FFCP PHASE1:Hg19::chr10:102505954..102505973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5U4 | |UniProt=G3V5U4 | ||
|association_with_transcript=-3bp_to_ENST00000556085_5end | |association_with_transcript=-3bp_to_ENST00000556085_5end | ||
|cluster_id=chr10:102505954..102505973,+ | |||
|coexpression_cluster_id=C1556 | |||
|description=CAGE_peak_3_at_PAX2_5end | |description=CAGE_peak_3_at_PAX2_5end | ||
|id=chr10:102505954..102505973,+ | |id=chr10:102505954..102505973,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.27e-27!18;CL:0002518!1.27e-27!18;CL:1000449!4.43e-23!16;CL:1000507!3.61e-22!12;CL:1000494!3.61e-22!12;CL:0002681!4.11e-16!13;CL:0002584!4.11e-16!13;CL:0000239!2.75e-09!3;CL:1000615!2.75e-09!3;CL:0002306!2.75e-09!3 | |ontology_enrichment_celltype=CL:1000497!1.27e-27!18;CL:0002518!1.27e-27!18;CL:1000449!4.43e-23!16;CL:1000507!3.61e-22!12;CL:1000494!3.61e-22!12;CL:0002681!4.11e-16!13;CL:0002584!4.11e-16!13;CL:0000239!2.75e-09!3;CL:1000615!2.75e-09!3;CL:0002306!2.75e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.10e-75;10!CL:1000494;2.10e-75;10!CL:1000497;1.05e-62;17!CL:0002518;1.05e-62;17!CL:1000449;4.64e-60;15!CL:0002681;5.95e-40;12!CL:0002584;5.95e-40;12!CL:0000239;7.90e-24;3!CL:1000615;7.90e-24;3!CL:0002306;7.90e-24;3!CL:0000650;5.75e-17;2!CL:1000500;5.75e-17;2!CL:1000618;5.75e-17;2!CL:1001318;5.75e-17;2!CL:0002173;5.75e-17;2!CL:1000746;1.30e-10;7!CL:1000612;1.30e-10;7!CL:0000669;6.23e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.46e-75,10;CL:1000494,2.46e-75,10;CL:1000497,1.46e-62,17;CL:0002518,1.46e-62,17;CL:1000449,6.18e-60,15;CL:0002681,9.22e-40,12;CL:0002584,9.22e-40,12;CL:0000239,9.99e-24,3;CL:1000615,9.99e-24,3;CL:0002306,9.99e-24,3;CL:0000650,6.23e-17,2;CL:1000500,6.23e-17,2;CL:1000618,6.23e-17,2;CL:1001318,6.23e-17,2;CL:0002173,6.23e-17,2;CL:1000746,1.48e-10,7;CL:1000612,1.48e-10,7;CL:0000669,6.48e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.72e-17;2!UBERON:0003918;8.94e-13;10!UBERON:0007687;8.94e-13;10!UBERON:0005754;2.60e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!4.68e-40!32;UBERON:0002113!8.66e-37!27;UBERON:0003918!8.66e-37!27;UBERON:0005095!8.66e-37!27;UBERON:0007687!8.66e-37!27;UBERON:0000080!5.08e-28!18;UBERON:0002120!5.08e-28!18;UBERON:0004875!5.08e-28!18;UBERON:0005721!5.08e-28!18;UBERON:0005754!5.08e-28!18;UBERON:0007297!5.08e-28!18;UBERON:0006555!1.49e-25!17;UBERON:0005103!1.49e-25!17;UBERON:0000083!1.49e-25!17;UBERON:0009201!1.49e-25!17;UBERON:0004819!1.49e-25!17;UBERON:0006553!1.49e-25!17;UBERON:0003074!1.49e-25!17;UBERON:0003060!1.49e-25!17;UBERON:0004876!8.03e-25!20;UBERON:0006554!1.51e-24!44;UBERON:0001008!7.36e-24!45;UBERON:0003887!1.88e-23!21;UBERON:0004211!4.43e-23!16;UBERON:0001285!4.43e-23!16;UBERON:0007684!4.43e-23!16;UBERON:0003220!4.43e-23!16;UBERON:0004