FFCP PHASE1:Mm9::chr11:62094942..62094958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72795 | |EntrezGene=72795 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CC21,Q9D857 | |UniProt=Q8CC21,Q9D857 | ||
|association_with_transcript=-16bp_to_ENSMUST00000136477,NM_028360,NM_029704,uc007jiq.2,uc007jir.2,uc007jis.2_5end | |association_with_transcript=-16bp_to_ENSMUST00000136477,NM_028360,NM_029704,uc007jiq.2,uc007jir.2,uc007jis.2_5end | ||
|cluster_id=chr11:62094942..62094958,+ | |||
|description=CAGE_peak_2_at_Ttc19_5end | |description=CAGE_peak_2_at_Ttc19_5end | ||
|id=chr11:62094942..62094958,+ | |id=chr11:62094942..62094958,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.47e-15!63;UBERON:0001049!2.29e-14!52;UBERON:0005068!2.29e-14!52;UBERON:0006241!2.29e-14!52;UBERON:0007135!2.29e-14!52;UBERON:0000955!5.78e-14!50;UBERON:0006238!5.78e-14!50;UBERON:0002616!2.33e-13!49;UBERON:0003056!9.54e-12!49;UBERON:0002346!4.29e-11!71;UBERON:0003075!4.29e-11!71;UBERON:0007284!4.29e-11!71;UBERON:0003080!4.29e-11!40;UBERON:0002780!1.65e-10!39;UBERON:0001890!1.65e-10!39;UBERON:0006240!1.65e-10!39;UBERON:0002020!1.81e-10!34;UBERON:0001017!1.55e-09!73;UBERON:0005743!1.55e-09!73;UBERON:0000073!1.28e-08!75;UBERON:0001016!1.28e-08!75;UBERON:0002791!1.42e-08!29;UBERON:0003528!1.42e-08!29;UBERON:0001893!1.42e-08!29;UBERON:0007811!1.77e-08!86;UBERON:0004121!3.86e-08!102;UBERON:0000924!3.86e-08!102;UBERON:0006601!3.86e-08!102;UBERON:0000153!9.68e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.04e-15,54;UBERON:0001049,2.20e-14,52;UBERON:0005068,2.20e-14,52;UBERON:0006241,2.20e-14,52;UBERON:0007135,2.20e-14,52;UBERON:0002346,9.85e-14,64;UBERON:0003075,9.85e-14,64;UBERON:0007284,9.85e-14,64;UBERON:0010371,1.04e-12,73;UBERON:0000955,2.09e-12,47;UBERON:0006238,2.09e-12,47;UBERON:0010314,2.58e-12,92;UBERON:0002616,8.09e-12,46;UBERON:0003056,9.21e-12,49;UBERON:0003080,4.14e-11,40;UBERON:0002780,1.60e-10,39;UBERON:0001890,1.60e-10,39;UBERON:0006240,1.60e-10,39;UBERON:0002020,1.75e-10,34;UBERON:0004121,1.10e-09,95;UBERON:0000924,1.10e-09,95;UBERON:0006601,1.10e-09,95;UBERON:0001017,1.66e-09,73;UBERON:0003528,1.38e-08,29;UBERON:0002791,1.38e-08,29;UBERON:0001893,1.38e-08,29;UBERON:0001016,1.48e-08,75 | |||
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|phase1_expression=2.7225304007815,4.18770489167233,4.09499315450582,4.23449895829562,3.50627010962443,4.70061961353291,2.80335168714631,1.16210991097419,1.54867594366833,3.27690336850791,1.19852577757853,1.99430397488341,1.36960583944965,1.48614684112296,0.666219523631325,0.607425802169478,2.79824751251259,1.10411757875383,1.23402990245165,1.69755860719212,5.95303031057488,1.98581902401771,1.56719873483361,2.3998863419011,3.21172993494038,4.01962374880514,3.4460959692726,2.37018355954478,2.28028103347649,3.52842181663903,3.32595765982957,1.27006134691926,1.84519436275371,15.8481681015439,3.75507105676657,1.16364251750945,5.3084032628216,0.418531630736908,0,0,0,0,0.485510353031154,0.377690453926732,2.02753862439029,1.65192076945513,1.56478268869608,1.52617609466313,0.439372365468944,1.74986909166855,1.39986421625363,4.31257693094915,1.67782606057736,1.45072428402269,1.00828139742739,0.514518872071894,2.0057340795713,1.03134418455488,4.85559506063035,2.64495489636016,2.53532561402472,2.37191172448392,0,0.449949858640699,0,0,0.299600110518405,2.68952813725088,2.90330914463737,3.10513658162888,2.94454945891935,4.85606673486466,5.52171352379034,3.1847607795888,3.06705507258356,2.75765635983006,4.40463523997555,12.896421146604,11.2132769277058,4.61602007055678,5.12330804173494,8.85552729946492,7.53794097303729,7.87867654044352,8.55670187550137,6.77645746589436,6.69146899755784,3.72798891650601,0.832988126665025,1.88928900266964,0.289864488701678,1.72084775396277,2.03991400112325,4.31762553310254,1.94932925234301,4.03224198387602,4.21333260395256,0.681721290312231,1.29893002301434,0.35333957451034,3.66192891419369,3.84979432242953,0,0,2.16491041011214,2.02687892380079,1.01104889002957,5.59501010623394,3.36619248741323,2.07818994690755,1.90833859442749,1.52232739156071,1.38369298353635,2.41156224884196,3.17489509266403,2.26199864393416,3.21353458054686,3.7595832799177,2.65383165584962,2.91180329905337,4.63767188766826,3.87900202508178,11.1835056730873,7.02673912827713,8.3778682725382,4.08731288333746,0.838705871541442,2.39961092397363,1.77898317902