Personal tools

FFCP PHASE1:Mm9::chr9:53418390..53418433,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:53418390..53418433,-
|DHSsupport=NA
|short_description=p2@Acat1
|DPIdataset=NA
|description=CAGE_peak_2_at_Acat1_5end
|association_with_transcript=1bp_to_ENSMUST00000167130_5end
|EntrezGene=110446
|EntrezGene=110446
|HGNC=
|HGNC=
|MCL_coexpression_id=96
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000167130_5end
|cluster_id=chr9:53418390..53418433,-
|description=CAGE_peak_2_at_Acat1_5end
|id=chr9:53418390..53418433,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!7.14e-10!47;UBERON:0002365!1.19e-08!25;UBERON:0002330!1.19e-08!25;UBERON:0002107!1.31e-08!22;UBERON:0007499!1.31e-08!22;UBERON:0006925!1.31e-08!22;UBERON:0009497!1.31e-08!22;UBERON:0000015!1.31e-08!22;UBERON:0002423!1.31e-08!22;UBERON:0006235!1.31e-08!22;UBERON:0008835!1.31e-08!22;UBERON:0003894!1.31e-08!22;UBERON:0004161!1.31e-08!22;UBERON:0008836!1.31e-08!22;UBERON:0009854!1.34e-08!23;UBERON:0009856!1.34e-08!23
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.14e-10,47;UBERON:0002365,1.19e-08,25;UBERON:0002330,1.19e-08,25;UBERON:0002107,1.31e-08,22;UBERON:0007499,1.31e-08,22;UBERON:0006925,1.31e-08,22;UBERON:0009497,1.31e-08,22;UBERON:0000015,1.31e-08,22;UBERON:0002423,1.31e-08,22;UBERON:0006235,1.31e-08,22;UBERON:0008835,1.31e-08,22;UBERON:0003894,1.31e-08,22;UBERON:0004161,1.31e-08,22;UBERON:0008836,1.31e-08,22;UBERON:0009854,1.34e-08,23;UBERON:0009856,1.34e-08,23
|phase1_expression=22.5809874417759,28.6159834264276,27.7549536027617,43.8573106394904,40.5725541256541,19.3061162698673,22.4268134971705,16.0112921067555,17.8801677132617,15.6823232635736,3.4243593645101,2.95156988282745,22.5984963509192,24.7399738845763,18.3210368998615,18.4252493324742,20.9868563438444,20.8205029136437,17.0021897671116,14.429248161133,50.2605844792822,52.3263312828665,49.8891597255367,71.3566205658594,49.7818139915759,28.711598205751,33.5994357004078,30.5969150413962,30.4037471130198,36.0403085556701,27.2728528106025,4.44521471421742,1.23012957516914,15.8481681015439,46.5051107799552,52.3639132879251,44.1005809526717,20.9265815368454,41.4107732597614,31.9349483824017,12.3528612486513,12.9778642142105,16.9928623560904,31.2224108579432,28.7910484663421,19.0888622248149,14.0830441982647,30.3054967368821,17.3552084360233,21.5817187972455,27.2973522169457,34.5006154475932,18.7916518784665,26.8383992544197,25.5431287348273,17.7509010864803,19.1977404758967,19.5955395065428,20.4339625468194,30.6814767977779,25.9870875437533,14.5703148789727,16.8966011261116,16.6481447697059,16.8107281636386,12.7886420690298,9.88680364710736,15.7529505181837,28.6183329971398,30.3763361246304,31.1280942800045,64.8427734596634,72.6657499730808,36.6247489652713,34.7919059796198,31.2534387447407,41.8440347797677,33.7094572544896,34.4078634493985,22.420668914133,27.7207560115301,22.3992749339407,44.669279840221,31.5147061617741,38.0467636964257,55.6848026545232,63.3553979556008,38.2118863941866,15.7510482133023,19.6486056277642,14.4932244350839,302.869204697448,244.78968013479,673.009879972358,564.655706762024,534.944103194219,307.292391248273,36.8129496768605,32.2134645707557,28.2671659608272,22.5349471642689,26.9485602570067,5.09610479413291,14.2213340630666,6.27824018932521,7.60079596425296,2.02209778005913,409.805944311706,25.63485048107,40.9700303818916,54.1274219510344,84.3369374924631,76.5643450890114,97.2161031564415,87.0156432804216,131.6985877135,35.8432703214842,347.472254678548,31.8459798701955,86.7070315718113,53.2228059489548,45.5782737947109,54.0536107532554,28.3997373101201,30.369772487951,64.1197208573564,49.1242010474273,47.9922184794726,48.2866862877646,32.3547781114417,33.3975