FFCP PHASE1:Hg19::chr10:22897333..22897359,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22897333..22897359,- | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_at_chr10:22897333..22897359,- | |description=CAGE_peak_at_chr10:22897333..22897359,- | ||
|id=chr10:22897333..22897359,- | |id=chr10:22897333..22897359,- | ||
|ontology_enrichment_celltype=CL:0000945!8.77e-49!24;CL:0000826!8.77e-49!24;CL:0000838!2.58e-23!52;CL:0000542!8.44e-23!53;CL:0000051!8.44e-23!53;CL:0002087!7.46e-22!119;CL:0002031!5.45e-19!124;CL:0000738!1.03e-17!140;CL:0000236!1.41e-16!14;CL:0000037!2.39e-13!172;CL:0000566!2.39e-13!172;CL:0002032!6.83e-13!165;CL:0000837!6.83e-13!165;CL:0000988!2.67e-12!182;CL:0000785!1.32e-10!2;CL:0000955!1.32e-10!2;CL:0000818!1.32e-10!2;CL:0000954!1.32e-10!2;CL:0000816!1.32e-10!2;CL:0000817!2.41e-07!3 | |ontology_enrichment_celltype=CL:0000945!8.77e-49!24;CL:0000826!8.77e-49!24;CL:0000838!2.58e-23!52;CL:0000542!8.44e-23!53;CL:0000051!8.44e-23!53;CL:0002087!7.46e-22!119;CL:0002031!5.45e-19!124;CL:0000738!1.03e-17!140;CL:0000236!1.41e-16!14;CL:0000037!2.39e-13!172;CL:0000566!2.39e-13!172;CL:0002032!6.83e-13!165;CL:0000837!6.83e-13!165;CL:0000988!2.67e-12!182;CL:0000785!1.32e-10!2;CL:0000955!1.32e-10!2;CL:0000818!1.32e-10!2;CL:0000954!1.32e-10!2;CL:0000816!1.32e-10!2;CL:0000817!2.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.34e-18;13!CL:0000945;5.79e-17;24!CL:0002087;2.29e-08;104!CL:0000860;6.52e-07;33!CL:0002057;6.52e-07;33!CL:0000542;7.29e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.68e-17,24;CL:0000826,5.68e-17,24;CL:0000236,1.48e-16,14;CL:0002087,1.81e-10,115;CL:0002031,4.92e-10,120;CL:0000738,7.43e-09,136;CL:0000838,4.54e-08,52;CL:0000542,6.35e-08,53;CL:0000051,6.35e-08,53;CL:0002032,1.79e-07,161;CL:0000837,1.79e-07,161;CL:0000037,3.70e-07,168;CL:0000988,8.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.29e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.22e-17!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.89e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.89e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.38e-15!3;UBERON:0004854!2.38e-15!3;UBERON:0009034!2.38e-15!3;UBERON:0002095!2.38e-15!3;UBERON:0004782!2.38e-15!3;UBERON:0003281!2.38e-15!3;UBERON:0009664!2.38e-15!3;UBERON:0002296!2.38e-15!3;UBERON:0005602!2.38e-15!3;UBERON:0001179!2.38e-15!3;UBERON:0006293!2.38e-15!3;UBERON:0004177!3.85e-11!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.10e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.10e-09,3;UBERON:0004854,1.10e-09,3;UBERON:0009034,1.10e-09,3;UBERON:0002095,1.10e-09,3;UBERON:0004782,1.10e-09,3;UBERON:0003281,1.10e-09,3;UBERON:0009664,1.10e-09,3;UBERON:0002296,1.10e-09,3;UBERON:0005602,1.10e-09,3;UBERON:0001179,1.10e-09,3;UBERON:0006293,1.10e-09,3 | |||
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|short_description=p@chr10:22897333..22897359,- | |short_description=p@chr10:22897333..22897359,- | ||
}} | }} |
Latest revision as of 12:37, 23 July 2015
Short description: | p@chr10:22897333..22897359, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22897333..22897359, - |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.68e-17 | 24 |
pro-B cell | 5.68e-17 | 24 |
B cell | 1.48e-16 | 14 |
nongranular leukocyte | 1.81e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.92e-10 | 120 |
leukocyte | 7.43e-09 | 136 |
lymphoid lineage restricted progenitor cell | 4.54e-08 | 52 |
lymphocyte | 6.35e-08 | 53 |
common lymphoid progenitor | 6.35e-08 | 53 |
hematopoietic oligopotent progenitor cell | 1.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-07 | 161 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 8.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.10e-09 | 3 |
gastrointestinal system mesentery | 1.10e-09 | 3 |
stomach region | 1.10e-09 | 3 |
mesentery | 1.10e-09 | 3 |
gastrointestinal system serosa | 1.10e-09 | 3 |
mesentery of stomach | 1.10e-09 | 3 |
gut mesentery | 1.10e-09 | 3 |
dorsal mesentery | 1.10e-09 | 3 |
dorsal mesogastrium | 1.10e-09 | 3 |
peritoneal cavity | 1.10e-09 | 3 |
spleen primordium | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.89e-11 | 10 |