D263.78
GP2+ M cell, pool1.CNhs13228.11845-124H952.83
GP2+ M cell, pool2.CNhs13231.11846-124I160.74
GP2+ M cell, pool3.CNhs13240.11847-124I259.90
Ileum epithelium, pool1.CNhs13199.10252-104B974.49
Ileum epithelium, pool2.CNhs13232.10253-104C160.24
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C838.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F546.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.75
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8168.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1118.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3151.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9177.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2208.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4164.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D848.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D948.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B835.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A285.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I970.36
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A194.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C140.65
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E163.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C538.16
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.01
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C765.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E783.06
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D265.36
Mouse Microglia, donor1.CNhs12629.11718-123C837.15
Mouse Microglia, donor2.CNhs12634.11736-123E848.03
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D931.20
Mouse Schwann, donor2.CNhs12573.11746-123F934.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G388.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F768.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C865.84
Mouse hepatocyte, donor6.CNhs13090.11822-124F481.22
Mouse hepatocyte, donor8.CNhs13091.11824-124F668.55
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A753.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I739.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B662.69
accessory axillary lymph node, adult.CNhs10475.1063-29H9249.10
adrenal gland, adult.CNhs10508.49-24D746.61
adrenal gland, embryo E14.CNhs11038.406-44C525.50
adrenal gland, embryo E16.CNhs11004.1254-43D630.14
adrenal gland, embryo E17.CNhs11043.1263-45I136.67
adrenal gland, embryo E18.CNhs11026.1262-18F531.35
adrenal gland, neonate N00.CNhs11191.1311-23C151.39
adrenal gland, neonate N25.CNhs11223.1377-27I341.85
amnion, adult pregnant day17.5.CNhs10488.583-22A876.38
aorta, adult.CNhs10498.46-23H184.74
bone (os femoris), adult.CNhs10483.56-12G253.08
bone (os femoris), neonate N02.CNhs11227.1985-43F537.04
bone (os femoris), neonate N16.CNhs11225.1525-43A662.06
bone (os femoris), neonate N20.CNhs11195.1350-25C367.88
cecum, adult.CNhs10467.37-13H483.88
cerebellum, adult.CNhs10494.15-8B230.45
cerebellum, neonate N30.CNhs11135.1395-42I225.76
colon, adult.CNhs10468.36-18H783.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.56
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D524.16
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B221.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A265.44
epididymis, adult.CNhs10490.58-23B227.55
eyeball, adult.CNhs10484.31-12G451.56
eyeball, embryo E12.CNhs11016.345-16C615.22
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D423.06
eyeball, neonate N00.CNhs11207.633-15C628.85
eyeball, neonate N01.CNhs11140.1532-43E731.52
eyeball, neonate N02.CNhs11205.1551-44G827.08
eyeball, neonate N16.CNhs11188.777-19A248.89
forelimb, embryo E11.CNhs10596.335-25E216.38
forelimb, embryo E12.CNhs10600.359-14H224.96
forelimb, embryo E13.CNhs10589.384-1E226.22
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E734.20
forelimb, embryo E17.CNhs10598.1517-43C435.87
forelimb, embryo E18.CNhs11008.1520-43B543.21
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.28
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.88
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I921.43
heart, embryo E14.CNhs10597.403-26D424.86
heart, embryo E15.CNhs11017.431-16C833.06
