FFCP PHASE1:Mm9::chr11:70323682..70323701,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75604 | |EntrezGene=75604 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENSMUST00000141924_5end | |association_with_transcript=-6bp_to_ENSMUST00000141924_5end | ||
|cluster_id=chr11:70323682..70323701,+ | |||
|description=CAGE_peak_4_at_Tm4sf5_5end | |description=CAGE_peak_4_at_Tm4sf5_5end | ||
|id=chr11:70323682..70323701,+ | |id=chr11:70323682..70323701,+ | ||
|ontology_enrichment_celltype=CL:0000075!1.24e-07!7;CL:0000239!4.32e-07!6;CL:0000677!4.32e-07!6;CL:0000212!4.32e-07!6;CL:0000584!4.32e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.14e-15,3;CL:0000239,6.32e-13,6;CL:0000677,6.32e-13,6;CL:0000584,6.32e-13,6;CL:0000075,4.18e-11,7;CL:0000066,9.54e-09,25;CL:0002563,1.14e-08,9;CL:0002251,1.14e-08,9;CL:0000473,7.24e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.15e-12!23;UBERON:0000974!9.15e-12!23;UBERON:0004807!9.15e-12!23;UBERON:0005058!9.15e-12!23;UBERON:0003351!9.15e-12!23;UBERON:0009113!9.15e-12!23;UBERON:0003295!9.15e-12!23;UBERON:0009722!9.15e-12!23;UBERON:0005562!9.15e-12!23;UBERON:0007690!9.15e-12!23;UBERON:0006562!5.11e-11!24;UBERON:0003408!5.11e-11!24;UBERON:0001557!5.11e-11!24;UBERON:0001042!5.11e-11!24;UBERON:0008814!5.11e-11!24;UBERON:0009145!5.11e-11!24;UBERON:0000064!8.93e-11!99;UBERON:0000344!2.52e-10!15;UBERON:0000072!3.95e-09!27;UBERON:0004177!6.06e-09!29;UBERON:0001242!3.31e-08!13;UBERON:0000060!3.31e-08!13;UBERON:0001262!3.31e-08!13;UBERON:0004786!3.31e-08!13;UBERON:0004923!9.61e-08!24;UBERON:0000063!1.93e-07!35;UBERON:0003929!3.55e-07!55;UBERON:0000153!7.83e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.91e-19,15;UBERON:0002465,3.71e-15,3;UBERON:0001242,1.48e-12,13;UBERON:0001262,1.48e-12,13;UBERON:0004786,1.48e-12,13;UBERON:0004923,8.68e-12,24;UBERON:0001962,3.40e-11,2;UBERON:0001961,3.40e-11,2;UBERON:0001744,3.40e-11,2;UBERON:0003350,1.14e-08,9;UBERON:0004808,1.14e-08,9;UBERON:0001277,1.14e-08,9;UBERON:0000485,4.09e-07,11;UBERON:0003929,5.42e-07,55;UBERON:0002370,9.90e-07,23;UBERON:0000974,9.90e-07,23;UBERON:0004807,9.90e-07,23;UBERON:0005058,9.90e-07,23;UBERON:0003351,9.90e-07,23;UBERON:0009113,9.90e-07,23;UBERON:0003295,9.90e-07,23;UBERON:0009722,9.90e-07,23;UBERON:0005562,9.90e-07,23;UBERON:0007690,9.90e-07,23 | |||
|phase1_expression=0,4.88565570695105,6.82498859084304,0.30246421130683,0.500895729946347,1.00727563147134,2.56973904655078,1.67860320474049,0.281577444303333,0.234064526321993,0.34243593645101,0.717949430958028,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,13.2793710918528,16.0586496747019,5.7423196411502,5.59990595006797,4.09395342103189,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0.599162557619291,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0,0,0,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0,0,0,0.304464949114599,0,0.63549621259146,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0.258319646955462,0.675824501963113,0.469428954583016,0,0.209718688851422,0.483168241652012,0,1.58005560314089,0.810900861160657,0.616265742988964,0.909445760844565,1.07416017400489,1.98681354781265,0.360586348559907,0.886137163047463,0.706765149637033,0.381034033274999,0.302478555410522,1.36441033035653,1.05833025804362,1.28564592399726,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,4.88565570695105,6.82498859084304,0.30246421130683,0.500895729946347,1.00727563147134,2.56973904655078,1.67860320474049,0.281577444303333,0.234064526321993,0.34243593645101,0.717949430958028,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,13.2793710918528,16.0586496747019,5.7423196411502,5.59990595006797,4.09395342103189,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0.599162557619291,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0,0,0,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0,0,0,0.304464949114599,0,0.63549621259146,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0.258319646955462,0.675824501963113,0.469428954583016,0,0.209718688851422,0.483168241652012,0,1.58005560314089,0.810900861160657,0.616265742988964,0.909445760844565,1.07416017400489,1.98681354781265,0.360586348559907,0.886137163047463,0.706765149637033,0.381034033274999,0.302478555410522,1.36441033035653,1.05833025804362,1.28564592399726,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p4@Tm4sf5 | |short_description=p4@Tm4sf5 | ||
}} | }} |
Latest revision as of 14:41, 25 September 2015
Short description: | p4@Tm4sf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tm4sf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | -6bp_to_ENSMUST00000141924_5end |
EntrezGene: | Tm4sf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.14e-15 | 3 |
brush border epithelial cell | 6.32e-13 | 6 |
gut absorptive cell | 6.32e-13 | 6 |
enterocyte | 6.32e-13 | 6 |
columnar/cuboidal epithelial cell | 4.18e-11 | 7 |
epithelial cell | 9.54e-09 | 25 |
intestinal epithelial cell | 1.14e-08 | 9 |
epithelial cell of alimentary canal | 1.14e-08 | 9 |
defensive cell | 7.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.91e-19 | 15 |
lymphoid system | 3.71e-15 | 3 |
intestinal mucosa | 1.48e-12 | 13 |
wall of intestine | 1.48e-12 | 13 |
gastrointestinal system mucosa | 1.48e-12 | 13 |
organ component layer | 8.68e-12 | 24 |
gut-associated lymphoid tissue | 3.40e-11 | 2 |
mucosa-associated lymphoid tissue | 3.40e-11 | 2 |
lymphoid tissue | 3.40e-11 | 2 |
epithelium of mucosa | 1.14e-08 | 9 |
gastrointestinal system epithelium | 1.14e-08 | 9 |
intestinal epithelium | 1.14e-08 | 9 |
simple columnar epithelium | 4.09e-07 | 11 |
gut epithelium | 5.42e-07 | 55 |
thymus | 9.90e-07 | 23 |
neck | 9.90e-07 | 23 |
respiratory system epithelium | 9.90e-07 | 23 |
hemolymphoid system gland | 9.90e-07 | 23 |
pharyngeal epithelium | 9.90e-07 | 23 |
thymic region | 9.90e-07 | 23 |
pharyngeal gland | 9.90e-07 | 23 |
entire pharyngeal arch endoderm | 9.90e-07 | 23 |
thymus primordium | 9.90e-07 | 23 |
early pharyngeal endoderm | 9.90e-07 | 23 |