Personal tools

FFCP PHASE1:Mm9::chr12:110779189..110779216,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17263
|EntrezGene=17263
|HGNC=
|HGNC=
|MCL_coexpression_id=236
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000124106,ENSMUST00000129245,ENSMUST00000143836,NR_027651,NR_027652,uc007pap.2,uc007paq.2,uc007par.2_5end
|association_with_transcript=0bp_to_ENSMUST00000124106,ENSMUST00000129245,ENSMUST00000143836,NR_027651,NR_027652,uc007pap.2,uc007paq.2,uc007par.2_5end
|cluster_id=chr12:110779189..110779216,+
|description=CAGE_peak_4_at_Meg3_5end
|description=CAGE_peak_4_at_Meg3_5end
|id=chr12:110779189..110779216,+
|id=chr12:110779189..110779216,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.90e-11!71;UBERON:0003075!2.90e-11!71;UBERON:0007284!2.90e-11!71;UBERON:0001049!1.97e-10!52;UBERON:0005068!1.97e-10!52;UBERON:0006241!1.97e-10!52;UBERON:0007135!1.97e-10!52;UBERON:0004121!5.37e-10!102;UBERON:0000924!5.37e-10!102;UBERON:0006601!5.37e-10!102;UBERON:0000955!7.97e-10!50;UBERON:0006238!7.97e-10!50;UBERON:0000033!1.37e-09!63;UBERON:0002616!2.19e-09!49;UBERON:0000468!2.37e-09!333;UBERON:0000073!1.08e-08!75;UBERON:0001016!1.08e-08!75;UBERON:0003056!1.66e-08!49;UBERON:0001017!2.67e-08!73;UBERON:0005743!2.67e-08!73;UBERON:0003080!3.19e-08!40;UBERON:0002780!1.08e-07!39;UBERON:0001890!1.08e-07!39;UBERON:0006240!1.08e-07!39;UBERON:0002020!3.16e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.02e-12,54;UBERON:0001049,2.84e-11,52;UBERON:0005068,2.84e-11,52;UBERON:0006241,2.84e-11,52;UBERON:0007135,2.84e-11,52;UBERON:0002346,3.11e-10,64;UBERON:0003075,3.11e-10,64;UBERON:0007284,3.11e-10,64;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0010371,3.25e-09,73;UBERON:0002616,4.22e-09,46;UBERON:0001016,7.09e-09,75;UBERON:0001017,1.93e-08,73;UBERON:0003080,1.93e-08,40;UBERON:0004121,2.33e-08,95;UBERON:0000924,2.33e-08,95;UBERON:0006601,2.33e-08,95;UBERON:0003056,3.16e-08,49;UBERON:0002780,7.40e-08,39;UBERON:0001890,7.40e-08,39;UBERON:0006240,7.40e-08,39;UBERON:0002021,2.16e-07,10;UBERON:0000411,2.16e-07,10;UBERON:0001950,2.16e-07,10;UBERON:0002020,2.59e-07,34
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.71920063963254,1.54701627683233,2.83243045203437,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0,4.85606673486466,4.8591079009355,1.46988959057945,0.958454710182364,0.919218786610021,4.40463523997555,4.85211884723713,5.68344173048101,3.82470234417562,1.82975287204819,2.6045668527838,3.90856198601933,5.6276261003168,7.33431589328689,9.1334861496837,4.27115042397309,5.59198337475902,2.95332153999418,2.64500460373749,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0.253359865475099,0,0.11418387971906,0,4.30482203287992,1.21439728736295,3.04465478312141,1.15307748628029,1.50722640552623,4.9387256996996,0.753999547978053,4.44950941921873,0,0,12.2942805960031,1.54589062922275,1.45462575940567,0,5.27005434620785,7.54008144528438,0,0,0,0,15.8778077769112,9.15001205637253,2.26177833803156,10.9509321721134,12.0186264945255,8.10373373782284,12.4925772562173,2.34230536855727,0.373220911830279,0.252722758433675,1.05220927943237,0.780722657776222,0.459804208866946,1.26043490863744,3.91832526372859,4.83059143974428,1.40925092313335,1.03071897015702,3.88055056108524,0.215567992932842,2.83659120251729,3.87092473160687,5.91828477554452,2.50242524303038,7.3132954969655,5.35033554660653,1.99034266818493,0,0,0,1.44988040774851,1.17263029990548,0.540186184383045,2.13070262026689,0.787056926989615,0.771335564436891,1.16266972375204,0.804820204198858,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0,11.3556572224629,1.3377599609307,0,0,1.70630600428187,2.09013004674395,2.57734922644187,1.81515172161008,1.77902435075896,0.570676878337677,0,0,2.26201687920243,0.596869416123452,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.02823661348756,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,1.50160595144485,1.96558995113203,2.24862112384854,3.24576194221605,6.27060615356284,2.80088436959562,1.43848068725405,0.648540907100142,2.19649130550465,0,2.60498663367952,0.936113019343682,0,0,0,0,0.757965647081939,2.28150967018836,1.52770577197669,1.17345124144251,1.50