FFCP PHASE1:Mm9::chr12:8928848..8928860,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:8928848..8928860,+ | |||
|description=CAGE_peak_at_chr12:8928848..8928860,+ | |description=CAGE_peak_at_chr12:8928848..8928860,+ | ||
|id=chr12:8928848..8928860,+ | |id=chr12:8928848..8928860,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-13!50;CL:0000221!1.27e-12!44;CL:0000133!1.27e-12!44;CL:0002319!4.64e-12!43;CL:0002321!1.27e-10!70;CL:0000220!1.27e-10!70;CL:0002371!1.55e-10!118;CL:0000144!2.52e-10!121;CL:0000012!2.52e-10!121;CL:0000548!1.28e-09!115;CL:0000004!1.28e-09!115;CL:0000255!1.28e-09!115;CL:0000333!7.97e-08!10;CL:0000095!7.97e-08!10;CL:0000243!7.97e-08!10;CL:0000123!7.97e-08!10;CL:0000125!7.97e-08!10;CL:0000030!7.97e-08!10;CL:0000339!7.97e-08!10;CL:0000393!1.40e-07!39;CL:0000211!1.40e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.27e-12,44;CL:0000133,1.27e-12,44;CL:0002319,4.64e-12,43;CL:0002321,1.27e-10,70;CL:0000333,7.97e-08,10;CL:0000095,7.97e-08,10;CL:0000243,7.97e-08,10;CL:0000123,7.97e-08,10;CL:0000125,7.97e-08,10;CL:0000030,7.97e-08,10;CL:0000339,7.97e-08,10;CL:0000393,1.40e-07,39;CL:0000211,1.40e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.20e-07!75;UBERON:0001016!8.20e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.20e-07,75 | |||
|phase1_expression=34.5921509746355,18.4956966048861,22.7499619694768,13.6108895088074,12.0214975187123,18.298840638396,17.9881733258555,17.3025253411712,24.074871487935,24.5767752638093,12.6701296486874,16.6723812300253,14.8944635040149,17.2218192765425,10.3264026162855,15.3881203216268,13.2916756844348,19.0854610041734,15.4939309974485,17.8243653755173,27.6390692990977,11.5177503393027,12.27639008953,20.4790301175561,27.2997044469932,30.4342940980961,26.7072437618626,24.1327780608196,26.9833255628051,27.4712841438325,35.2551511941934,8.25539875497521,7.99584223859941,0,19.3530585233354,27.7611857748682,20.8252743387616,23.8563029520037,39.8481025707138,25.1291397107423,19.9998705930545,20.4913645487534,22.8189865924642,24.423982687262,25.2428558736591,31.2029478674859,81.3686998121961,40.7707042431435,63.2696206275279,60.8565584102507,50.8150710500066,38.8131923785423,23.1539996359676,8.70434570413613,13.1076581665561,15.6928255981928,21.203474555468,30.9403255366465,20.4339625468194,15.340738398889,18.3811107016792,53.1985915348537,58.6934565433352,82.7907739898887,60.3208481165854,80.2842529889093,62.3168229878282,62.6275837674134,34.5286408987231,28.4862529879867,34.2829687002753,25.1372866275347,22.5285911770646,22.0483438586917,27.4118047112156,18.3843757322004,13.2139057199266,24.515968912356,22.2729473221553,24.7946220932764,26.1654660702892,29.1711487511786,23.7305549151174,30.9519435517424,23.5309301576288,16.4992007865254,17.6540884190888,20.6903384866084,44.2998230999127,48.7436562688767,31.5952292684829,35.2773789562368,16.319312008986,12.4131734076698,11.695975514058,8.51251085484938,20.2239964989723,33.4043432252993,39.4874726996361,34.9806178765237,41.4079654143441,17.9657068380045,2.54805239706646,14.2213340630666,35.9375128078615,33.443502242713,35.8922355960496,17.8126852361734,12.9468941823586,29.0946592567057,15.26670875542,17.0500667854799,20.5247792557892,26.2257394561563,21.1659672844269,29.5316489624737,20.517182321953,10.4111536982336,12.3845477272982,22.0002915928476,17.2256384399107,21.819386391085,1.86391761218122,11.7112318804619,17.1746299587033,12.0064815948038,18.6911594229236,24.5960119707297,19.8229554233981,17.2259235315546,9.60751265919116,15.5811396619952,12.3415267336516,16.1100738118108,18.7009240103604,15.7374025175725,23.7285717771237,20.5271501506653,33.8648496301124,15.3622554797126,23.5518001762494,22.9902104433473,19.9868964083938,23.811361218043,20.342913246247,15.8861013153214,21.5513966487376,12.9351685369508,22.6346392579484,19.0997140969497,20.