FFCP PHASE1:Hg19::chr10:52385542..52385547,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:52385542..52385547,- | |||
|description=CAGE_peak_at_chr10:52385542..52385547,- | |description=CAGE_peak_at_chr10:52385542..52385547,- | ||
|id=chr10:52385542..52385547,- | |id=chr10:52385542..52385547,- | ||
|ontology_enrichment_celltype=CL:0000066!2.92e-09!254 | |ontology_enrichment_celltype=CL:0000066!2.92e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.47e-53;3!CL:0002202;1.08e-18;9!CL:0002632;1.08e-18;9!CL:0002368;2.76e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.68e-53,3;CL:0000069,1.68e-53,3;CL:0000307,1.68e-53,3;CL:0000377,1.68e-53,3;CL:0002202,1.13e-18,9;CL:0002632,1.13e-18,9;CL:0002368,2.85e-13,13;CL:0002076,2.66e-09,42;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.47e-53;3!UBERON:0008814;6.30e-21;2!UBERON:0010056;6.30e-21;2!CL:0000223;6.64e-07;58 | |||
|ontology_enrichment_disease=DOID:162!1.73e-24!235;DOID:14566!1.47e-23!239;DOID:0050687!4.23e-19!143;DOID:305!2.89e-15!106;DOID:0050686!9.18e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.21e-40;1!DOID:74;4.21e-21;2!DOID:1287;2.94e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.91e-41,1;DOID:74,3.81e-21,2;DOID:1287,2.80e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.71e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;1.08e-23;7!UBERON:0001005;1.08e-23;7!UBERON:0001723;1.96e-14;3!UBERON:0001033;1.96e-14;3!UBERON:0007196;1.18e-11;15!UBERON:0001558;1.18e-11;15!UBERON:0003343;3.60e-11;4!UBERON:0004785;3.60e-11;4!UBERON:0000974;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.14e-23,7;UBERON:0001005,1.14e-23,7;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0007196,1.21e-11,15;UBERON:0001558,1.21e-11,15;UBERON:0003343,3.79e-11,4;UBERON:0004785,3.79e-11,4;UBERON:0000072,2.16e-08,47;UBERON:0000065,2.12e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,2.01090682660736,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,0,0,0,0,0,0,0,0,0.494411622680279,0.422250816255987,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,1.13852239634511,0,0,0,0.848118428603645,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.685209623233754,0.19871461170299,0,0,0,0,0,0.432271251462318,0,0.343189995723929,0.288109595976299,0.124252535565433,0.235694034616795,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,2.45552662990775,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0.105600336519406,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0.909894705249887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,1.03973099535304,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.883164973845552,0.655593431782173,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,2.01090682660736,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,0,0,0,0,0,0,0,0,0.494411622680279,0.422250816255987,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,1.13852239634511,0,0,0,0.848118428603645,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.685209623233754,0.19871461170299,0,0,0,0,0,0.432271251462318,0,0.343189995723929,0.288109595976299,0.124252535565433,0.235694034616795,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,2.45552662990775,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0.105600336519406,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0.909894705249887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,1.03973099535304,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.883164973845552,0.655593431782173,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr10:52385542..52385547,- | |short_description=p@chr10:52385542..52385547,- | ||
}} | }} |
Latest revision as of 14:07, 23 July 2015
Short description: | p@chr10:52385542..52385547, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52385542..52385547, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.68e-53 | 3 |
branched duct epithelial cell | 1.68e-53 | 3 |
tracheal epithelial cell | 1.68e-53 | 3 |
tracheoblast | 1.68e-53 | 3 |
epithelial cell of tracheobronchial tree | 1.13e-18 | 9 |
epithelial cell of lower respiratory tract | 1.13e-18 | 9 |
respiratory epithelial cell | 2.85e-13 | 13 |
endo-epithelial cell | 2.66e-09 | 42 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.14e-23 | 7 |
respiratory airway | 1.14e-23 | 7 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
tracheobronchial tree | 1.21e-11 | 15 |
lower respiratory tract | 1.21e-11 | 15 |
mucosa of oral region | 3.79e-11 | 4 |
respiratory system mucosa | 3.79e-11 | 4 |
segment of respiratory tract | 2.16e-08 | 47 |
respiratory tract | 2.12e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.91e-41 | 1 |
hematopoietic system disease | 3.81e-21 | 2 |
cardiovascular system disease | 2.80e-11 | 4 |