FFCP PHASE1:Mm9::chr15:6385439..6385449,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=825 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:6385439..6385449,+ | |||
|description=CAGE_peak_at_chr15:6385439..6385449,+ | |description=CAGE_peak_at_chr15:6385439..6385449,+ | ||
|id=chr15:6385439..6385449,+ | |id=chr15:6385439..6385449,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.62e-30,3;CL:0002540,3.62e-30,3;CL:0002194,3.01e-22,4;CL:0000766,3.01e-22,4;CL:0000234,3.01e-22,4;CL:0000576,3.01e-22,4;CL:0000235,3.01e-22,4;CL:0000864,3.01e-22,4;CL:0002009,3.01e-22,4;CL:0000040,3.01e-22,4;CL:0000559,3.01e-22,4;CL:0002476,3.13e-20,2;CL:0000473,4.95e-13,7;CL:0000557,4.95e-13,7;CL:0002320,1.34e-07,46;CL:0000134,1.34e-07,46;CL:0000839,2.66e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.92e-22,16;UBERON:0001474,6.10e-16,22;UBERON:0004765,6.10e-16,22;UBERON:0001434,6.10e-16,22;UBERON:0002204,1.05e-14,32;UBERON:0000305,1.83e-11,1;UBERON:0002390,9.00e-08,45;UBERON:0003061,9.00e-08,45;UBERON:0002384,1.34e-07,46;UBERON:0002193,2.80e-07,48;UBERON:0002405,2.80e-07,48;UBERON:0003081,6.59e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,1.03134418455488,0,0,0,0,0,1.3498495759221,2.96659908770092,2.1314403448383,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,0.470354828542819,0.376999773989026,6.17987419335935,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.758168275301024,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0.350679099451593,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0.518054945597687,0,1.50791283939272,1.08781136763742,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,1.03134418455488,0,0,0,0,0,1.3498495759221,2.96659908770092,2.1314403448383,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,0.470354828542819,0.376999773989026,6.17987419335935,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.758168275301024,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0.350679099451593,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0.518054945597687,0,1.50791283939272,1.08781136763742,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr15:6385439..6385449,+ | |short_description=p@chr15:6385439..6385449,+ | ||
}} | }} |
Latest revision as of 09:00, 5 August 2015
Short description: | p@chr15:6385439..6385449, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6385439..6385449, + |
Coexpression cluster: | MCL_coexpression_mm9:825 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.62e-30 | 3 |
mesenchymal stem cell of the bone marrow | 3.62e-30 | 3 |
monopoietic cell | 3.01e-22 | 4 |
myeloid leukocyte | 3.01e-22 | 4 |
phagocyte | 3.01e-22 | 4 |
monocyte | 3.01e-22 | 4 |
macrophage | 3.01e-22 | 4 |
tissue-resident macrophage | 3.01e-22 | 4 |
macrophage dendritic cell progenitor | 3.01e-22 | 4 |
monoblast | 3.01e-22 | 4 |
promonocyte | 3.01e-22 | 4 |
bone marrow macrophage | 3.13e-20 | 2 |
defensive cell | 4.95e-13 | 7 |
granulocyte monocyte progenitor cell | 4.95e-13 | 7 |
connective tissue cell | 1.34e-07 | 46 |
mesenchymal cell | 1.34e-07 | 46 |
myeloid lineage restricted progenitor cell | 2.66e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.92e-22 | 16 |
bone element | 6.10e-16 | 22 |
skeletal element | 6.10e-16 | 22 |
skeletal system | 6.10e-16 | 22 |
musculoskeletal system | 1.05e-14 | 32 |
amnion | 1.83e-11 | 1 |
hematopoietic system | 9.00e-08 | 45 |
blood island | 9.00e-08 | 45 |
connective tissue | 1.34e-07 | 46 |
hemolymphoid system | 2.80e-07 | 48 |
immune system | 2.80e-07 | 48 |
lateral plate mesoderm | 6.59e-07 | 87 |