440057597,39.832429619778,31.2883776346098,36.5673103982373,35.5317556196848,38.4511793470586,34.116186889856,43.9156606253628,34.6230179054134,123.739811261247,10.0192741081282,18.1622662502444,26.289070951581,36.9226803697502,20.2068402479444,32.412771232067,29.9845518591132,65.451952796971,6.46703978798527,13.615637772083,24.105304010461,43.4007550206598,50.8826466082844,48.4070511465812,57.0016517850003,32.0445169577774,64.6036132328176,48.3814065375664,47.7394678984596,56.959587447263,79.0352822136294,78.6871208584635,76.2318048584377,101.53034358166,135.292258002231,146.961453082258,150.501378185186,152.729067816258,221.662117833458,313.724023855151,375.997138673679,430.266562992753,326.910121668374,308.943175986376,31.333202336055,49.4971185544358,125.889556316827,40.1964861328587,18.7693660471006,24.6170872172065,33.118937559778,62.9252596824829,104.962436694779,156.365464664524,104.396393539793,130.935669005589,338.297191045163,379.608948654516,365.362699261231,114.150064899086,97.2621224436124,104.350027185288,26.3638382324784,31.6468379928949,29.3040112750009,39.9156602576816,47.3244068689007,52.5317290978486,87.5193673799721,193.369293853279,212.576277497221,195.584504816054,534.504086638129,21.0224833202278,29.4838492669804,42.7238013531222,94.3299564456538,165.447531590158,295.620613918228,525.33314698518,344.375221670175,1103.4623196029,1230.65584787415,1703.66125842641,1824.17223702772,724.143643074369,579.633043089298,547.090953226058,27.3434721446575,21.0335467065238,29.9855556653328,28.3474293244564,31.2138030223708,28.9785825374341,44.0380735639125,23.8063050386515,32.9457451181939,32.9982387576675,32.6882275747849,37.1969724404725,37.2999560830334,27.3386720719057,19.6028669121054,23.9318500880232,81.63286932116,59.3264004555175,50.4128852561667,51.2215070407928,74.262530255634,101.998254590567,17.0374438484779,21.4741309363151,24.1274205460735,28.6762557543062,18.2694912747563,20.3815102167959,24.6934528021686,24.5494920645502,27.2748566783101,25.0630626809009,57.6276745945571,50.926762648835,32.4145049113616,20.7862354945395,98.2314023715725,25.2491861601181,31.1393263673694,52.6208172518956,46.3623971822813,59.334983553178,98.4611796970922,93.0646347462414,115.148653218265,122.306225321161,81.172328602749,84.5711454635132,34.7248397868864,11.7039711120352,19.2744438836304,28.0781515891386,33.3399639247474,32.819862438781,40.3145100475196,25.2705907765117,14.7843176080138,19.2767184486076,39.4745832518382,40.891790729487,46.0173616083331,66.8870337453248,62.9092252896529,59.0907239082221,161.480383492937,45.2437736905644,20.3336348149445,41.6901473285709,35.1869602002452,26.9366893516708,24.7416552175056,24.0217081866849,53.8831623080521,50.9423286458115,46.8497911196997,188.070111748977,12.6534397432454,25.2116139237292,37.3698479243432,40.5631294268069,80.3574234585934,118.545760472257,272.756403893609,195.008176778102,41.3471764800819,45.9791091684325,24.2387963634202,38.4257523333025,48.8102546848438,51.3351137228286,69.4879850310193,83.1264137414629,58.7959765615227,62.2376959554081,27.7877262728134,16.6693043369944,27.0748205882394,38.8693678372659,43.5859212873853,49.5066813534467,49.4998335545399,38.4907395685085,38.1468201180029,35.8182439569507,40.3192409186596,44.9300702269257,41.1516755936999,43.2544334237046,38.983152295901,33.000661682633,34.2449323391997,114.725574109297,6.65957860122194,4.03712354742641,6.04384618910682,32.0694726093436,23.6479919068489,19.9635270451319,19.2931541171159,14.5455910170255,50.827665835536,57.5406545633971,66.45587955897,54.3056056206053,32.1988784292202,24.9279986138601,35.1011700120539,31.9728054289197,33.9856806738153,24.3347346523355,14.4264413142006,17.1580695