0584281546902,21.9195732427575,18.6291656981151,17.4126083261083,18.7261744131229,17.7140497468459,9.83098462238529,15.6982223339976,13.6398479709884,28.3762308373638,21.8109235782419,29.3501160181454,17.7558551688908,17.7087808572663,24.2199367233184,22.0907247512887,18.7791380979733,24.0536605276369,19.7471819896177,21.1776028662033,19.6997207196429,25.2925978245825,18.8813099150304,18.788898626452,14.2997165023607,23.4622516224768,15.5296828002385,8.99131926656051,20.049095550312,16.4888037020911,14.1754207454303,13.1094291005173,12.2307924114679,16.5496294717926,14.2358718463353,17.1286912912971,17.0907941984183,15.3196483471686,16.5719474051252,5.39291645192533,12.9682829924817,15.5330193138406,29.2088567467746,19.7649926814831,20.2873924211545,22.1979947351393,21.9166310499417,24.4774011417212,24.7254860155846,20.0749801252259,22.2938193534752,21.3477093584715,12.4510103376603,9.51017102581736,10.4176267409998,9.89393294493356,8.11440485554012,7.47649195232492,10.1850340712568,8.0554918486227,15.7271169971784,10.158772287959,12.9391385874619,14.8856379067401,19.6583734062173,9.59799736199025,11.1226396383586,13.0259750768109,27.5282253348241,20.6545638829828,13.6890580211302,15.7862929770925,12.6732734075791,18.4256883185997,16.4250112211349,20.4890330250689,20.8078390220172,17.4957104822532,19.6129365448709,27.0374469280968,31.7740366633248,29.6530570092099,54.284862218138,52.2149456465961,12.2941068254759,13.2449638226272,17.3394637186815,20.6292568402278,22.4590875166045,36.6082844446341,29.9732808445444,32.7968545209176,22.1886099664783,22.941004603445,25.6218475194753,24.6276581786284,25.5030742055183,30.9791209385991,31.6230222357219,13.4954952897159,18.0263908214501,23.3265940804104,23.7814960656221,20.951205617512,17.2568679841952,12.3818124439041,17.8370898609203,19.0491130553457,19.489924930131,17.5238034328039,17.3146956422708,19.6308213917853,19.250858432775,13.5895805912401,16.8669773719998,16.5016869197099,52.0872596803296,26.10885863454,29.6231385862508,30.2215219394545,26.2463545790565,29.0741172691375,32.7452550998221,35.0134691481789,27.4565898434541,31.774810629573,18.5243854366168,7.25499512942512,17.2766936564619,15.2591700068234,16.4733834724328,12.8029901801148,11.659233465194,17.4299783889879,8.71441492069049,15.8917888331681,10.5560880600736,9.41842285023455,6.83471138605126,12.3540213531522,21.0773253192381,15.534611207926,17.1367967517486,13.3653886522116,17.8729836373341,16.4688768372747,19.7649773703896,18.6088583452877,13.9752040797554,15.3745354878696,17.3572257023205,17.53764811293,19.5718609670607,24.853572523477,34.3852692597356,19.8857006238492,28.4588603586208,19.4451188344048,20.7947315799147,20.4436911843842,21.945803626756,14.4526867176785,15.8337610082823,36.2376181239009,42.3404109199062,6.95224465381992,16.4207424385033,10.2710957164827,8.44485349355668,8.59328139203911,9.73538638428198,10.2166132091974,8.12292399460175,7.37055084621478,8.99240318528998,7.25948532985252,6.82205165178267,9.81360784731361,12.0383209247016,19.272082607293,18.8688060367955,15.3410694802203,16.7884616364078,26.4669743824101,23.8356743823001,16.4836461840539,22.2943114242228,19.0597399533438,6.7770221114048,12.889106622201,9.16632821503035,20.4505286988988,14.3867329151835,12.8416962556249,12.8254275044043,13.9599572999508,10.4222754066367,17.0860902878101,8.82192454465502,20.7492934168536,15.8782253351345,13.3708694387562,6.91723436672342,6.06683577885047,8.66762238426299,11.743998262617,10.2694147069381,14.4037410705365,15.2087579934144,11.8834595073228,17.4173203893981,17.3508163017196,16.7137214660835,16.1939855036245,15.2967310247209,18.1334667235883,14.835092428919,11.0399190100798,9.60033906679163,14.9079677173843,17.8827142460491,11.7730597472186,15.2457196272836,13.9614103021266,15.1830217484401,14.7319038405192,13.4446072707403,8.97827634652382,13.64302708428,14.3816544268323,15.9600106836179,18.43748410113,14.6609024345667,13.4897712086491,15.9073493742878,17.4045553779122,13.5814715768879,17.8679049486808,18.3175590140133 | |phase1_expression=34.5921509746355,18.4956966048861,22.7499619694768,13.6108895088074,12.0214975187123,18.298840638396,17.9881733258555,17.3025253411712,24.074871487935,24.5767752638093,12.6701296486874,16.6723812300253,14.8944635040149,17.2218192765425,10.3264026162855,15.3881203216268,13.2916756844348,19.0854610041734,15.4939309974485,17.8243653755173,27.6390692990977,11.5177503393027,12.27639008953,20.4790301175561,27.2997044469932,30.4342940980961,26.7072437618626,24.1327780608196,26.9833255628051,27.4712841438325,35.2551511941934,8.25539875497521,7.99584223859941,0,19.3530585233354,27.7611857748682,20.8252743387616,23.8563029520037,39.8481025707138,25.1291397107423,19.9998705930545,20.4913645487534,22.8189865924642,24.423982687262,25.2428558736591,31.2029478674859,81.3686998121961,40.7707042431435,63.2696206275279,60.8565584102507,50.8150710500066,38.8131923785423,23.1539996359676,8.70434570413613,13.1076581665561,15.6928255981928,21.203474555468,30.9403255366465,20.4339625468194,15.340738398889,18.3811107016792,53.1985915348537,58.6934565433352,82.7907739898887,60.3208481165854,80.2842529889093,62.3168229878282,62.6275837674134,34.5286408987231,28.4862529879867,34.2829687002753,25.1372866275347,22.5285911770646,22.0483438586917,27.4118047112156,18.3843757322004,13.2139057199266,24.515968912356,22.2729473221553,24.7946220932764,26.1654660702892,29.1711487511786,23.7305549151174,30.9519435517424,23.5309301576288,16.4992007865254,17.6540884190888,20.6903384866084,44.2998230999127,48.7436562688767,31.5952292684829,35.2773789562368,16.319312008986,12.4131734076698,11.695975514058,8.51251085484938,20.2239964989723,33.4043432252993,39.4874726996361,34.9806178765237,41.4079654143441,17.9657068380045,2.54805239706646,14.2213340630666,35.9375128078615,33.443502242713,35.8922355960496,17.8126852361734,12.9468941823586,29.0946592567057,15.26670875542,17.0500667854799,20.5247792557892,26.2257394561563,21.1659672844269,29.5316489624737,20.517182321953,10.4111536982336,12.3845477272982,22.0002915928476,17.2256384399107,21.819386391085,1.86391761218122,11.7112318804619,17.1746299587033,12.0064815948038,18.6911594229236,24.5960119707297,19.8229554233981,17.2259235315546,9.60751265919116,15.5811396619952,12.3415267336516,16.1100738118108,18.7009240103604,15.7374025175725,23.7285717771237,20.5271501506653,33.8648496301124,15.3622554797126,23.5518001762494,22.9902104433473,19.9868964083938,23.811361218043,20.342913246247,15.8861013153214,21.5513966487376,12.9351685369508,22.6346392579484,19.0997140969497,20.0584281546902,21.9195732427575,18.6291656981151,17.4126083261083,18.7261744131229,17.7140497468459,9.83098462238529,15.6982223339976,13.6398479709884,28.3762308373638,21.8109235782419,29.3501160181454,17.7558551688908,17.7087808572663,24.2199367233184,22.0907247512887,18.7791380979733,24.0536605276369,19.7471819896177,21.1776028662033,19.6997207196429,25.2925978245825,18.8813099150304,18.788898626452,14.2997165023607,23.4622516224768,15.5296828002385,8.99131926656051,20.049095550312,16.4888037020911,14.1754207454303,13.1094291005173,12.2307924114679,16.5496294717926,14.2358718463353,17.1286912912971,17.0907941984183,15.3196483471686,16.5719474051252,5.39291645192533,12.9682829924817,15.5330193138406,29.2088567467746,19.7649926814831,20.2873924211545,22.1979947351393,21.9166310499417,24.4774011417212,24.7254860155846,20.0749801252259,22.2938193534752,21.3477093584715,12.4510103376603,9.51017102581736,10.4176267409998,9.89393294493356,8.11440485554012,7.47649195232492,10.1850340712568,8.0554918486227,15.7271169971784,10.158772287959,12.9391385874619,14.8856379067401,19.6583734