heart, embryo E16.CNhs11021.457-17C632.24
heart, embryo E17.CNhs11025.479-18E536.51
heart, embryo E18.CNhs11030.1283-20G334.88
heart, neonate N00.CNhs11213.639-21E344.84
heart, neonate N03.CNhs11221.1349-25I235.38
heart, neonate N10.CNhs11118.749-24G151.06
heart, neonate N16.CNhs11209.782-15G156.26
heart, neonate N20.CNhs11127.821-26I647.51
heart, neonate N25.CNhs11196.1351-25D352.47
heart, neonate N30.CNhs11202.1390-42D259.32
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G113.79
intestinal mucosa, adult.CNhs10506.860-29I3176.44
intestine, adult.CNhs10496.178-9A381.98
intestine, embryo E12.CNhs11019.1251-16I520.26
intestine, embryo E13.CNhs11010.381-16D524.85
intestine, embryo E15.CNhs10602.976-16D837.50
intestine, embryo E16.CNhs10585.463-22H447.40
intestine, embryo E17.CNhs10582.482-18D341.58
intestine, embryo E18.CNhs10526.1289-20F741.66
intestine, neonate N00.CNhs11126.644-26D176.40
intestine, neonate N01.CNhs11192.1322-23E942.33
intestine, neonate N06.CNhs11102.688-20B860.82
intestine, neonate N07.CNhs11095.720-20F266.05
intestine, neonate N10.CNhs11098.755-23A555.37
intestine, neonate N20.CNhs11187.827-18D198.87
intestine, neonate N25.CNhs11121.1352-25E393.16
intestine, neonate N30.CNhs11131.1384-42G1116.30
kidney, embryo E14.CNhs10606.411-4I916.50
kidney, embryo E15.CNhs10997.434-16F822.62
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I227.29
kidney, embryo E18.CNhs11001.1288-20C734.52
kidney, neonate N00.CNhs11214.646-21G737.10
kidney, neonate N10.CNhs11206.758-6D544.14
kidney, neonate N20.CNhs11113.832-19I149.45
kidney, neonate N25.CNhs11122.1353-25F342.23
kidney, neonate N30.CNhs11203.1385-42H142.08
liver, adult pregnant day01.CNhs10466.508-5B278.56
liver, embryo E12.CNhs10601.355-15F821.69
liver, embryo E13.CNhs10524.378-3H617.89
liver, embryo E14.CNhs10594.409-16E123.16
liver, embryo E15.CNhs10520.433-16D726.17
liver, embryo E16.CNhs10523.462-17F532.56
liver, embryo E17.CNhs10510.481-18A334.37
liver, embryo E18.CNhs10579.499-43G447.47
liver, neonate N00.CNhs11117.641-24F447.67
liver, neonate N03.CNhs11123.1345-25G235.69
liver, neonate N06.CNhs11101.684-20A8104.95
liver, neonate N07.CNhs11103.716-20H271.45
liver, neonate N10.CNhs11115.751-24B962.72
liver, neonate N20.CNhs11220.823-25A375.77
liver, neonate N25.CNhs11198.1368-26H169.25
liver, neonate N30.CNhs11106.1382-42D191.66
lung, adult.CNhs10474.28-22B1120.09
lung, embryo E12.CNhs10522.354-16G213.26
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C537.51
lung, embryo E16.CNhs10998.458-17B657.73
lung, embryo E17.CNhs10605.480-44A673.03
lung, embryo E18.CNhs10583.1287-20I6106.64
lung, neonate N00.CNhs11224.640-42C6105.57
lung, neonate N06.CNhs11212.683-20E579.92
lung, neonate N07.CNhs11111.715-19A391.02
lung, neonate N10.CNhs11219.750-23E695.99
lung, neonate N20.CNhs11109.822-18A4118.47
lung, neonate N25.CNhs11119.1359-25C796.88
lung, neonate N30.CNhs11133.1394-42H2117.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1110.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A180.50
mammary gland, adult lactating day02.CNhs10480.595-22B649.67
mammary gland, adult pregnant day19.CNhs10476.588-5H255.46
medulla oblongata, adult.CNhs10477.17-12C225.37
medulla oblongata, neonate N30.CNhs11200.1396-42A327.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C735.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E142.28
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E344.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D733.22
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D441.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D547.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D656.53
olfactory brain, adult.CNhs10489.18-22I939.52
ovary, adult.CNhs10507.91-2I742.01
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I432.41
oviduct, adult pregnant day01.CNhs10500.988-6G651.31
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F424.52
pancreas, embryo E15.CNhs11042.1556-45F227.21
pancreas, embryo E16.CNhs11003.460-26E535.27
pancreas, embryo E17.CNhs10599.1558-45G333.66
pancreas, embryo E18.CNhs10580.1535-43I738.43
pancreas, neonate N00.CNhs11105.645-26G946.78
pancreas, neonate N01.CNhs11138.1531-43D738.90
pancreas, neonate N02.CNhs11139.1539-43D843.49