562443,31.5857170645148,62.2353195694833,68.9627305046062,126.85202083051,133.570283408771,130.008121117742,120.665622806523,119.020386740749,128.007046444571,132.792944335798,117.145525844823,125.745399323163,117.283227607362,111.452723760239,104.411777676315,105.328434373183,110.851107316089,122.322302631684,150.176732544812,125.475394954652,124.702127342449,133.864049718375,128.741632408172,127.17575566119,130.793500604032,134.1655528333,113.53223917514,126.818153394649,117.09276288856,105.005778212351,109.264688526307,123.484662425215,105.519916206684,46.9643886523338,128.89631625342,127.633406104689,103.104410985107,128.384205927558,152.337168002617
|phase1_expression=22.5809874417759,28.6159834264276,27.7549536027617,43.8573106394904,40.5725541256541,19.3061162698673,22.4268134971705,16.0112921067555,17.8801677132617,15.6823232635736,3.4243593645101,2.95156988282745,22.5984963509192,24.7399738845763,18.3210368998615,18.4252493324742,20.9868563438444,20.8205029136437,17.0021897671116,14.429248161133,50.2605844792822,52.3263312828665,49.8891597255367,71.3566205658594,49.7818139915759,28.711598205751,33.5994357004078,30.5969150413962,30.4037471130198,36.0403085556701,27.2728528106025,4.44521471421742,1.23012957516914,15.8481681015439,46.5051107799552,52.3639132879251,44.1005809526717,20.9265815368454,41.4107732597614,31.9349483824017,12.3528612486513,12.9778642142105,16.9928623560904,31.2224108579432,28.7910484663421,19.0888622248149,14.0830441982647,30.3054967368821,17.3552084360233,21.5817187972455,27.2973522169457,34.5006154475932,18.7916518784665,26.8383992544197,25.5431287348273,17.7509010864803,19.1977404758967,19.5955395065428,20.4339625468194,30.6814767977779,25.9870875437533,14.5703148789727,16.8966011261116,16.6481447697059,16.8107281636386,12.7886420690298,9.88680364710736,15.7529505181837,28.6183329971398,30.3763361246304,31.1280942800045,64.8427734596634,72.6657499730808,36.6247489652713,34.7919059796198,31.2534387447407,41.8440347797677,33.7094572544896,34.4078634493985,22.420668914133,27.7207560115301,22.3992749339407,44.669279840221,31.5147061617741,38.0467636964257,55.6848026545232,63.3553979556008,38.2118863941866,15.7510482133023,19.6486056277642,14.4932244350839,302.869204697448,244.78968013479,673.009879972358,564.655706762024,534.944103194219,307.292391248273,36.8129496768605,32.2134645707557,28.2671659608272,22.5349471642689,26.9485602570067,5.09610479413291,14.2213340630666,6.27824018932521,7.60079596425296,2.02209778005913,409.805944311706,25.63485048107,40.9700303818916,54.1274219510344,84.3369374924631,76.5643450890114,97.2161031564415,87.0156432804216,131.6985877135,35.8432703214842,347.472254678548,31.8459798701955,86.7070315718113,53.2228059489548,45.5782737947109,54.0536107532554,28.3997373101201,30.369772487951,64.1197208573564,49.1242010474273,47.9922184794726,48.2866862877646,32.3547781114417,33.3975440057597,39.832429619778,31.2883776346098,36.5673103982373,35.5317556196848,38.4511793470586,34.116186889856,43.9156606253628,34.6230179054134,123.739811261247,10.0192741081282,18.1622662502444,26.289070951581,36.9226803697502,20.2068402479444,32.412771232067,29.9845518591132,65.451952796971,6.46703978798527,13.615637772083,24.105304010461,43.4007550206598,50.8826466082844,48.4070511465812,57.0016517850003,32.0445169577774,64.6036132328176,48.3814065375664,47.7394678984596,56.959587447263,79.0352822136294,78.6871208584635,76.2318048584377,101.53034358166,135.292258002231,146.961453082258,150.501378185186,152.729067816258,221.662117833458,313.724023855151,375.997138673679,430.266562992753,326.910121668374,308.943175986376,31.333202336055,49.4971185544358,125.889556316827,40.1964861328587,18.7693660471