FFCP PHASE1:Mm9::chr12:114567912..114567927,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114567912..114567927,- | |||
|description=CAGE_peak_at_chr12:114567912..114567927,- | |description=CAGE_peak_at_chr12:114567912..114567927,- | ||
|id=chr12:114567912..114567927,- | |id=chr12:114567912..114567927,- | ||
|ontology_enrichment_celltype=CL:0002027!6.51e-17!3;CL:0002006!6.51e-17!3;CL:0002024!6.51e-17!3;CL:0000553!2.06e-14!6;CL:0000556!2.06e-14!6;CL:0000050!1.13e-09!9;CL:0000414!6.06e-08!11;CL:0000839!9.68e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.10e-37,3;CL:0002006,2.10e-37,3;CL:0002024,2.10e-37,3;CL:0000553,3.74e-19,6;CL:0000556,3.74e-19,6;CL:0000050,4.95e-13,9;CL:0000839,3.07e-09,13;CL:0000763,1.25e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!6.51e-17!3;UBERON:0001962!1.31e-11!2;UBERON:0001961!1.31e-11!2;UBERON:0001744!1.31e-11!2;UBERON:0002193!9.76e-10!48;UBERON:0007023!2.36e-07!51;UBERON:0000029!5.73e-07!1;UBERON:0001097!5.73e-07!1;UBERON:0003968!5.73e-07!1;UBERON:0008785!5.73e-07!1;UBERON:0001467!5.73e-07!1;UBERON:0001421!5.73e-07!1;UBERON:0001044!6.50e-07!1;UBERON:0001736!6.50e-07!1;UBERON:0003293!6.50e-07!1;UBERON:0003294!6.50e-07!1;UBERON:0010047!6.50e-07!1;UBERON:0001829!6.50e-07!1;UBERON:0000167!6.50e-07!1;UBERON:0006298!6.50e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.08e-17,3;UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0001044,4.85e-14,1;UBERON:0001736,4.85e-14,1;UBERON:0003293,4.85e-14,1;UBERON:0003294,4.85e-14,1;UBERON:0001829,4.85e-14,1;UBERON:0010047,4.85e-14,1;UBERON:0000167,4.85e-14,1;UBERON:0006298,4.85e-14,1;UBERON:0003199,1.55e-13,1;UBERON:0002193,1.48e-09,48;UBERON:0002405,1.48e-09,48;UBERON:0000165,1.14e-07,2;UBERON:0000166,1.14e-07,2;UBERON:0000930,1.14e-07,2;UBERON:0002371,1.25e-07,16;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99530499812892,5.06188168474565,1.39912375625629,0,0.137114433605739,0,0.17008658030214,0,0,0.47997726838022,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,179.44395336749,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,12.6444451790411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99530499812892,5.06188168474565,1.39912375625629,0,0.137114433605739,0,0.17008658030214,0,0,0.47997726838022,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,179.44395336749,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,12.6444451790411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:114567912..114567927,- | |short_description=p@chr12:114567912..114567927,- | ||
}} | }} |
Latest revision as of 19:42, 4 August 2015
Short description: | p@chr12:114567912..114567927, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114567912..114567927, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.10e-37 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.10e-37 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.10e-37 | 3 |
megakaryocyte progenitor cell | 3.74e-19 | 6 |
megakaryocyte | 3.74e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 4.95e-13 | 9 |
myeloid lineage restricted progenitor cell | 3.07e-09 | 13 |
myeloid cell | 1.25e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.08e-17 | 3 |
lymph node | 3.62e-14 | 1 |
axillary lymph node | 3.62e-14 | 1 |
peripheral lymph node | 3.62e-14 | 1 |
shoulder | 3.62e-14 | 1 |
saliva-secreting gland | 4.85e-14 | 1 |
submandibular gland | 4.85e-14 | 1 |
gland of oral region | 4.85e-14 | 1 |
gland of foregut | 4.85e-14 | 1 |
major salivary gland | 4.85e-14 | 1 |
oral gland | 4.85e-14 | 1 |
oral cavity | 4.85e-14 | 1 |
submandibular gland primordium | 4.85e-14 | 1 |
egg chamber | 1.55e-13 | 1 |
hemolymphoid system | 1.48e-09 | 48 |
immune system | 1.48e-09 | 48 |
mouth | 1.14e-07 | 2 |
oral opening | 1.14e-07 | 2 |
stomodeum | 1.14e-07 | 2 |
bone marrow | 1.25e-07 | 16 |
gut-associated lymphoid tissue | 2.03e-07 | 2 |
mucosa-associated lymphoid tissue | 2.03e-07 | 2 |
lymphoid tissue | 2.03e-07 | 2 |