FFCP PHASE1:Mm9::chr9:98936066..98936095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382097 | |EntrezGene=382097 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=Q1RME4 | |UniProt=Q1RME4 | ||
|association_with_transcript=13bp_to_ENSMUST00000076730,NM_001080776,uc009rdu.1_5end | |||
|cluster_id=chr9:98936066..98936095,- | |||
|description=CAGE_peak_2_at_Gm1123_5end | |||
|id=chr9:98936066..98936095,- | |||
|ontology_enrichment_celltype=CL:0002563!4.66e-13!9;CL:0002251!4.66e-13!9;CL:0000239!5.56e-09!6;CL:0000677!5.56e-09!6;CL:0000212!5.56e-09!6;CL:0000584!5.56e-09!6;CL:0000075!1.56e-07!7;CL:0002076!6.89e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.19e-19,9;CL:0002251,3.19e-19,9;CL:0000239,5.86e-13,6;CL:0000677,5.86e-13,6;CL:0000584,5.86e-13,6;CL:0000075,5.38e-11,7;CL:0002076,8.71e-11,15;CL:0000066,1.31e-10,25;CL:0002250,7.57e-08,3;CL:0000223,1.23e-07,20;CL:0000682,1.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.23e-24!43;UBERON:0005409!5.97e-22!59;UBERON:0000344!6.64e-22!15;UBERON:0001242!5.49e-19!13;UBERON:0000060!5.49e-19!13;UBERON:0001262!5.49e-19!13;UBERON:0004786!5.49e-19!13;UBERON:0004923!2.71e-13!24;UBERON:0003350!4.66e-13!9;UBERON:0004808!4.66e-13!9;UBERON:0001277!4.66e-13!9;UBERON:0000485!3.07e-10!11;UBERON:0004119!2.92e-07!130;UBERON:0000925!2.92e-07!130;UBERON:0006595!2.92e-07!130;UBERON:0001007!5.38e-07!128;UBERON:0001555!5.38e-07!128;UBERON:0007026!5.38e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.39e-54,31;UBERON:0005409,4.90e-41,47;UBERON:0000344,7.45e-33,15;UBERON:0001242,2.35e-28,13;UBERON:0001262,2.35e-28,13;UBERON:0004786,2.35e-28,13;UBERON:0003350,3.19e-19,9;UBERON:0004808,3.19e-19,9;UBERON:0001277,3.19e-19,9;UBERON:0004923,4.72e-19,24;UBERON:0000485,2.19e-15,11;UBERON:0001007,1.49e-14,116;UBERON:0001555,1.49e-14,116;UBERON:0007026,1.49e-14,116;UBERON:0004119,3.59e-14,118;UBERON:0000925,3.59e-14,118;UBERON:0006595,3.59e-14,118;UBERON:0004921,1.86e-12,114;UBERON:0002108,3.58e-10,4;UBERON:0000331,2.27e-08,3;UBERON:0002116,2.27e-08,3;UBERON:0001204,2.27e-08,3;UBERON:0001168,2.27e-08,3 | |||
|phase1_expression=0,30.0118850569851,40.9499315450582,30.246421130683,38.0680754759224,82.4287225087379,96.7156332065476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.355105124541,108.051771382637,43.0673973086265,62.4604894430658,65.934197201882,205.795363271253,168.104096549874,119.512745243209,0,0,0,94.1656280389155,88.104362040001,90.8553635367543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,15.300639882354,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,24.2309289583559,0,0,102.438279138645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.270597049239,60.8236303326152,0,0,1.67527699718721,6.45387278794696,11.3412802360884,16.9300807240178,40.3349702312835,24.5401442538776,16.3367885720175,11.3405189063456,11.5028811400281,44.9409704327111,55.9797549175458,64.9200550809237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,39.0584321084,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48412283890143,0.418176592028937,1.74690050996942,0,0.247960367176008,0,11.5357326229696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.128050304809739,0.631790158511746,0,0,0.192909220463705,0.824171801606613,0.441596760403192,0,1.24233064311536,0,0,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.711810108745045,0.0985044823755635,0,0.154936841185966,1.15743966588685,0,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0,30.0118850569851,40.9499315450582,30.246421130683,38.0680754759224,82.4287225087379,96.7156332065476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.355105124541,108.051771382637,43.0673973086265,62.4604894430658,65.934197201882,205.795363271253,168.104096549874,119.512745243209,0,0,0,94.1656280389155,88.104362040001,90.8553635367543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,15.300639882354,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,24.2309289583559,0,0,102.438279138645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.270597049239,60.8236303326152,0,0,1.67527699718721,6.45387278794696,11.3412802360884,16.9300807240178,40.3349702312835,24.5401442538776,16.3367885720175,11.3405189063456,11.5028811400281,44.9409704327111,55.9797549175458,64.9200550809237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,39.0584321084,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48412283890143,0.418176592028937,1.74690050996942,0,0.247960367176008,0,11.5357326229696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.128050304809739,0.631790158511746,0,0,0.192909220463705,0.824171801606613,0.441596760403192,0,1.24233064311536,0,0,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.711810108745045,0.0985044823755635,0,0.154936841185966,1.15743966588685,0,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p2@Gm1123 | |||
}} | }} |
Latest revision as of 07:35, 27 September 2015
Short description: | p2@Gm1123 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm1123_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 13bp_to_ENSMUST00000076730, NM_001080776, uc009rdu.1_5end |
EntrezGene: | Gm1123 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.19e-19 | 9 |
epithelial cell of alimentary canal | 3.19e-19 | 9 |
brush border epithelial cell | 5.86e-13 | 6 |
gut absorptive cell | 5.86e-13 | 6 |
enterocyte | 5.86e-13 | 6 |
columnar/cuboidal epithelial cell | 5.38e-11 | 7 |
endo-epithelial cell | 8.71e-11 | 15 |
epithelial cell | 1.31e-10 | 25 |
intestinal crypt stem cell | 7.57e-08 | 3 |
endodermal cell | 1.23e-07 | 20 |
M cell of gut | 1.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.39e-54 | 31 |
gastrointestinal system | 4.90e-41 | 47 |
mucosa | 7.45e-33 | 15 |
intestinal mucosa | 2.35e-28 | 13 |
wall of intestine | 2.35e-28 | 13 |
gastrointestinal system mucosa | 2.35e-28 | 13 |
epithelium of mucosa | 3.19e-19 | 9 |
gastrointestinal system epithelium | 3.19e-19 | 9 |
intestinal epithelium | 3.19e-19 | 9 |
organ component layer | 4.72e-19 | 24 |
simple columnar epithelium | 2.19e-15 | 11 |
digestive system | 1.49e-14 | 116 |
digestive tract | 1.49e-14 | 116 |
primitive gut | 1.49e-14 | 116 |
endoderm-derived structure | 3.59e-14 | 118 |
endoderm | 3.59e-14 | 118 |
presumptive endoderm | 3.59e-14 | 118 |
subdivision of digestive tract | 1.86e-12 | 114 |
small intestine | 3.58e-10 | 4 |
ileal mucosa | 2.27e-08 | 3 |
ileum | 2.27e-08 | 3 |
mucosa of small intestine | 2.27e-08 | 3 |
wall of small intestine | 2.27e-08 | 3 |