006,24.6170872172065,33.118937559778,62.9252596824829,104.962436694779,156.365464664524,104.396393539793,130.935669005589,338.297191045163,379.608948654516,365.362699261231,114.150064899086,97.2621224436124,104.350027185288,26.3638382324784,31.6468379928949,29.3040112750009,39.9156602576816,47.3244068689007,52.5317290978486,87.5193673799721,193.369293853279,212.576277497221,195.584504816054,534.504086638129,21.0224833202278,29.4838492669804,42.7238013531222,94.3299564456538,165.447531590158,295.620613918228,525.33314698518,344.375221670175,1103.4623196029,1230.65584787415,1703.66125842641,1824.17223702772,724.143643074369,579.633043089298,547.090953226058,27.3434721446575,21.0335467065238,29.9855556653328,28.3474293244564,31.2138030223708,28.9785825374341,44.0380735639125,23.8063050386515,32.9457451181939,32.9982387576675,32.6882275747849,37.1969724404725,37.2999560830334,27.3386720719057,19.6028669121054,23.9318500880232,81.63286932116,59.3264004555175,50.4128852561667,51.2215070407928,74.262530255634,101.998254590567,17.0374438484779,21.4741309363151,24.1274205460735,28.6762557543062,18.2694912747563,20.3815102167959,24.6934528021686,24.5494920645502,27.2748566783101,25.0630626809009,57.6276745945571,50.926762648835,32.4145049113616,20.7862354945395,98.2314023715725,25.2491861601181,31.1393263673694,52.6208172518956,46.3623971822813,59.334983553178,98.4611796970922,93.0646347462414,115.148653218265,122.306225321161,81.172328602749,84.5711454635132,34.7248397868864,11.7039711120352,19.2744438836304,28.0781515891386,33.3399639247474,32.819862438781,40.3145100475196,25.2705907765117,14.7843176080138,19.2767184486076,39.4745832518382,40.891790729487,46.0173616083331,66.8870337453248,62.9092252896529,59.0907239082221,161.480383492937,45.2437736905644,20.3336348149445,41.6901473285709,35.1869602002452,26.9366893516708,24.7416552175056,24.0217081866849,53.8831623080521,50.9423286458115,46.8497911196997,188.070111748977,12.6534397432454,25.2116139237292,37.3698479243432,40.5631294268069,80.3574234585934,118.545760472257,272.756403893609,195.008176778102,41.3471764800819,45.9791091684325,24.2387963634202,38.4257523333025,48.8102546848438,51.3351137228286,69.4879850310193,83.1264137414629,58.7959765615227,62.2376959554081,27.7877262728134,16.6693043369944,27.0748205882394,38.8693678372659,43.5859212873853,49.5066813534467,49.4998335545399,38.4907395685085,38.1468201180029,35.8182439569507,40.3192409186596,44.9300702269257,41.1516755936999,43.2544334237046,38.983152295901,33.000661682633,34.2449323391997,114.725574109297,6.65957860122194,4.03712354742641,6.04384618910682,32.0694726093436,23.6479919068489,19.9635270451319,19.2931541171159,14.5455910170255,50.827665835536,57.5406545633971,66.45587955897,54.3056056206053,32.1988784292202,24.9279986138601,35.1011700120539,31.9728054289197,33.9856806738153,24.3347346523355,14.4264413142006,17.1580695562443,31.5857170645148,62.2353195694833,68.9627305046062,126.85202083051,133.570283408771,130.008121117742,120.665622806523,119.020386740749,128.007046444571,132.792944335798,117.145525844823,125.745399323163,117.283227607362,111.452723760239,104.411777676315,105.328434373183,110.851107316089,122.322302631684,150.176732544812,125.475394954652,124.702127342449,133.864049718375,128.741632408172,127.17575566119,130.793500604032,134.1655528333,113.53223917514,126.818153394649,117.09276288856,105.005778212351,109.264688526307,123.484662425215,105.519916206684,46.9643886523338,128.89631625342,127.633406104689,103.104410985107,128.384205927558,152.337168002617
|short_description=p2@Acat1
}}
}}

Latest revision as of 20:21, 26 September 2015

Short description:p2@Acat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Acat1_5end
