FFCP PHASE1:Mm9::chr11:58198109..58198122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=314 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58198109..58198122,+ | |||
|description=CAGE_peak_at_chr11:58198109..58198122,+ | |description=CAGE_peak_at_chr11:58198109..58198122,+ | ||
|id=chr11:58198109..58198122,+ | |id=chr11:58198109..58198122,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.17e-11!9;CL:0002251!1.17e-11!9;CL:0000239!8.33e-09!6;CL:0000677!8.33e-09!6;CL:0000212!8.33e-09!6;CL:0000584!8.33e-09!6;CL:0000075!2.21e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.17e-11!9;CL:0002251!1.17e-11!9;CL:0000239!8.33e-09!6;CL:0000677!8.33e-09!6;CL:0000212!8.33e-09!6;CL:0000584!8.33e-09!6;CL:0000075!2.21e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.40e-14,9;CL:0002251,3.40e-14,9;CL:0000239,4.82e-13,6;CL:0000677,4.82e-13,6;CL:0000584,4.82e-13,6;CL:0000075,4.50e-11,7;CL:0000066,3.70e-08,25;CL:0002076,5.74e-08,15;CL:0000682,7.25e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.25e-31!59;UBERON:0000160!7.83e-27!43;UBERON:0000344!1.17e-19!15;UBERON:0001242!6.83e-17!13;UBERON:0000060!6.83e-17!13;UBERON:0001262!6.83e-17!13;UBERON:0004786!6.83e-17!13;UBERON:0004923!5.32e-12!24;UBERON:0003350!1.17e-11!9;UBERON:0004808!1.17e-11!9;UBERON:0001277!1.17e-11!9;UBERON:0001007!1.19e-10!128;UBERON:0001555!1.19e-10!128;UBERON:0007026!1.19e-10!128;UBERON:0004119!2.69e-10!130;UBERON:0000925!2.69e-10!130;UBERON:0006595!2.69e-10!130;UBERON:0004921!2.70e-09!126;UBERON:0004185!2.70e-09!126;UBERON:0000485!3.99e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.71e-50,47;UBERON:0000160,2.62e-50,31;UBERON:0000344,1.11e-26,15;UBERON:0001242,2.40e-22,13;UBERON:0001262,2.40e-22,13;UBERON:0004786,2.40e-22,13;UBERON:0001007,1.39e-18,116;UBERON:0001555,1.39e-18,116;UBERON:0007026,1.39e-18,116;UBERON:0004119,3.95e-18,118;UBERON:0000925,3.95e-18,118;UBERON:0006595,3.95e-18,118;UBERON:0004921,3.24e-16,114;UBERON:0004923,2.13e-15,24;UBERON:0003350,3.40e-14,9;UBERON:0004808,3.40e-14,9;UBERON:0001277,3.40e-14,9;UBERON:0000485,2.32e-11,11;UBERON:0002108,6.08e-10,4;UBERON:0000331,3.13e-08,3;UBERON:0002116,3.13e-08,3;UBERON:0001204,3.13e-08,3;UBERON:0001168,3.13e-08,3 | |||
|phase1_expression=0,6.63053274514786,7.73498706962211,7.25914107136392,4.00716583957078,3.86122325397347,11.4470193891808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6792574337539,8.02932483735095,1.14846392823004,5.1691439539089,7.75696437669201,27.1733489822615,9.57714493087737,15.0776747245607,0,0,0,2.3108129580102,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,7.45567044872489,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,15.4160882644542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,6.34681359992506,0,0.232236671860439,1.28867461322093,5.64713868945359,3.33567065767305,2.47293313946327,5.21981967698963,5.43506550589236,8.79673230800943,4.97391180102877,5.8489226135736,9.88701349519644,10.8069024937347,11.1519113022446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0,0.203319467126849,0.540026704109006,1.04544148007234,2.18362563746178,3.10187996685088,1.40510874733071,3.40282724579238,38.4956470676625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,6.63053274514786,7.73498706962211,7.25914107136392,4.00716583957078,3.86122325397347,11.4470193891808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6792574337539,8.02932483735095,1.14846392823004,5.1691439539089,7.75696437669201,27.1733489822615,9.57714493087737,15.0776747245607,0,0,0,2.3108129580102,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,7.45567044872489,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,15.4160882644542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,6.34681359992506,0,0.232236671860439,1.28867461322093,5.64713868945359,3.33567065767305,2.47293313946327,5.21981967698963,5.43506550589236,8.79673230800943,4.97391180102877,5.8489226135736,9.88701349519644,10.8069024937347,11.1519113022446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0,0.203319467126849,0.540026704109006,1.04544148007234,2.18362563746178,3.10187996685088,1.40510874733071,3.40282724579238,38.4956470676625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr11:58198109..58198122,+ | |short_description=p@chr11:58198109..58198122,+ | ||
}} | }} |
Latest revision as of 04:08, 6 August 2015
Short description: | p@chr11:58198109..58198122, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58198109..58198122, + |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.40e-14 | 9 |
epithelial cell of alimentary canal | 3.40e-14 | 9 |
brush border epithelial cell | 4.82e-13 | 6 |
gut absorptive cell | 4.82e-13 | 6 |
enterocyte | 4.82e-13 | 6 |
columnar/cuboidal epithelial cell | 4.50e-11 | 7 |
epithelial cell | 3.70e-08 | 25 |
endo-epithelial cell | 5.74e-08 | 15 |
M cell of gut | 7.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.71e-50 | 47 |
intestine | 2.62e-50 | 31 |
mucosa | 1.11e-26 | 15 |
intestinal mucosa | 2.40e-22 | 13 |
wall of intestine | 2.40e-22 | 13 |
gastrointestinal system mucosa | 2.40e-22 | 13 |
digestive system | 1.39e-18 | 116 |
digestive tract | 1.39e-18 | 116 |
primitive gut | 1.39e-18 | 116 |
endoderm-derived structure | 3.95e-18 | 118 |
endoderm | 3.95e-18 | 118 |
presumptive endoderm | 3.95e-18 | 118 |
subdivision of digestive tract | 3.24e-16 | 114 |
organ component layer | 2.13e-15 | 24 |
epithelium of mucosa | 3.40e-14 | 9 |
gastrointestinal system epithelium | 3.40e-14 | 9 |
intestinal epithelium | 3.40e-14 | 9 |
simple columnar epithelium | 2.32e-11 | 11 |
small intestine | 6.08e-10 | 4 |
ileal mucosa | 3.13e-08 | 3 |
ileum | 3.13e-08 | 3 |
mucosa of small intestine | 3.13e-08 | 3 |
wall of small intestine | 3.13e-08 | 3 |