208!4.43e-23!16;UBERON:0009773!3.61e-22!12;UBERON:0001231!3.61e-22!12;UBERON:0004810!3.61e-22!12;UBERON:0000058!4.08e-21!26;UBERON:0003076!1.66e-18!15;UBERON:0003057!1.66e-18!15;UBERON:0003103!3.95e-18!69;UBERON:0003064!4.12e-17!37;UBERON:0005172!1.13e-16!55;UBERON:0005173!1.13e-16!55;UBERON:0001225!4.11e-16!13;UBERON:0008987!4.11e-16!13;UBERON:0004733!8.85e-16!12;UBERON:0002028!8.85e-16!12;UBERON:0007277!8.85e-16!12;UBERON:0001851!2.08e-15!16;UBERON:0002417!1.87e-14!61;UBERON:0000916!1.87e-14!61;UBERON:0004732!2.01e-14!13;UBERON:0002680!5.77e-13!9;UBERON:0001895!5.77e-13!9;UBERON:0010092!5.77e-13!9;UBERON:0003886!5.56e-12!63;UBERON:0000353!7.55e-12!17;UBERON:0002553!1.97e-11!70;UBERON:0006947!1.39e-09!3;UBERON:0004054!1.39e-09!3;UBERON:0006853!2.75e-09!3;UBERON:0007685!2.75e-09!3;UBERON:0004134!2.75e-09!3;UBERON:0005177!3.79e-09!107;UBERON:0007023!1.05e-08!115;UBERON:0003135!3.22e-08!11;UBERON:0000988!4.54e-08!3;UBERON:0002298!7.93e-08!8;UBERON:0005904!2.98e-07!4;UBERON:0000062!3.34e-07!511;UBERON:0002037!4.62e-07!6;UBERON:0006215!4.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.10e-75;10!UBERON:0009773;2.10e-75;10!UBERON:0001231;2.10e-75;10!UBERON:0004810;2.10e-75;10!UBERON:0002113;2.75e-60;24!UBERON:0011143;2.75e-60;24!UBERON:0006555;4.64e-60;15!UBERON:0004819;4.64e-60;15!UBERON:0001285;4.64e-60;15!UBERON:0007684;4.64e-60;15!UBERON:0000489;1.78e-49;29!UBERON:0006554;9.56e-48;30!UBERON:0001008;9.56e-48;30!UBERON:0001225;5.95e-40;12!UBERON:0008987;5.95e-40;12!UBERON:0001851;9.01e-32;15!UBERON:0000353;9.01e-32;15!UBERON:0006947;1.71e-24;3!UBERON:0004054;1.71e-24;3!UBERON:0006853;7.90e-24;3!UBERON:0007685;7.90e-24;3!UBERON:0004134;7.90e-24;3!UBERON:0005904;1.58e-18;4!UBERON:0005172;2.78e-18;52!UBERON:0005173;2.78e-18;52!UBERON:0003567;5.75e-17;2!UBERON:0003838;5.75e-17;2!UBERON:0003586;5.75e-17;2!UBERON:0005169;5.75e-17;2!UBERON:0002321;5.75e-17;2!UBERON:0005215;5.75e-17;2!UBERON:0002303;5.75e-17;2!UBERON:0002319;5.75e-17;2!UBERON:0002417;3.58e-13;58!UBERON:0000916;3.58e-13;58!UBERON:0003103;9.03e-13;61!UBERON:0003135;1.06e-11;11!UBERON:0000074;1.30e-10;7!UBERON:0001229;1.30e-10;7!UBERON:0001301;1.81e-09;1!UBERON:0000998;2.60e-09;1!UBERON:0006868;2.60e-09;1!UBERON:0001000;3.31e-09;1!UBERON:0005352;3.31e-09;1!UBERON:0003891;6.23e-09;4!UBERON:0005177;3.32e-08;99!UBERON:0000058;1.03e-07;10!UBERON:0003914;4.30e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.46e-75,10;UBERON:0002113,5.03e-73,26;UBERON:0003918,5.03e-73,26;UBERON:0011143,5.03e-73,26;UBERON:0005095,5.03e-73,26;UBERON:0007687,5.03e-73,26;UBERON:0006555,4.01e-67,16;UBERON:0004819,4.01e-67,16;UBERON:0000489,8.44e-61,31;UBERON:0004211,6.18e-60,15;UBERON:0009773,6.18e-60,15;UBERON:0001231,6.18e-60,15;UBERON:0001285,6.18e-60,15;UBERON:0007684,6.18e-60,15;UBERON:0004208,6.18e-60