FFCP PHASE1:Hg19::chr10:30046722..30046725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30046722..30046725,- | |||
|description=CAGE_peak_at_chr10:30046722..30046725,- | |description=CAGE_peak_at_chr10:30046722..30046725,- | ||
|id=chr10:30046722..30046725,- | |id=chr10:30046722..30046725,- | ||
|ontology_enrichment_celltype=CL:0000066!1.28e-16!254;CL:0002076!2.38e-14!43;CL:0002251!4.14e-12!21;CL:0000223!1.06e-09!59;CL:0000076!3.24e-09!62;CL:0002621!8.03e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.28e-16!254;CL:0002076!2.38e-14!43;CL:0002251!4.14e-12!21;CL:0000223!1.06e-09!59;CL:0000076!3.24e-09!62;CL:0002621!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.81e-40;1!CL:1000600;1.81e-40;1!CL:0000307;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.91e-41,1;CL:1000600,9.91e-41,1;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:1749!2.50e-36!14;DOID:305!6.56e-15!106;DOID:0050687!9.94e-10!143;DOID:4468!2.72e-09!2;DOID:299!1.22e-07!25;DOID:162!3.14e-07!235;DOID:14566!5.85e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4929;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.72e-22!12;UBERON:0003729!3.98e-22!5;UBERON:0003343!4.40e-18!4;UBERON:0004785!4.40e-18!4;UBERON:0001004!1.64e-07!72;UBERON:0000974!2.87e-07!10;UBERON:0000166!5.08e-07!21;UBERON:0000161!6.63e-07!35;UBERON:0000165!8.00e-07!28;UBERON:0000930!8.00e-07!28;UBERON:0001949!8.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.62e-41;1!UBERON:0003703;6.62e-41;1!UBERON:0001174;6.62e-41;1!UBERON:0004914;6.62e-41;1!UBERON:0004645;1.81e-40;1!UBERON:0001256;1.81e-40;1!UBERON:0001259;1.81e-40;1!UBERON:0002394;2.01e-40;4!UBERON:0003928;2.01e-40;4!UBERON:0002294;1.21e-23;7!UBERON:0001173;1.21e-23;7!UBERON:0001255;5.15e-21;2!UBERON:0001556;5.15e-21;2!UBERON:0000058;6.65e-17;10!UBERON:0002114;1.22e-14;2!UBERON:0002108;2.53e-09;4!UBERON:0000365;3.10e-09;5!UBERON:0005910;6.55e-08;6!UBERON:0002423;2.24e-07;25!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.62e-41,1;UBERON:0003703,6.62e-41,1;UBERON:0001174,6.62e-41,1;UBERON:0004914,6.62e-41,1;UBERON:0004645,9.91e-41,1;UBERON:0001256,9.91e-41,1;UBERON:0001259,9.91e-41,1;UBERON:0002394,2.38e-27,6;UBERON:0003928,2.38e-27,6;UBERON:0001255,3.81e-21,2;UBERON:0001556,3.81e-21,2;UBERON:0002294,1.24e-18,9;UBERON:0001173,1.24e-18,9;UBERON:0004912,1.24e-18,9;UBERON:0002114,1.22e-14,2;UBERON:0000058,2.17e-09,19;UBERON:0002108,2.53e-09,4;UBERON:0000365,2.74e-09,5;UBERON:0008835,3.04e-08,22;UBERON:0003894,3.04e-08,22;UBERON:0005910,5.92e-08,6;UBERON:0009854,6.29e-08,23;UBERON:0007499,2.28e-07,25;UBERON:0009497,2.28e-07,25;UBERON:0000015,2.28e-07,25;UBERON:0002423,2.28e-07,25;UBERON:0006235,2.28e-07,25;UBERON:0004161,2.28e-07,25;UBERON:0009856,4.02e-07,26;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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| ||
|short_description=p@chr10:30046722..30046725,- | |short_description=p@chr10:30046722..30046725,- | ||
}} | }} |
Latest revision as of 13:04, 23 July 2015
Short description: | p@chr10:30046722..30046725, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30046722..30046725, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.91e-41 | 1 |
lower urinary tract cell | 9.91e-41 | 1 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.62e-41 | 1 |
extrahepatic bile duct | 6.62e-41 | 1 |
common bile duct | 6.62e-41 | 1 |
duodenal papilla | 6.62e-41 | 1 |
urinary bladder urothelium | 9.91e-41 | 1 |
wall of urinary bladder | 9.91e-41 | 1 |
mucosa of urinary bladder | 9.91e-41 | 1 |
bile duct | 2.38e-27 | 6 |
digestive system duct | 2.38e-27 | 6 |
urinary bladder | 3.81e-21 | 2 |
lower urinary tract | 3.81e-21 | 2 |
biliary system | 1.24e-18 | 9 |
biliary tree | 1.24e-18 | 9 |
biliary bud | 1.24e-18 | 9 |
duodenum | 1.22e-14 | 2 |
duct | 2.17e-09 | 19 |
small intestine | 2.53e-09 | 4 |
urothelium | 2.74e-09 | 5 |
hepatic diverticulum | 3.04e-08 | 22 |
liver primordium | 3.04e-08 | 22 |
transitional epithelium | 5.92e-08 | 6 |
digestive tract diverticulum | 6.29e-08 | 23 |
epithelial sac | 2.28e-07 | 25 |
epithelium of foregut-midgut junction | 2.28e-07 | 25 |
anatomical boundary | 2.28e-07 | 25 |
hepatobiliary system | 2.28e-07 | 25 |
foregut-midgut junction | 2.28e-07 | 25 |
septum transversum | 2.28e-07 | 25 |
sac | 4.02e-07 | 26 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.11e-21 | 2 |