FFCP PHASE1:Mm9::chr11:70250783..70250813,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216869 | |EntrezGene=216869 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000143232_5end | |association_with_transcript=0bp_to_ENSMUST00000143232_5end | ||
|cluster_id=chr11:70250783..70250813,+ | |||
|description=CAGE_peak_3_at_Arrb2_5end | |description=CAGE_peak_3_at_Arrb2_5end | ||
|id=chr11:70250783..70250813,+ | |id=chr11:70250783..70250813,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.20e-15,3;CL:0002540,3.20e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.82e-16,3;DOID:4045,1.82e-16,3;DOID:0050686,1.75e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.71e-07!22;UBERON:0004765!4.71e-07!22;UBERON:0001434!4.71e-07!22;UBERON:0003887!6.44e-07!10;UBERON:0002204!9.95e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000080,1.24e-11,4;UBERON:0005904,1.24e-11,4;UBERON:0006947,1.24e-11,4;UBERON:0002120,1.24e-11,4;UBERON:0004054,1.24e-11,4;UBERON:0004875,1.24e-11,4;UBERON:0004876,1.24e-11,4;UBERON:0005721,1.24e-11,4;UBERON:0005754,1.24e-11,4;UBERON:0007297,1.24e-11,4;UBERON:0002204,1.84e-11,32;UBERON:0003887,5.68e-08,10;UBERON:0001301,1.53e-07,3;UBERON:0006555,1.53e-07,3;UBERON:0005103,1.53e-07,3;UBERON:0000083,1.53e-07,3;UBERON:0009201,1.53e-07,3;UBERON:0004819,1.53e-07,3;UBERON:0006553,1.53e-07,3;UBERON:0003074,1.53e-07,3;UBERON:0003060,1.53e-07,3;UBERON:0001474,1.54e-07,22;UBERON:0004765,1.54e-07,22;UBERON:0001434,1.54e-07,22;UBERON:0002371,2.07e-07,16;UBERON:0000058,7.42e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0.262261207256992,0.666219523631325,0.202475267389826,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,214.706726568034,129.701667190951,183.233310390829,149.999029447909,133.876915051855,159.247395794218,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,2.6996991518442,1.97773272513395,1.4209602298922,1.79760066311043,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,5.30766331169925,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,2.27450482590307,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0.763877555344259,1.15078454980324,0.486405680325106,0,1.43768206527355,0.372140947668503,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,1.36696704638282,0.206386867963223,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0.262261207256992,0.666219523631325,0.202475267389826,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,214.706726568034,129.701667190951,183.233310390829,149.999029447909,133.876915051855,159.247395794218,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,2.6996991518442,1.97773272513395,1.4209602298922,1.79760066311043,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,5.30766331169925,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,2.27450482590307,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0.763877555344259,1.15078454980324,0.486405680325106,0,1.43768206527355,0.372140947668503,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,1.36696704638282,0.206386867963223,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421 | ||
|short_description=p3@Arrb2 | |short_description=p3@Arrb2 | ||
}} | }} |
Latest revision as of 14:30, 25 September 2015
Short description: | p3@Arrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000143232_5end |
EntrezGene: | Arrb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.20e-15 | 3 |
mesenchymal stem cell of the bone marrow | 3.20e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
mesonephros | 1.24e-11 | 4 |
duct of male reproductive system | 1.24e-11 | 4 |
male genital duct | 1.24e-11 | 4 |
pronephros | 1.24e-11 | 4 |
internal male genitalia | 1.24e-11 | 4 |
nephrogenic cord | 1.24e-11 | 4 |
urogenital ridge | 1.24e-11 | 4 |
pronephric mesoderm | 1.24e-11 | 4 |
rostral part of nephrogenic cord | 1.24e-11 | 4 |
presumptive pronephric mesoderm | 1.24e-11 | 4 |
musculoskeletal system | 1.84e-11 | 32 |
intraembryonic coelom | 5.68e-08 | 10 |
epididymis | 1.53e-07 | 3 |
excretory tube | 1.53e-07 | 3 |
mesonephric epithelium | 1.53e-07 | 3 |
mesonephric tubule | 1.53e-07 | 3 |
nephric duct | 1.53e-07 | 3 |
kidney epithelium | 1.53e-07 | 3 |
renal duct | 1.53e-07 | 3 |
mesonephric duct | 1.53e-07 | 3 |
pronephric duct | 1.53e-07 | 3 |
bone element | 1.54e-07 | 22 |
skeletal element | 1.54e-07 | 22 |
skeletal system | 1.54e-07 | 22 |
bone marrow | 2.07e-07 | 16 |
duct | 7.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.82e-16 | 3 |
muscle cancer | 1.82e-16 | 3 |
organ system cancer | 1.75e-08 | 6 |