pancreas, neonate N16.CNhs11136.787-43B645.51
pancreas, neonate N25.CNhs11094.1555-45E257.98
pancreas, neonate N30.CNhs11182.1548-44H556.72
pituitary gland, adult.CNhs10493.21-1G848.00
pituitary gland, embryo E12.CNhs11018.346-16E616.03
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B924.83
pituitary gland, embryo E16.CNhs11036.449-43F630.50
pituitary gland, embryo E17.CNhs11039.1265-44F534.56
pituitary gland, neonate N00.CNhs11190.1308-22E934.40
placenta, adult pregnant day10.CNhs10472.539-13I734.97
placenta, adult pregnant day17.CNhs10464.577-18G369.48
prostate, adult.CNhs10470.859-1F846.97
skin, adult.CNhs10492.30-1C378.16
skin, neonate N00.CNhs11124.650-25G450.86
skin, neonate N03.CNhs11215.662-22H336.85
skin, neonate N06.CNhs11097.693-20I533.66
skin, neonate N10.CNhs11108.762-6C433.98
small intestine, neonate N16.CNhs11114.790-21I182.78
spinal cord, adult.CNhs10505.24-13C930.41
spleen, adult.CNhs10465.25-2G260.32
spleen, embryo E16.CNhs11035.461-43C139.21
spleen, embryo E18.CNhs11011.1271-21F261.48
spleen, neonate N10.CNhs11116.752-24D176.67
spleen, neonate N20.CNhs11112.824-19H193.64
spleen, neonate N25.CNhs11099.1354-25G361.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C962.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.89
stomach, adult.CNhs10503.33-1H680.19
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G832.12
stomach, embryo E16.CNhs11022.459-17D443.96
stomach, embryo E17.CNhs11006.1035-18D543.49
stomach, embryo E18.CNhs10999.1286-20C646.07
stomach, neonate N03.CNhs11193.1340-24B838.98
stomach, neonate N07.CNhs11210.718-18A949.92
stomach, neonate N25.CNhs11104.1355-25E449.21
stomach, neonate N30.CNhs11134.1386-42I186.97
submandibular gland, adult.CNhs10469.59-29C155.30
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F525.57
testis, embryo E15.CNhs11034.443-27C517.70
testis, embryo E16.CNhs11033.470-26G526.45
testis, embryo E17.CNhs11029.486-18I526.74
testis, embryo E18.CNhs11027.503-18G529.74
testis, neonate N00.CNhs11189.1300-22B738.96
testis, neonate N07.CNhs11222.726-26I428.51
testis, neonate N10.CNhs11204.763-44D922.86
testis, neonate N20.CNhs11110.839-18H314.25
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B557.83
thymus, embryo E14.CNhs11041.402-44I425.14
thymus, embryo E15.CNhs11005.430-45I234.00
thymus, embryo E16.CNhs11002.456-26C533.78
thymus, embryo E17.CNhs10581.478-18C140.82
thymus, embryo E18.CNhs10595.1273-19G447.48
thymus, neonate N02.CNhs11181.1541-43F851.68
thymus, neonate N03.CNhs11137.2104-43C754.65
thymus, neonate N06.CNhs11197.681-26C459.47
thymus, neonate N07.CNhs11211.713-19D356.62
thymus, neonate N10.CNhs11194.748-24E459.99
thymus, neonate N20.CNhs11186.820-7A281.38
thymus, neonate N25.CNhs11125.1362-25G770.33
thymus, neonate N30.CNhs11132.1393-42G282.05
tongue, adult.CNhs10499.32-1B445.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.69
urinary bladder, adult.CNhs10481.879-12E468.20
uterus, adult pregnant day19.CNhs10497.590-15F554.99
uterus, adult.CNhs10509.92-27E557.69
vagina, adult.CNhs10502.89-27D566.24
vesicular gland, adult.CNhs10491.51-27F868.21
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I812.66
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H214.51
whole body, embryo E14.5.CNhs10578.420-27D230.39
whole body, embryo E14.CNhs10519.395-14B117.40
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.44
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G536.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G527.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G532.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F933.37
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B334.62
whole body, neonate N00.CNhs10525.657-19C238.25
whole body, neonate N01.CNhs10576.659-23C631.37
whole body, neonate N06.CNhs10515.692-21D132.87
whole body, neonate N10.CNhs10518.761-6B431.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.28e-15118
endoderm1.28e-15118
presumptive endoderm1.28e-15118
digestive system2.54e-15116
digestive tract2.54e-15116
primitive gut2.54e-15116
subdivision of digestive tract1.37e-14114
gastrointestinal system3.12e-0847
endo-epithelium4.53e-0869
foregut1.94e-0780
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:47825107..47825145,%2B&oldid=4196919"