FFCP PHASE1:Mm9::chr13:19824798..19824823,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319293 | |EntrezGene=319293 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=B9EKH0 | |UniProt=B9EKH0 | ||
|association_with_transcript=0bp_to_ENSMUST00000151029,NM_175688,uc007ppk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000151029,NM_175688,uc007ppk.1_5end | ||
|cluster_id=chr13:19824798..19824823,- | |||
|description=CAGE_peak_3_at_A530099J19Rik_5end | |description=CAGE_peak_3_at_A530099J19Rik_5end | ||
|id=chr13:19824798..19824823,- | |id=chr13:19824798..19824823,- | ||
|ontology_enrichment_celltype=CL:0000553!7.46e-08!6;CL:0000556!7.46e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.59e-14,6;CL:0000556,3.59e-14,6;CL:0000050,1.62e-09,9;CL:0002027,6.89e-08,3;CL:0002006,6.89e-08,3;CL:0002024,6.89e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.56e-09!126;UBERON:0004185!8.56e-09!126;UBERON:0000077!1.27e-08!97;UBERON:0004119!1.31e-08!130;UBERON:0000925!1.31e-08!130;UBERON:0006595!1.31e-08!130;UBERON:0001007!1.96e-08!128;UBERON:0001555!1.96e-08!128;UBERON:0007026!1.96e-08!128;UBERON:0001041!9.95e-08!92;UBERON:0002193!2.27e-07!48;UBERON:0002390!2.79e-07!45;UBERON:0003061!2.79e-07!45;UBERON:0003104!5.20e-07!131;UBERON:0009142!5.20e-07!131;UBERON:0000926!5.57e-07!193;UBERON:0004120!5.57e-07!193;UBERON:0006603!5.57e-07!193;UBERON:0002405!7.87e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.28e-14,6;UBERON:0004457,1.28e-14,6;UBERON:0000042,1.28e-14,6;UBERON:0004854,1.28e-14,6;UBERON:0009034,1.28e-14,6;UBERON:0002095,1.28e-14,6;UBERON:0004782,1.28e-14,6;UBERON:0003281,1.28e-14,6;UBERON:0009664,1.28e-14,6;UBERON:0002296,1.28e-14,6;UBERON:0005602,1.28e-14,6;UBERON:0001179,1.28e-14,6;UBERON:0006293,1.28e-14,6;UBERON:0002193,3.70e-14,48;UBERON:0002405,3.70e-14,48;UBERON:0002390,1.40e-12,45;UBERON:0003061,1.40e-12,45;UBERON:0003887,7.61e-09,10;UBERON:0004177,3.21e-08,29;UBERON:0005057,3.21e-08,29;UBERON:0000029,5.73e-07,1;UBERON:0001097,5.73e-07,1;UBERON:0003968,5.73e-07,1;UBERON:0001467,5.73e-07,1;UBERON:0002075,7.74e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,2.09868563438444,1.41957974411207,0.959801035240171,1.27316895539409,0.595303031057488,0,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,26.9295398993059,0.742210695324124,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,1.10732344824387,0.956728611944923,1.47476983244164,0.172684981865896,2.74833211304872,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.65954501176592,0.322928853391811,0.241251699712623,0,0.492422699235184,0,0,3.41741761595705,0,0.370389054739423,1.13021074202815,2.46049609897845,3.43167259809784,0,0,0.138199973804424,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.518459893167171,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0,0,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.706765149637033,0.381034033274999,0.201652370273681,1.26695244961678,0.865906574762965,1.16876902181569,0.906921534460845,0,0,0,0.579568782096571,0,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,2.09868563438444,1.41957974411207,0.959801035240171,1.27316895539409,0.595303031057488,0,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,26.9295398993059,0.742210695324124,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,1.10732344824387,0.956728611944923,1.47476983244164,0.172684981865896,2.74833211304872,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.65954501176592,0.322928853391811,0.241251699712623,0,0.492422699235184,0,0,3.41741761595705,0,0.370389054739423,1.13021074202815,2.46049609897845,3.43167259809784,0,0,0.138199973804424,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.518459893167171,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0,0,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.706765149637033,0.381034033274999,0.201652370273681,1.26695244961678,0.865906574762965,1.16876902181569,0.906921534460845,0,0,0,0.579568782096571,0,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p3@A530099J19Rik | |short_description=p3@A530099J19Rik | ||
}} | }} |
Latest revision as of 05:49, 27 September 2015
Short description: | p3@A530099J19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_A530099J19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | 0bp_to_ENSMUST00000151029, NM_175688, uc007ppk.1_5end |
EntrezGene: | A530099J19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.59e-14 | 6 |
megakaryocyte | 3.59e-14 | 6 |
megakaryocyte-erythroid progenitor cell | 1.62e-09 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 6.89e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.89e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.28e-14 | 6 |
cavity lining | 1.28e-14 | 6 |
serous membrane | 1.28e-14 | 6 |
gastrointestinal system mesentery | 1.28e-14 | 6 |
stomach region | 1.28e-14 | 6 |
mesentery | 1.28e-14 | 6 |
gastrointestinal system serosa | 1.28e-14 | 6 |
mesentery of stomach | 1.28e-14 | 6 |
gut mesentery | 1.28e-14 | 6 |
dorsal mesentery | 1.28e-14 | 6 |
dorsal mesogastrium | 1.28e-14 | 6 |
peritoneal cavity | 1.28e-14 | 6 |
spleen primordium | 1.28e-14 | 6 |
hemolymphoid system | 3.70e-14 | 48 |
immune system | 3.70e-14 | 48 |
hematopoietic system | 1.40e-12 | 45 |
blood island | 1.40e-12 | 45 |
intraembryonic coelom | 7.61e-09 | 10 |
hemopoietic organ | 3.21e-08 | 29 |
immune organ | 3.21e-08 | 29 |
lymph node | 5.73e-07 | 1 |
axillary lymph node | 5.73e-07 | 1 |
peripheral lymph node | 5.73e-07 | 1 |
shoulder | 5.73e-07 | 1 |
viscus | 7.74e-07 | 19 |