Coexpression cluster:MCL_coexpression_mm9:96
Association with transcript: 1bp_to_ENSMUST00000167130_5end
EntrezGene:Acat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Acat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I343.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I440.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.43
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.82
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A350.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H252.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I949.89
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D171.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D249.78
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I133.60
GP2+ M cell, pool3.CNhs13240.11847-124I230.60
Ileum epithelium, pool1.CNhs13199.10252-104B930.40
Ileum epithelium, pool2.CNhs13232.10253-104C136.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F546.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F652.36
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F744.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H141.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H331.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.79
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.09
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.54
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C320.43
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.13
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F164.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D572.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D631.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.21
Mouse Schwann, donor1.CNhs12507.11728-123D915.75
Mouse Schwann, donor2.CNhs12573.11746-123F919.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7302.87
Mouse hepatocyte, donor1.CNhs13078.11714-123C4244.79
Mouse hepatocyte, donor3.CNhs12615.11637-122C8673.01
Mouse hepatocyte, donor6.CNhs13090.11822-124F4564.66
Mouse hepatocyte, donor8.CNhs13091.11824-124F6534.94
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7307.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I736.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.27
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6409.81
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D740.97
adrenal gland, embryo E14.CNhs11038.406-44C554.13
adrenal gland, embryo E16.CNhs11004.1254-43D684.34
adrenal gland, embryo E17.CNhs11043.1263-45I176.56
adrenal gland, embryo E18.CNhs11026.1262-18F597.22
adrenal gland, neonate N00.CNhs11191.1311-23C187.02
adrenal gland, neonate N25.CNhs11223.1377-27I3131.70
amnion, adult pregnant day17.5.CNhs10488.583-22A835.84
aorta, adult.CNhs10498.46-23H1347.47
bone (os femoris), adult.CNhs10483.56-12G231.85
bone (os femoris), neonate N02.CNhs11227.1985-43F586.71
bone (os femoris), neonate N16.CNhs11225.1525-43A653.22
bone (os femoris), neonate N20.CNhs11195.1350-25C345.58
cecum, adult.CNhs10467.37-13H454.05
cerebellum, adult.CNhs10494.15-8B228.40
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H764.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C749.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D147.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D448.29
corpora quadrigemina, adult.CNhs10501.16-22A432.35
corpus striatum, adult.CNhs10487.19-21D833.40
corpus striatum, neonate N00.CNhs11226.630-43F139.83
cortex, adult.CNhs10473.12-14D531.29
cortex, neonate N30.CNhs11107.1392-42F236.57
diencephalon, adult.CNhs10482.20-12F235.53
diencephalon, neonate N30.CNhs11201.1388-42B238.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A243.92