755631697634,2.61848004974615,5.46374214001837,0.630540576424764,1.55025282754142,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,7.86697890940181,10.7834751664827,0.163934945376675,2.27223834483936,0.94652465824877,0.390438744296638,1.72338718186239,0,1.11399337041197,0,0,1.16902343164525,0.790575555893047,9.3183181762324,0.141940085208269,1.95872164033981,1.95464351224291,0.494910368917606,0,0.242780636154981,3.32555912661226,4.71512699389745,2.06711325016541,4.91896236710284,1.80899805217755,3.27180356529755,3.20847640546249,0.632073515871632,2.10837217149998,0,17.0219802876894,1.62054984628179,2.06973894052407,1.28602221018955,7.44828981297549,1.60531935841864,2.63278432963394,1.2178597964584,0.704015124191131,2.33015277950202,0,0.49465875882444,5.8127193610526,3.31721087104857,0.835606408021955,1.96969079694074,0,5.56275906031529,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0.276399947608848,0.954670618015114,0.632671987162271,2.23651413839534,0.86404272657441,1.88179466413022,0.436725127492355,2.15782954215713,2.39695021603474,0.523511883968059,0.259229946583586,0,0,1.04661582230785,0.66183396182839,1.16670713006429,0.387479470433193,1.85851738039856,1.64300134104056,1.3020438484395,0.629156066554265,0.483168241652012,0,0,0.405450430580328,1.02710957164827,0.129920822977795,0.895133478337407,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.680191150845634,3.32978930061097,0,0.167884616364078,0.579568782096571,0.375364950902364,0.183151624267265,0.214368379079066,0,9.03602948187307,9.66682996665071,12.0308057822273,73.725015225442,9.59115527678899,10.5755145634558,8.77529250301348,10.3573876741571,15.406841905463,6.21312374102184,0.31136204275253,2.79317411380722,4.26834014385335,7.05009479498053,3.35381060204772,1.65459157605013,15.7795176739147,12.5681384915725,16.0459604795908,14.9091354940641,13.9413614939632,12.8265912142532,8.5213771797593,9.15559679389631,9.5342878466318,8.57328644309533,8.45955579397445,8.10218725947561,18.9559514369521,12.6591071315582,13.7147700954166,7.45398385869217,8.10683045820891,10.7556348307923,8.75217237862575,8.2922315733843,12.2561741824758,16.0472523977084,13.0371949292027,11.7839877048125,13.4057570480317,8.47138548429846,8.59385190656348,8.2116525828562,11.9602098808308,6.24526444844865,10.292990771598,14.396360621236,43.0398747154898,17.4267221104417,18.5494268496337
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.71920063963254,1.54701627683233,2.83243045203437,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0,4.85606673486466,4.8591079009355,1.46988959057945,0.958454710182364,0.919218786610021,4.40463523997555,4.85211884723713,5.68344173048101,3.82470234417562,1.82975287204819,2.6045668527838,3.90856198601933,5.6276261003168,7.33431589328689,9.1334861496837,4.27115042397309,5.59198337475902,2.95332153999418,2.64500460373749,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0.253359865475099,0,0.11418387971906,0,4.30482203287992,1.21439728736295,3.04465478312141,1.15307748628029,1.50722640552623,4.9387256996996,0.753999547978053,4.44950941921873,0,0,12.2942805960031,1.54589062922275,1.45462575940567,0,5.27005434620785,7.54008144528438,0,0,0,0,15.8778077769112,9.15001205637253,2.26177833803156,10.9509321721134,12.0186264945255,8.10373373782284,12.4925772562173,2.34230536855727,0.373220911830279,0.252722758433675,1.05220927943237,0.780722657776222,0.459804208866946,1.26043490863744,3.91832526372859,4.83059143974428,1.40925092313335,1.03071897015702,3.88055056108524,0.215567992932842,2.83659120251729,3.87092473160687,5.91828477554452,2.50242524303038,7.3132954969655,5.35033554660653,1.99034266818493,0,0,0,1.44988040774851,1.17263029990548,0.540186184383045,2.13070262026689,0.787056926989615,0.771335564436891,1.16266972375204,0.804820204198858,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0,11.3556572224629,1.3377599609307,0,0,1.70630600428187,2.09013004674395,2.57734922644187,1.81515172161008,1.77902435075896,0.570676878337677,0,0,2.26201687920243,0.596869416123452,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.02823661348756,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,1.50