FFCP PHASE1:Mm9::chr11:109287281..109287324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13929 | |EntrezGene=13929 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=B1AT60 | |UniProt=B1AT60 | ||
|association_with_transcript=0bp_to_ENSMUST00000020929,ENSMUST00000125108_5end | |association_with_transcript=0bp_to_ENSMUST00000020929,ENSMUST00000125108_5end | ||
|cluster_id=chr11:109287281..109287324,+ | |||
|description=CAGE_peak_1_at_Amz2_5end | |description=CAGE_peak_1_at_Amz2_5end | ||
|id=chr11:109287281..109287324,+ | |id=chr11:109287281..109287324,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.89e-14!63;UBERON:0003056!8.16e-14!49;UBERON:0001049!1.36e-12!52;UBERON:0005068!1.36e-12!52;UBERON:0006241!1.36e-12!52;UBERON:0007135!1.36e-12!52;UBERON:0002346!5.08e-12!71;UBERON:0003075!5.08e-12!71;UBERON:0007284!5.08e-12!71;UBERON:0003080!2.61e-11!40;UBERON:0000955!5.20e-11!50;UBERON:0006238!5.20e-11!50;UBERON:0002780!5.25e-11!39;UBERON:0001890!5.25e-11!39;UBERON:0006240!5.25e-11!39;UBERON:0000153!7.65e-11!94;UBERON:0002616!1.25e-10!49;UBERON:0000468!1.27e-10!333;UBERON:0002020!5.52e-10!34;UBERON:0002791!2.81e-09!29;UBERON:0003528!2.81e-09!29;UBERON:0001893!2.81e-09!29;UBERON:0007811!2.94e-09!86;UBERON:0004121!1.66e-08!102;UBERON:0000924!1.66e-08!102;UBERON:0006601!1.66e-08!102;UBERON:0000956!6.94e-08!21;UBERON:0001869!6.94e-08!21;UBERON:0000203!6.94e-08!21;UBERON:0001017!1.78e-07!73;UBERON:0005743!1.78e-07!73;UBERON:0000922!2.46e-07!328;UBERON:0000073!5.71e-07!75;UBERON:0001016!5.71e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,8.16e-14,49;UBERON:0002346,3.05e-13,64;UBERON:0003075,3.05e-13,64;UBERON:0007284,3.05e-13,64;UBERON:0010371,7.19e-13,73;UBERON:0001049,1.36e-12,52;UBERON:0005068,1.36e-12,52;UBERON:0006241,1.36e-12,52;UBERON:0007135,1.36e-12,52;UBERON:0010314,3.04e-12,92;UBERON:0000955,9.22e-12,47;UBERON:0006238,9.22e-12,47;UBERON:0000073,1.77e-11,54;UBERON:0002616,2.27e-11,46;UBERON:0003080,2.61e-11,40;UBERON:0002780,5.25e-11,39;UBERON:0001890,5.25e-11,39;UBERON:0006240,5.25e-11,39;UBERON:0002020,5.52e-10,34;UBERON:0003528,2.81e-09,29;UBERON:0002791,2.81e-09,29;UBERON:0001893,2.81e-09,29;UBERON:0004121,4.48e-09,95;UBERON:0000924,4.48e-09,95;UBERON:0006601,4.48e-09,95;UBERON:0000956,6.94e-08,21;UBERON:0001869,6.94e-08,21;UBERON:0000203,6.94e-08,21;UBERON:0001017,1.78e-07,73;UBERON:0001016,5.71e-07,75 | |||
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| ||
|short_description=p1@Amz2 | |short_description=p1@Amz2 | ||
}} | }} |
Latest revision as of 21:33, 26 September 2015
Short description: | p1@Amz2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Amz2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000020929, ENSMUST00000125108_5end |
EntrezGene: | Amz2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 8.16e-14 | 49 |
neurectoderm | 3.05e-13 | 64 |
neural plate | 3.05e-13 | 64 |
presumptive neural plate | 3.05e-13 | 64 |
ecto-epithelium | 7.19e-13 | 73 |
neural tube | 1.36e-12 | 52 |
neural rod | 1.36e-12 | 52 |
future spinal cord | 1.36e-12 | 52 |
neural keel | 1.36e-12 | 52 |
structure with developmental contribution from neural crest | 3.04e-12 | 92 |
brain | 9.22e-12 | 47 |
future brain | 9.22e-12 | 47 |
regional part of nervous system | 1.77e-11 | 54 |
regional part of brain | 2.27e-11 | 46 |
anterior neural tube | 2.61e-11 | 40 |
regional part of forebrain | 5.25e-11 | 39 |
forebrain | 5.25e-11 | 39 |
future forebrain | 5.25e-11 | 39 |
gray matter | 5.52e-10 | 34 |
brain grey matter | 2.81e-09 | 29 |
regional part of telencephalon | 2.81e-09 | 29 |
telencephalon | 2.81e-09 | 29 |
ectoderm-derived structure | 4.48e-09 | 95 |
ectoderm | 4.48e-09 | 95 |
presumptive ectoderm | 4.48e-09 | 95 |
cerebral cortex | 6.94e-08 | 21 |
cerebral hemisphere | 6.94e-08 | 21 |
pallium | 6.94e-08 | 21 |
central nervous system | 1.78e-07 | 73 |
nervous system | 5.71e-07 | 75 |