,15;UBERON:0001225,9.22e-40,12;UBERON:0008987,9.22e-40,12;UBERON:0006554,3.85e-39,47;UBERON:0001008,2.89e-38,48;UBERON:0005172,1.07e-33,54;UBERON:0005173,1.07e-33,54;UBERON:0001851,1.28e-31,15;UBERON:0000353,1.28e-31,15;UBERON:0002417,4.89e-30,60;UBERON:0000916,4.89e-30,60;UBERON:0003103,1.08e-29,68;UBERON:0006947,1.40e-24,3;UBERON:0004054,1.40e-24,3;UBERON:0006853,9.99e-24,3;UBERON:0007685,9.99e-24,3;UBERON:0004134,9.99e-24,3;UBERON:0000080,9.94e-22,9;UBERON:0002120,9.94e-22,9;UBERON:0004875,9.94e-22,9;UBERON:0005721,9.94e-22,9;UBERON:0005754,9.94e-22,9;UBERON:0007297,9.94e-22,9;UBERON:0005904,1.36e-18,4;UBERON:0004876,9.26e-18,11;UBERON:0003567,6.23e-17,2;UBERON:0003838,6.23e-17,2;UBERON:0003586,6.23e-17,2;UBERON:0005169,6.23e-17,2;UBERON:0002321,6.23e-17,2;UBERON:0005215,6.23e-17,2;UBERON:0002303,6.23e-17,2;UBERON:0002319,6.23e-17,2;UBERON:0005177,1.18e-16,101;UBERON:0003887,2.86e-16,12;UBERON:0005103,6.41e-16,8;UBERON:0000083,6.41e-16,8;UBERON:0009201,6.41e-16,8;UBERON:0006553,6.41e-16,8;UBERON:0003074,6.41e-16,8;UBERON:0003060,6.41e-16,8;UBERON:0009569,9.98e-15,112;UBERON:0000058,1.91e-14,19;UBERON:0003135,9.50e-12,11;UBERON:0003104,8.07e-11,160;UBERON:0009142,8.07e-11,160;UBERON:0010532,1.48e-10,7;UBERON:0000074,1.48e-10,7;UBERON:0001229,1.48e-10,7;UBERON:0001230,1.48e-10,7;UBERON:0003220,1.48e-10,7;UBERON:0005749,1.48e-10,7;UBERON:0004199,1.48e-10,7;UBERON:0004209,1.48e-10,7;UBERON:0004198,1.48e-10,7;UBERON:0001301,1.74e-09,1;UBERON:0000998,2.40e-09,1;UBERON:0006868,2.40e-09,1;UBERON:0001000,3.05e-09,1;UBERON:0005352,3.05e-09,1;UBERON:0003891,6.48e-09,4;UBERON:0003914,8.73e-09,117;UBERON:0002100,4.42e-08,199;UBERON:0003064,7.34e-07,28 | |||
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| ||
|short_description=p3@PAX2 | |short_description=p3@PAX2 | ||
}} | }} |
Latest revision as of 22:13, 15 September 2015
Short description: | p3@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -3bp_to_ENST00000556085_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | G3V5U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.46e-75 | 10 |
nephron tubule epithelial cell | 2.46e-75 | 10 |
kidney cell | 1.46e-62 | 17 |
kidney epithelial cell | 1.46e-62 | 17 |
epithelial cell of nephron | 6.18e-60 | 15 |
kidney cortical cell | 9.22e-40 | 12 |
renal cortical epithelial cell | 9.22e-40 | 12 |
brush border epithelial cell | 9.99e-24 | 3 |
kidney cortex tubule cell | 9.99e-24 | 3 |
epithelial cell of proximal tubule | 9.99e-24 | 3 |
mesangial cell | 6.23e-17 | 2 |
kidney interstitial cell | 6.23e-17 | 2 |
juxtaglomerular complex cell | 6.23e-17 | 2 |
renal interstitial pericyte | 6.23e-17 | 2 |
extraglomerular mesangial cell | 6.23e-17 | 2 |
glomerular cell | 1.48e-10 | 7 |
kidney corpuscule cell | 1.48e-10 | 7 |
pericyte cell | 6.48e-09 | 4 |