epididymis, adult.CNhs10490.58-23B234.62
eyeball, adult.CNhs10484.31-12G4123.74
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E218.16
eyeball, embryo E15.CNhs10593.426-16C926.29
eyeball, embryo E17.CNhs11023.1261-18D436.92
eyeball, neonate N00.CNhs11207.633-15C620.21
eyeball, neonate N01.CNhs11140.1532-43E732.41
eyeball, neonate N02.CNhs11205.1551-44G829.98
eyeball, neonate N16.CNhs11188.777-19A265.45
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E224.11
forelimb, embryo E14.CNhs10577.413-26A843.40
forelimb, embryo E15.CNhs11007.437-20E750.88
forelimb, embryo E17.CNhs10598.1517-43C448.41
forelimb, embryo E18.CNhs11008.1520-43B557.00
gonad, embryo E13.CNhs11044.1564-45I632.04
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C864.60
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D248.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D547.74
heart, embryo E11.CNhs10586.331-24E956.96
heart, embryo E12.CNhs11015.353-12F579.04
heart, embryo E13.CNhs11013.376-3I978.69
heart, embryo E14.CNhs10597.403-26D476.23
heart, embryo E15.CNhs11017.431-16C8101.53
heart, embryo E16.CNhs11021.457-17C6135.29
heart, embryo E17.CNhs11025.479-18E5146.96
heart, embryo E18.CNhs11030.1283-20G3150.50
heart, neonate N00.CNhs11213.639-21E3152.73
heart, neonate N03.CNhs11221.1349-25I2221.66
heart, neonate N10.CNhs11118.749-24G1313.72
heart, neonate N16.CNhs11209.782-15G1376.00
heart, neonate N20.CNhs11127.821-26I6430.27
heart, neonate N25.CNhs11196.1351-25D3326.91
heart, neonate N30.CNhs11202.1390-42D2308.94
hippocampus, adult.CNhs10478.13-16E831.33
hippocampus, neonate N00.CNhs11228.627-43G149.50
intestinal mucosa, adult.CNhs10506.860-29I3125.89
intestine, adult.CNhs10496.178-9A340.20
intestine, embryo E12.CNhs11019.1251-16I518.77
intestine, embryo E13.CNhs11010.381-16D524.62
intestine, embryo E15.CNhs10602.976-16D833.12
intestine, embryo E16.CNhs10585.463-22H462.93
intestine, embryo E17.CNhs10582.482-18D3104.96
intestine, embryo E18.CNhs10526.1289-20F7156.37
intestine, neonate N00.CNhs11126.644-26D1104.40
intestine, neonate N01.CNhs11192.1322-23E9130.94
intestine, neonate N06.CNhs11102.688-20B8338.30
intestine, neonate N07.CNhs11095.720-20F2379.61
intestine, neonate N10.CNhs11098.755-23A5365.36
intestine, neonate N20.CNhs11187.827-18D1114.15
intestine, neonate N25.CNhs11121.1352-25E397.26
intestine, neonate N30.CNhs11131.1384-42G1104.35
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F831.65
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I239.92
kidney, embryo E18.CNhs11001.1288-20C747.32
kidney, neonate N00.CNhs11214.646-21G752.53
kidney, neonate N10.CNhs11206.758-6D587.52
kidney, neonate N20.CNhs11113.832-19I1193.37
kidney, neonate N25.CNhs11122.1353-25F3212.58
kidney, neonate N30.CNhs11203.1385-42H1195.58
liver, adult pregnant day01.CNhs10466.508-5B2534.50
liver, embryo E12.CNhs10601.355-15F821.02
liver, embryo E13.CNhs10524.378-3H629.48
liver, embryo E14.CNhs10594.409-16E142.72
liver, embryo E15.CNhs10520.433-16D794.33
liver, embryo E16.CNhs10523.462-17F5165.45
liver, embryo E17.CNhs10510.481-18A3295.62
liver, embryo E18.CNhs10579.499-43G4525.33
liver, neonate N00.CNhs11117.641-24F4344.38
liver, neonate N03.CNhs11123.1345-25G21103.46
liver, neonate N06.CNhs11101.684-20A81230.66
liver, neonate N07.CNhs11103.716-20H21703.66
liver, neonate N10.CNhs11115.751-24B91824.17
liver, neonate N20.CNhs11220.823-25A3724.14
liver, neonate N25.CNhs11198.1368-26H1579.63
liver, neonate N30.CNhs11106.1382-42D1547.09
lung, adult.CNhs10474.28-22B127.34
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F829.99
lung, embryo E15.CNhs11020.432-17C528.35
lung, embryo E16.CNhs10998.458-17B631.21
lung, embryo E17.CNhs10605.480-44A628.98
