FFCP PHASE1:Mm9::chr15:6374201..6374212,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=825 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:6374201..6374212,+ | |||
|description=CAGE_peak_at_chr15:6374201..6374212,+ | |description=CAGE_peak_at_chr15:6374201..6374212,+ | ||
|id=chr15:6374201..6374212,+ | |id=chr15:6374201..6374212,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.18e-18,4;CL:0000766,3.18e-18,4;CL:0000234,3.18e-18,4;CL:0000576,3.18e-18,4;CL:0000235,3.18e-18,4;CL:0000864,3.18e-18,4;CL:0002009,3.18e-18,4;CL:0000040,3.18e-18,4;CL:0000559,3.18e-18,4;CL:0002092,1.17e-14,3;CL:0002540,1.17e-14,3;CL:0000473,1.69e-10,7;CL:0000557,1.69e-10,7;CL:0000878,5.16e-10,2;CL:0000129,5.16e-10,2;CL:0002476,7.03e-10,2;CL:0002453,4.06e-09,8;CL:0000333,2.56e-07,10;CL:0000095,2.56e-07,10;CL:0000243,2.56e-07,10;CL:0000123,2.56e-07,10;CL:0000125,2.56e-07,10;CL:0000030,2.56e-07,10;CL:0000339,2.56e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-13,16;UBERON:0001911,3.07e-10,2;UBERON:0000076,3.07e-10,2;UBERON:0005333,3.07e-10,2;UBERON:0008425,3.07e-10,2;UBERON:0005311,3.07e-10,2;UBERON:0001474,1.88e-09,22;UBERON:0004765,1.88e-09,22;UBERON:0001434,1.88e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,1.56478268869608,0.218025156380447,0,0.194429899074283,1.1198913730029,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0,0.889294796111139,1.3498495759221,6.92206453796882,5.6838409195688,2.39680088414724,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0.448026887097336,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,1.03909497345377,0,0.608930956624282,0.691846491768175,0.904335843315735,0.823120949949934,0.502666365318702,10.8765785803125,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.823494773620054,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0.379335801906163,0.571242563048644,0,0.610953983535943,0.581857461502877,0.350679099451593,1.70738650235495,1.03327103585722,1.72698600625512,1.1105744752962,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,4.31304619582064,1.11642284300551,0.312037673114561,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,4.52373851817817,1.08781136763742,2.45882136509518,2.20749397043786,0,0,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0.483168241652012,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,1.56478268869608,0.218025156380447,0,0.194429899074283,1.1198913730029,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0,0.889294796111139,1.3498495759221,6.92206453796882,5.6838409195688,2.39680088414724,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0.448026887097336,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,1.03909497345377,0,0.608930956624282,0.691846491768175,0.904335843315735,0.823120949949934,0.502666365318702,10.8765785803125,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.823494773620054,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0.379335801906163,0.571242563048644,0,0.610953983535943,0.581857461502877,0.350679099451593,1.70738650235495,1.03327103585722,1.72698600625512,1.1105744752962,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,4.31304619582064,1.11642284300551,0.312037673114561,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,4.52373851817817,1.08781136763742,2.45882136509518,2.20749397043786,0,0,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0.483168241652012,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p@chr15:6374201..6374212,+ | |short_description=p@chr15:6374201..6374212,+ | ||
}} | }} |
Latest revision as of 08:53, 5 August 2015
Short description: | p@chr15:6374201..6374212, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6374201..6374212, + |
Coexpression cluster: | MCL_coexpression_mm9:825 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.18e-18 | 4 |
myeloid leukocyte | 3.18e-18 | 4 |
phagocyte | 3.18e-18 | 4 |
monocyte | 3.18e-18 | 4 |
macrophage | 3.18e-18 | 4 |
tissue-resident macrophage | 3.18e-18 | 4 |
macrophage dendritic cell progenitor | 3.18e-18 | 4 |
monoblast | 3.18e-18 | 4 |
promonocyte | 3.18e-18 | 4 |
bone marrow cell | 1.17e-14 | 3 |
mesenchymal stem cell of the bone marrow | 1.17e-14 | 3 |
defensive cell | 1.69e-10 | 7 |
granulocyte monocyte progenitor cell | 1.69e-10 | 7 |
central nervous system macrophage | 5.16e-10 | 2 |
microglial cell | 5.16e-10 | 2 |
bone marrow macrophage | 7.03e-10 | 2 |
oligodendrocyte precursor cell | 4.06e-09 | 8 |
migratory neural crest cell | 2.56e-07 | 10 |
neuron associated cell | 2.56e-07 | 10 |
glial cell (sensu Vertebrata) | 2.56e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.56e-07 | 10 |
glial cell | 2.56e-07 | 10 |
glioblast | 2.56e-07 | 10 |
glioblast (sensu Vertebrata) | 2.56e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-13 | 16 |
mammary gland | 3.07e-10 | 2 |
external ectoderm | 3.07e-10 | 2 |
mammary bud | 3.07e-10 | 2 |
mammary ridge | 3.07e-10 | 2 |
mammary placode | 3.07e-10 | 2 |
bone element | 1.88e-09 | 22 |
skeletal element | 1.88e-09 | 22 |
skeletal system | 1.88e-09 | 22 |