291,11.3840885947665,17.8425235099264,9.5497307605777,14.0797699355744,17.9000820131231,14.5451631191692,13.4660248346239,2.74966282395854,1.99051152976149,2.52722758433675,3.15662783829711,3.513251959993,2.06911893990126,3.24111833649629,3.76762044589288,4.28629944653366,3.58718416797579,3.65436725782942,4.39795730256327,2.80238390812695,3.21480336285293,3.69497360744293,1.97276159184817,1.39023624612799,2.43776516565517,2.46938563689532,2.58744546864041,0.702213187313235,1.02939162845886,0.852490498186778,3.10688658803253,2.34526059981096,3.42117916775928,4.02466050494857,2.95146347621106,3.23960937063494,3.25547522650571,3.21928081679543,4.2035523252181,6.7469538464527,3.447516745661,6.24229833503089,5.99419948443863,7.46470391989572,6.97873377553933,9.88362758251398,5.65975368086064,3.30418782983798,5.81791246659797,2.13288250535234,2.78684006232526,2.83508414908605,3.02525286935014,2.00140239460383,1.71203063501303,1.89811624617805,2.79988223030818,1.25667604400135,2.38747766449381,2.53453313254856,1.79763881730844,3.45820879799511,3.38540164532424,3.41402221715547,2.28497025219458,1.1270773567308,2.64746726198909,3.49114476901726,4.20814919341911,3.47800954183415,3.24742325555125,3.29697328466887,4.56569506510662,2.66807364378434,1.83529616287703,0.982794975566015,1.34917267430912,1.01430060694251,0.72353147925725,1.52775511068852,2.01387296215567,1.29708181420028,2.47105271869273,0,3.72140947668503,3.12037673114561,4.04126204715379,3.22915344339442,5.78932225636041,2.58654466233247,2.27389694124582,3.42226450528254,2.37643120085263,2.81628297946203,3.01511263395268,2.38043640886014,2.34160377429359,2.99506773801763,1.32878813789265,2.39182152986231,3.27726629431476,2.41758974612254,2.02508682014116,0,0.54390568381871,2.95058563811422,2.20749397043786,10.1146871692309,9.72856998715286,0.819674726883377,8.58401152494868,1.89304931649754,1.56175497718655,2.80050417052639,1.43381278771531,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,1.97643888973262,11.2462460747632,2.83880170416537,2.13678724400706,4.39794790254655,3.62934270539578,5.30980553359851,0.971122544619926,2.11626489875326,3.20628635585027,1.77181135728464,3.99665692327106,3.35956781118687,2.18120237686503,3.92147116223193,4.10847785316561,5.27093042874994,2.06271086496374,5.44703369206061,2.88097750450096,3.10460841078611,3.42939256050548,3.3694644392032,4.10248280484762,3.9491764944509,3.65357938937519,1.87737366450968,3.60114520468494,1.54369878638473,4.61681508236144,3.22928853391811,2.89502039655148,2.14870219205646,1.96969079694074,3.49777003955821,10.0129663085675,0.854354403989263,2.06386867963222,2.59272338317596,0.565105371014073,1.6403307326523,1.83022538565218,1.69978429993855,1.39951452323658,1.38199973804424,1.90934123603023,2.05618395827738,2.84647253977588,3.45617090629764,3.97267762427491,2.83871332870031,2.02296519577231,3.2234847732881,3.40282724579238,3.8884491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| ||
|short_description=p2@Ttc19 | |short_description=p2@Ttc19 | ||
}} | }} |
Latest revision as of 20:59, 1 October 2015
Short description: | p2@Ttc19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ttc19_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -16bp_to_ENSMUST00000136477, NM_028360, NM_029704, uc007jiq.2, uc007jir.2, uc007jis.2_5end |
EntrezGene: | Ttc19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.04e-15 | 54 |
neural tube | 2.20e-14 | 52 |
neural rod | 2.20e-14 | 52 |
future spinal cord | 2.20e-14 | 52 |
neural keel | 2.20e-14 | 52 |
neurectoderm | 9.85e-14 | 64 |
neural plate | 9.85e-14 | 64 |
presumptive neural plate | 9.85e-14 | 64 |
ecto-epithelium | 1.04e-12 | 73 |
brain | 2.09e-12 | 47 |
future brain | 2.09e-12 | 47 |
structure with developmental contribution from neural crest | 2.58e-12 | 92 |
regional part of brain | 8.09e-12 | 46 |
pre-chordal neural plate | 9.21e-12 | 49 |
anterior neural tube | 4.14e-11 | 40 |
regional part of forebrain | 1.60e-10 | 39 |
forebrain | 1.60e-10 | 39 |
future forebrain | 1.60e-10 | 39 |
gray matter | 1.75e-10 | 34 |
ectoderm-derived structure | 1.10e-09 | 95 |
ectoderm | 1.10e-09 | 95 |
presumptive ectoderm | 1.10e-09 | 95 |
central nervous system | 1.66e-09 | 73 |
brain grey matter | 1.38e-08 | 29 |
regional part of telencephalon | 1.38e-08 | 29 |
telencephalon | 1.38e-08 | 29 |
nervous system | 1.48e-08 | 75 |