lung, embryo E18.CNhs10583.1287-20I644.04
lung, neonate N00.CNhs11224.640-42C623.81
lung, neonate N06.CNhs11212.683-20E532.95
lung, neonate N07.CNhs11111.715-19A333.00
lung, neonate N10.CNhs11219.750-23E632.69
lung, neonate N20.CNhs11109.822-18A437.20
lung, neonate N25.CNhs11119.1359-25C737.30
lung, neonate N30.CNhs11133.1394-42H227.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B681.63
mammary gland, adult pregnant day19.CNhs10476.588-5H259.33
medulla oblongata, adult.CNhs10477.17-12C250.41
medulla oblongata, neonate N30.CNhs11200.1396-42A351.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C774.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2102.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.27
olfactory brain, adult.CNhs10489.18-22I925.06
ovary, adult.CNhs10507.91-2I757.63
ovary, embryo E18.CNhs11040.505-44H750.93
ovary, neonate N00.CNhs11217.1299-22I432.41
oviduct, adult pregnant day01.CNhs10500.988-6G620.79
pancreas, adult.CNhs10486.34-16E498.23
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F231.14
pancreas, embryo E16.CNhs11003.460-26E552.62
pancreas, embryo E17.CNhs10599.1558-45G346.36
pancreas, embryo E18.CNhs10580.1535-43I759.33
pancreas, neonate N00.CNhs11105.645-26G998.46
pancreas, neonate N01.CNhs11138.1531-43D793.06
pancreas, neonate N02.CNhs11139.1539-43D8115.15
pancreas, neonate N16.CNhs11136.787-43B6122.31
pancreas, neonate N25.CNhs11094.1555-45E281.17
pancreas, neonate N30.CNhs11182.1548-44H584.57
pituitary gland, adult.CNhs10493.21-1G834.72
pituitary gland, embryo E12.CNhs11018.346-16E611.70
pituitary gland, embryo E13.CNhs11009.370-44C719.27
pituitary gland, embryo E14.CNhs11037.398-44A528.08
pituitary gland, embryo E15.CNhs10592.427-16B933.34
pituitary gland, embryo E16.CNhs11036.449-43F632.82
pituitary gland, embryo E17.CNhs11039.1265-44F540.31
pituitary gland, neonate N00.CNhs11190.1308-22E925.27
placenta, adult pregnant day10.CNhs10472.539-13I714.78
placenta, adult pregnant day17.CNhs10464.577-18G319.28
prostate, adult.CNhs10470.859-1F839.47
skin, adult.CNhs10492.30-1C340.89
skin, neonate N00.CNhs11124.650-25G446.02
skin, neonate N03.CNhs11215.662-22H366.89
skin, neonate N06.CNhs11097.693-20I562.91
skin, neonate N10.CNhs11108.762-6C459.09
small intestine, neonate N16.CNhs11114.790-21I1161.48
spinal cord, adult.CNhs10505.24-13C945.24
spleen, adult.CNhs10465.25-2G220.33
spleen, embryo E16.CNhs11035.461-43C141.69
spleen, embryo E18.CNhs11011.1271-21F235.19
spleen, neonate N10.CNhs11116.752-24D126.94
spleen, neonate N20.CNhs11112.824-19H124.74
spleen, neonate N25.CNhs11099.1354-25G324.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C950.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D346.85
stomach, adult.CNhs10503.33-1H6188.07
stomach, embryo E12.CNhs10588.356-43E312.65
stomach, embryo E15.CNhs10603.1252-16G825.21
stomach, embryo E16.CNhs11022.459-17D437.37
stomach, embryo E17.CNhs11006.1035-18D540.56
stomach, embryo E18.CNhs10999.1286-20C680.36
stomach, neonate N03.CNhs11193.1340-24B8118.55
stomach, neonate N07.CNhs11210.718-18A9272.76
stomach, neonate N25.CNhs11104.1355-25E4195.01
stomach, neonate N30.CNhs11134.1386-42I141.35
submandibular gland, adult.CNhs10469.59-29C145.98
testis, adult.CNhs10504.57-7G524.24
testis, embryo E13.CNhs11031.389-23F538.43
testis, embryo E15.CNhs11034.443-27C548.81
testis, embryo E16.CNhs11033.470-26G551.34
testis, embryo E17.CNhs11029.486-18I569.49
testis, embryo E18.CNhs11027.503-18G583.13
testis, neonate N00.CNhs11189.1300-22B758.80
testis, neonate N07.CNhs11222.726-26I462.24
testis, neonate N10.CNhs11204.763-44D927.79
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E227.07
thymus, adult.CNhs10471.38-12B538.87