160595144485,1.96558995113203,2.24862112384854,3.24576194221605,6.27060615356284,2.80088436959562,1.43848068725405,0.648540907100142,2.19649130550465,0,2.60498663367952,0.936113019343682,0,0,0,0,0.757965647081939,2.28150967018836,1.52770577197669,1.17345124144251,1.50755631697634,2.61848004974615,5.46374214001837,0.630540576424764,1.55025282754142,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,7.86697890940181,10.7834751664827,0.163934945376675,2.27223834483936,0.94652465824877,0.390438744296638,1.72338718186239,0,1.11399337041197,0,0,1.16902343164525,0.790575555893047,9.3183181762324,0.141940085208269,1.95872164033981,1.95464351224291,0.494910368917606,0,0.242780636154981,3.32555912661226,4.71512699389745,2.06711325016541,4.91896236710284,1.80899805217755,3.27180356529755,3.20847640546249,0.632073515871632,2.10837217149998,0,17.0219802876894,1.62054984628179,2.06973894052407,1.28602221018955,7.44828981297549,1.60531935841864,2.63278432963394,1.2178597964584,0.704015124191131,2.33015277950202,0,0.49465875882444,5.8127193610526,3.31721087104857,0.835606408021955,1.96969079694074,0,5.56275906031529,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0.276399947608848,0.954670618015114,0.632671987162271,2.23651413839534,0.86404272657441,1.88179466413022,0.436725127492355,2.15782954215713,2.39695021603474,0.523511883968059,0.259229946583586,0,0,1.04661582230785,0.66183396182839,1.16670713006429,0.387479470433193,1.85851738039856,1.64300134104056,1.3020438484395,0.629156066554265,0.483168241652012,0,0,0.405450430580328,1.02710957164827,0.129920822977795,0.895133478337407,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.680191150845634,3.32978930061097,0,0.167884616364078,0.579568782096571,0.375364950902364,0.183151624267265,0.214368379079066,0,9.03602948187307,9.66682996665071,12.0308057822273,73.725015225442,9.59115527678899,10.5755145634558,8.77529250301348,10.3573876741571,15.406841905463,6.21312374102184,0.31136204275253,2.79317411380722,4.26834014385335,7.05009479498053,3.35381060204772,1.65459157605013,15.7795176739147,12.5681384915725,16.0459604795908,14.9091354940641,13.9413614939632,12.8265912142532,8.5213771797593,9.15559679389631,9.5342878466318,8.57328644309533,8.45955579397445,8.10218725947561,18.9559514369521,12.6591071315582,13.7147700954166,7.45398385869217,8.10683045820891,10.7556348307923,8.75217237862575,8.2922315733843,12.2561741824758,16.0472523977084,13.0371949292027,11.7839877048125,13.4057570480317,8.47138548429846,8.59385190656348,8.2116525828562,11.9602098808308,6.24526444844865,10.292990771598,14.396360621236,43.0398747154898,17.4267221104417,18.5494268496337
|short_description=p4@Meg3
|short_description=p4@Meg3
}}
}}

Latest revision as of 07:24, 26 September 2015

Short description:p4@Meg3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Meg3_5end
Coexpression cluster:MCL_coexpression_mm9:236
Association with transcript: 0bp_to_ENSMUST00000124106, ENSMUST00000129245, ENSMUST00000143836, NR_027651, NR_027652, uc007pap.2, uc007paq.2, uc007par.2_5end
EntrezGene:Meg3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Meg3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.88
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H33.32
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C643.04
whole body, neonate N06.CNhs10515.692-21D117.43
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.02e-1254
neural tube2.84e-1152
neural rod2.84e-1152
future spinal cord2.84e-1152
neural keel2.84e-1152
neurectoderm3.11e-1064
neural plate3.11e-1064
presumptive neural plate3.11e-1064
brain1.40e-0947
future brain1.40e-0947
ecto-epithelium3.25e-0973
regional part of brain4.22e-0946
nervous system7.09e-0975
central nervous system1.93e-0873
anterior neural tube1.93e-0840
ectoderm-derived structure2.33e-0895
ectoderm2.33e-0895
presumptive ectoderm2.33e-0895
pre-chordal neural plate3.16e-0849
regional part of forebrain7.40e-0839
forebrain7.40e-0839
future forebrain7.40e-0839
occipital lobe2.16e-0710
visual cortex2.16e-0710
neocortex2.16e-0710
gray matter2.59e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:110779189..110779216,%2B&oldid=4240761"