062173,9.59799736199025,11.1226396383586,13.0259750768109,27.5282253348241,20.6545638829828,13.6890580211302,15.7862929770925,12.6732734075791,18.4256883185997,16.4250112211349,20.4890330250689,20.8078390220172,17.4957104822532,19.6129365448709,27.0374469280968,31.7740366633248,29.6530570092099,54.284862218138,52.2149456465961,12.2941068254759,13.2449638226272,17.3394637186815,20.6292568402278,22.4590875166045,36.6082844446341,29.9732808445444,32.7968545209176,22.1886099664783,22.941004603445,25.6218475194753,24.6276581786284,25.5030742055183,30.9791209385991,31.6230222357219,13.4954952897159,18.0263908214501,23.3265940804104,23.7814960656221,20.951205617512,17.2568679841952,12.3818124439041,17.8370898609203,19.0491130553457,19.489924930131,17.5238034328039,17.3146956422708,19.6308213917853,19.250858432775,13.5895805912401,16.8669773719998,16.5016869197099,52.0872596803296,26.10885863454,29.6231385862508,30.2215219394545,26.2463545790565,29.0741172691375,32.7452550998221,35.0134691481789,27.4565898434541,31.774810629573,18.5243854366168,7.25499512942512,17.2766936564619,15.2591700068234,16.4733834724328,12.8029901801148,11.659233465194,17.4299783889879,8.71441492069049,15.8917888331681,10.5560880600736,9.41842285023455,6.83471138605126,12.3540213531522,21.0773253192381,15.534611207926,17.1367967517486,13.3653886522116,17.8729836373341,16.4688768372747,19.7649773703896,18.6088583452877,13.9752040797554,15.3745354878696,17.3572257023205,17.53764811293,19.5718609670607,24.853572523477,34.3852692597356,19.8857006238492,28.4588603586208,19.4451188344048,20.7947315799147,20.4436911843842,21.945803626756,14.4526867176785,15.8337610082823,36.2376181239009,42.3404109199062,6.95224465381992,16.4207424385033,10.2710957164827,8.44485349355668,8.59328139203911,9.73538638428198,10.2166132091974,8.12292399460175,7.37055084621478,8.99240318528998,7.25948532985252,6.82205165178267,9.81360784731361,12.0383209247016,19.272082607293,18.8688060367955,15.3410694802203,16.7884616364078,26.4669743824101,23.8356743823001,16.4836461840539,22.2943114242228,19.0597399533438,6.7770221114048,12.889106622201,9.16632821503035,20.4505286988988,14.3867329151835,12.8416962556249,12.8254275044043,13.9599572999508,10.4222754066367,17.0860902878101,8.82192454465502,20.7492934168536,15.8782253351345,13.3708694387562,6.91723436672342,6.06683577885047,8.66762238426299,11.743998262617,10.2694147069381,14.4037410705365,15.2087579934144,11.8834595073228,17.4173203893981,17.3508163017196,16.7137214660835,16.1939855036245,15.2967310247209,18.1334667235883,14.835092428919,11.0399190100798,9.60033906679163,14.9079677173843,17.8827142460491,11.7730597472186,15.2457196272836,13.9614103021266,15.1830217484401,14.7319038405192,13.4446072707403,8.97827634652382,13.64302708428,14.3816544268323,15.9600106836179,18.43748410113,14.6609024345667,13.4897712086491,15.9073493742878,17.4045553779122,13.5814715768879,17.8679049486808,18.3175590140133 | ||
|short_description=p@chr12:8928848..8928860,+ | |short_description=p@chr12:8928848..8928860,+ | ||
}} | }} |
Latest revision as of 11:10, 5 August 2015
Short description: | p@chr12:8928848..8928860, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8928848..8928860, + |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.27e-12 | 44 |
neurectodermal cell | 1.27e-12 | 44 |
neural cell | 4.64e-12 | 43 |
embryonic cell | 1.27e-10 | 70 |
migratory neural crest cell | 7.97e-08 | 10 |
neuron associated cell | 7.97e-08 | 10 |
glial cell (sensu Vertebrata) | 7.97e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 7.97e-08 | 10 |
glial cell | 7.97e-08 | 10 |
glioblast | 7.97e-08 | 10 |
glioblast (sensu Vertebrata) | 7.97e-08 | 10 |
electrically responsive cell | 1.40e-07 | 39 |
electrically active cell | 1.40e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.20e-07 | 75 |