thymus, embryo E14.CNhs11041.402-44I443.59
thymus, embryo E15.CNhs11005.430-45I249.51
thymus, embryo E16.CNhs11002.456-26C549.50
thymus, embryo E17.CNhs10581.478-18C138.49
thymus, embryo E18.CNhs10595.1273-19G438.15
thymus, neonate N02.CNhs11181.1541-43F835.82
thymus, neonate N03.CNhs11137.2104-43C740.32
thymus, neonate N06.CNhs11197.681-26C444.93
thymus, neonate N07.CNhs11211.713-19D341.15
thymus, neonate N10.CNhs11194.748-24E443.25
thymus, neonate N20.CNhs11186.820-7A238.98
thymus, neonate N25.CNhs11125.1362-25G733.00
thymus, neonate N30.CNhs11132.1393-42G234.24
tongue, adult.CNhs10499.32-1B4114.73
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E432.07
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E519.96
vagina, adult.CNhs10502.89-27D519.29
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A257.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A366.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I814.43
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H231.59
whole body, embryo E14.5.CNhs10578.420-27D262.24
whole body, embryo E14.CNhs10519.395-14B168.96
whole body, embryo E16.CNhs10514.453-14F2126.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5133.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5130.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5120.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5119.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5128.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5132.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5117.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5125.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5117.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5111.45
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5104.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5105.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5110.85
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5122.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5150.18
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5125.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5124.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5133.86
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5128.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5127.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5130.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5134.17
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5113.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5126.82
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5117.09
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5105.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5109.26
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5123.48
whole body, embryo E17.5.CNhs10513.490-9F9105.52
whole body, embryo E17.CNhs10517.475-3I546.96
whole body, embryo E18.CNhs10516.493-3B3128.90
whole body, neonate N00.CNhs10525.657-19C2127.63
whole body, neonate N01.CNhs10576.659-23C6103.10
whole body, neonate N06.CNhs10515.692-21D1128.38
whole body, neonate N10.CNhs10518.761-6B4152.34





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube7.14e-1047
exocrine gland1.19e-0825
exocrine system1.19e-0825
liver1.31e-0822
epithelial sac1.31e-0822
digestive gland1.31e-0822
epithelium of foregut-midgut junction1.31e-0822
anatomical boundary1.31e-0822
hepatobiliary system1.31e-0822
foregut-midgut junction1.31e-0822
hepatic diverticulum1.31e-0822
liver primordium1.31e-0822
septum transversum1.31e-0822
liver bud1.31e-0822
digestive tract diverticulum1.34e-0823
sac1.34e-0823
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:53418390..53418433,-&oldid=4272291"