FFCP PHASE1:Mm9::chr11:102749254..102749263,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102749254..102749263,- | |||
|description=CAGE_peak_at_chr11:102749254..102749263,- | |description=CAGE_peak_at_chr11:102749254..102749263,- | ||
|id=chr11:102749254..102749263,- | |id=chr11:102749254..102749263,- | ||
|ontology_enrichment_celltype=CL:0002453!6.25e-17!8;CL:0002319!1.65e-16!43;CL:0000221!4.54e-16!44;CL:0000133!4.54e-16!44;CL:0000055!8.56e-14!50;CL:0000333!1.99e-13!10;CL:0000095!1.99e-13!10;CL:0000243!1.99e-13!10;CL:0000123!1.99e-13!10;CL:0000125!1.99e-13!10;CL:0000030!1.99e-13!10;CL:0000339!1.99e-13!10;CL:0002614!1.85e-11!3;CL:0000128!2.78e-10!6;CL:0000126!2.78e-10!6;CL:0000127!2.78e-10!6;CL:0000864!4.93e-09!2;CL:0000878!4.93e-09!2;CL:0000129!4.93e-09!2;CL:0002321!5.01e-09!70;CL:0000220!5.01e-09!70;CL:0000117!5.58e-09!23;CL:0000337!5.58e-09!23;CL:0002604!6.99e-09!2;CL:0002605!6.99e-09!2;CL:0002611!1.17e-08!2;CL:0000540!2.08e-07!33;CL:0000047!2.08e-07!33;CL:0000031!2.08e-07!33;CL:0000404!2.08e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.66e-54,8;CL:0000333,8.43e-44,10;CL:0000095,8.43e-44,10;CL:0000243,8.43e-44,10;CL:0000123,8.43e-44,10;CL:0000125,8.43e-44,10;CL:0000030,8.43e-44,10;CL:0000339,8.43e-44,10;CL:0000878,4.23e-36,2;CL:0000129,4.23e-36,2;CL:0002605,2.13e-35,2;CL:0002604,2.13e-35,2;CL:0000128,1.55e-26,6;CL:0000126,1.55e-26,6;CL:0000127,1.55e-26,6;CL:0002194,1.16e-18,4;CL:0000766,1.16e-18,4;CL:0000234,1.16e-18,4;CL:0000576,1.16e-18,4;CL:0000235,1.16e-18,4;CL:0000864,1.16e-18,4;CL:0002009,1.16e-18,4;CL:0000040,1.16e-18,4;CL:0000559,1.16e-18,4;CL:0000473,3.95e-11,7;CL:0000557,3.95e-11,7;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0000219,1.10e-08,54;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.68e-20!6;UBERON:0001017!2.34e-18!73;UBERON:0005743!2.34e-18!73;UBERON:0003076!3.43e-18!12;UBERON:0003057!3.43e-18!12;UBERON:0000073!9.13e-18!75;UBERON:0001016!9.13e-18!75;UBERON:0002240!1.68e-15!6;UBERON:0005174!1.68e-15!6;UBERON:0001137!1.68e-15!6;UBERON:0001049!7.23e-15!52;UBERON:0005068!7.23e-15!52;UBERON:0006241!7.23e-15!52;UBERON:0007135!7.23e-15!52;UBERON:0002950!2.65e-14!4;UBERON:0001891!2.65e-14!4;UBERON:0009616!2.65e-14!4;UBERON:0004121!1.82e-13!102;UBERON:0000924!1.82e-13!102;UBERON:0006601!1.82e-13!102;UBERON:0002346!4.37e-13!71;UBERON:0003075!4.37e-13!71;UBERON:0007284!4.37e-13!71;UBERON:0001948!3.53e-12!5;UBERON:0002315!3.53e-12!5;UBERON:0002038!1.85e-11!3;UBERON:0002308!1.85e-11!3;UBERON:0009663!1.85e-11!3;UBERON:0009661!1.85e-11!3;UBERON:0006331!1.85e-11!3;UBERON:0000125!1.85e-11!3;UBERON:0002020!2.72e-11!34;UBERON:0002256!1.17e-08!2;UBERON:0002616!2.84e-08!49;UBERON:0000955!4.58e-08!50;UBERON:0006238!4.58e-08!50;UBERON:0001896!7.88e-08!2;UBERON:0005290!7.88e-08!2;UBERON:0010096!7.88e-08!2;UBERON:0002420!1.97e-07!8;UBERON:0007245!1.97e-07!8;UBERON:0010009!1.97e-07!8;UBERON:0010011!1.97e-07!8;UBERON:0000454!1.97e-07!8;UBERON:0000033!4.15e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,6.26e-11,7;UBERON:0003022,6.26e-11,7;UBERON:0002421,6.26e-11,7;UBERON:0000349,6.26e-11,7;UBERON:0002600,6.26e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,4.61340983742391,2.91644848611425,1.25987779462826,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,5.69240209984969,8.83702102239575,0,0,0,0.856952953211411,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,4.61340983742391,2.91644848611425,1.25987779462826,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,5.69240209984969,8.83702102239575,0,0,0,0.856952953211411,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:102749254..102749263,- | |short_description=p@chr11:102749254..102749263,- | ||
}} | }} |
Latest revision as of 05:52, 5 August 2015
Short description: | p@chr11:102749254..102749263, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102749254..102749263, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.66e-54 | 8 |
migratory neural crest cell | 8.43e-44 | 10 |
neuron associated cell | 8.43e-44 | 10 |
glial cell (sensu Vertebrata) | 8.43e-44 | 10 |
neuron associated cell (sensu Vertebrata) | 8.43e-44 | 10 |
glial cell | 8.43e-44 | 10 |
glioblast | 8.43e-44 | 10 |
glioblast (sensu Vertebrata) | 8.43e-44 | 10 |
central nervous system macrophage | 4.23e-36 | 2 |
microglial cell | 4.23e-36 | 2 |
astrocyte of the cerebral cortex | 2.13e-35 | 2 |
astrocyte of the hippocampus | 2.13e-35 | 2 |
oligodendrocyte | 1.55e-26 | 6 |
macroglial cell | 1.55e-26 | 6 |
astrocyte | 1.55e-26 | 6 |
monopoietic cell | 1.16e-18 | 4 |
myeloid leukocyte | 1.16e-18 | 4 |
phagocyte | 1.16e-18 | 4 |
monocyte | 1.16e-18 | 4 |
macrophage | 1.16e-18 | 4 |
tissue-resident macrophage | 1.16e-18 | 4 |
macrophage dendritic cell progenitor | 1.16e-18 | 4 |
monoblast | 1.16e-18 | 4 |
promonocyte | 1.16e-18 | 4 |
defensive cell | 3.95e-11 | 7 |
granulocyte monocyte progenitor cell | 3.95e-11 | 7 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
motile cell | 1.10e-08 | 54 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 6.26e-11 | 7 |
lobe parts of cerebral cortex | 6.26e-11 | 7 |
hippocampal formation | 6.26e-11 | 7 |
limbic system | 6.26e-11 | 7 |
limbic lobe | 6.26e-11 | 7 |