FFCP PHASE1:Hg19::chr10:112524543..112524547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:112524543..112524547,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr10:112524543..112524547,+ | |description=CAGE_peak_at_chr10:112524543..112524547,+ | ||
|id=chr10:112524543..112524547,+ | |id=chr10:112524543..112524547,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0005062;6.60e-50;4!UBERON:0007284;6.60e-50;4!UBERON:0004872;1.89e-08;7!UBERON:0003104;3.69e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.17e-31!2;DOID:178!1.41e-16!1;DOID:326!1.41e-16!1;DOID:3978!1.41e-16!1;DOID:3394!1.41e-16!1;DOID:5844!1.41e-16!1;DOID:1287!2.26e-16!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.14e-26;2!DOID:1287;1.13e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.40e-27!27;UBERON:0003978!1.05e-21!3;UBERON:0009751!1.05e-21!3;UBERON:0000946!1.05e-21!3;UBERON:0002523!1.05e-21!3;UBERON:0005983!1.05e-21!3;UBERON:0002165!1.05e-21!3;UBERON:0002062!1.05e-21!3;UBERON:0007280!1.05e-21!3;UBERON:0002146!5.53e-17!1;UBERON:0005623!5.53e-17!1;UBERON:0002135!7.57e-17!1;UBERON:0002079!1.04e-16!1;UBERON:0002022!3.07e-16!1;UBERON:0000948!1.13e-10!24;UBERON:0005498!1.13e-10!24;UBERON:0004140!1.13e-10!24;UBERON:0009881!1.13e-10!24;UBERON:0004141!1.13e-10!24;UBERON:0003084!1.13e-10!24;UBERON:0007005!1.13e-10!24;UBERON:0004139!1.13e-10!24;UBERON:0004291!1.13e-10!24;UBERON:0003103!1.51e-10!69;UBERON:0002133!4.34e-09!2;UBERON:0002081!5.08e-09!2;UBERON:0007023!7.13e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.68e-66;3!UBERON:0000946;4.68e-66;3!UBERON:0002135;3.99e-50;1!UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0007100;2.66e-32;25!UBERON:0002133;7.14e-26;2!UBERON:0000948;4.27e-21;22!UBERON:0010313;9.44e-21;10!UBERON:0003103;4.32e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.68e-66,3;UBERON:0009751,4.68e-66,3;UBERON:0000946,4.68e-66,3;UBERON:0002523,4.68e-66,3;UBERON:0005983,4.68e-66,3;UBERON:0002165,4.68e-66,3;UBERON:0002062,4.68e-66,3;UBERON:0007280,4.68e-66,3;UBERON:0002146,2.42e-50,1;UBERON:0005623,2.42e-50,1;UBERON:0002135,6.58e-50,1;UBERON:0007100,5.44e-30,27;UBERON:0004797,4.21e-29,7;UBERON:0002133,9.18e-26,2;UBERON:0010313,9.44e-21,10;UBERON:0002342,9.44e-21,10;UBERON:0005062,9.44e-21,10;UBERON:0000948,2.00e-19,24;UBERON:0005498,2.00e-19,24;UBERON:0004140,2.00e-19,24;UBERON:0009881,2.00e-19,24;UBERON:0004141,2.00e-19,24;UBERON:0003084,2.00e-19,24;UBERON:0007005,2.00e-19,24;UBERON:0004139,2.00e-19,24;UBERON:0004291,2.00e-19,24;UBERON:0003103,1.71e-12,68;UBERON:0001009,6.64e-08,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.3749625440701,0,0.199679000498991,1.28767814440971,0.89268582976749,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.3749625440701,0,0.199679000498991,1.28767814440971,0.89268582976749,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:112524543..112524547,+ | |short_description=p@chr10:112524543..112524547,+ | ||
}} | }} |
Latest revision as of 10:25, 23 July 2015
Short description: | p@chr10:112524543..112524547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112524543..112524547, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 4.68e-66 | 3 |
cardiac mesenchyme | 4.68e-66 | 3 |
cardial valve | 4.68e-66 | 3 |
tunica intima | 4.68e-66 | 3 |
heart layer | 4.68e-66 | 3 |
endocardium | 4.68e-66 | 3 |
endocardial cushion | 4.68e-66 | 3 |
presumptive endocardium | 4.68e-66 | 3 |
pulmonary valve | 2.42e-50 | 1 |
semi-lunar valve | 2.42e-50 | 1 |
mitral valve | 6.58e-50 | 1 |
primary circulatory organ | 5.44e-30 | 27 |
blood vessel layer | 4.21e-29 | 7 |
atrioventricular valve | 9.18e-26 | 2 |
neural crest-derived structure | 9.44e-21 | 10 |
neural crest | 9.44e-21 | 10 |
neural fold | 9.44e-21 | 10 |
heart | 2.00e-19 | 24 |
primitive heart tube | 2.00e-19 | 24 |
primary heart field | 2.00e-19 | 24 |
anterior lateral plate mesoderm | 2.00e-19 | 24 |
heart tube | 2.00e-19 | 24 |
heart primordium | 2.00e-19 | 24 |
cardiac mesoderm | 2.00e-19 | 24 |
cardiogenic plate | 2.00e-19 | 24 |
heart rudiment | 2.00e-19 | 24 |
compound organ | 1.71e-12 | 68 |
circulatory system | 6.64e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |