FFCP PHASE1:Mm9::chr16:20364230..20364242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27416 | |EntrezGene=27416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENSMUST00000137985_5end | |association_with_transcript=30bp_to_ENSMUST00000137985_5end | ||
|cluster_id=chr16:20364230..20364242,- | |||
|description=CAGE_peak_7_at_Abcc5_5end | |description=CAGE_peak_7_at_Abcc5_5end | ||
|id=chr16:20364230..20364242,- | |id=chr16:20364230..20364242,- | ||
|ontology_enrichment_celltype=CL:0000473!2.14e-15!3;CL:0000627!2.14e-15!3;CL:0000682!2.14e-15!3;CL:0000239!4.12e-13!6;CL:0000677!4.12e-13!6;CL:0000212!4.12e-13!6;CL:0000584!4.12e-13!6;CL:0002563!4.54e-13!9;CL:0002251!4.54e-13!9;CL:0000066!2.47e-11!25;CL:0000075!2.91e-11!7;CL:0002076!8.93e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.70e-27,3;CL:0000239,9.11e-14,6;CL:0000677,9.11e-14,6;CL:0000584,9.11e-14,6;CL:0000066,1.49e-12,25;CL:0000473,5.73e-12,7;CL:0000075,6.80e-12,7;CL:0002563,2.18e-09,9;CL:0002251,2.18e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.21e-24!15;UBERON:0004923!1.83e-18!24;UBERON:0001242!4.93e-17!13;UBERON:0000060!4.93e-17!13;UBERON:0001262!4.93e-17!13;UBERON:0004786!4.93e-17!13;UBERON:0003350!4.54e-13!9;UBERON:0004808!4.54e-13!9;UBERON:0001277!4.54e-13!9;UBERON:0001962!3.40e-11!2;UBERON:0001961!3.40e-11!2;UBERON:0001744!3.40e-11!2;UBERON:0000485!1.15e-10!11;UBERON:0002465!9.79e-08!3;UBERON:0000160!1.41e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.04e-21,15;UBERON:0001962,3.08e-19,2;UBERON:0001961,3.08e-19,2;UBERON:0001744,3.08e-19,2;UBERON:0004923,3.44e-13,24;UBERON:0002465,3.66e-13,3;UBERON:0001242,4.46e-11,13;UBERON:0001262,4.46e-11,13;UBERON:0004786,4.46e-11,13;UBERON:0003199,2.01e-10,1;UBERON:0003350,2.18e-09,9;UBERON:0004808,2.18e-09,9;UBERON:0001277,2.18e-09,9;UBERON:0000485,8.74e-08,11 | |||
|phase1_expression=0,3.48975407639361,3.18499467572675,0,0,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91953021319121,9.86459908588831,2.29692785646008,4.73838195774982,2.15471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,3.18499467572675,0,0,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91953021319121,9.86459908588831,2.29692785646008,4.73838195774982,2.15471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Abcc5 | |short_description=p7@Abcc5 | ||
}} | }} |
Latest revision as of 17:46, 1 October 2015
Short description: | p7@Abcc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Abcc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | 30bp_to_ENSMUST00000137985_5end |
EntrezGene: | Abcc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.70e-27 | 3 |
brush border epithelial cell | 9.11e-14 | 6 |
gut absorptive cell | 9.11e-14 | 6 |
enterocyte | 9.11e-14 | 6 |
epithelial cell | 1.49e-12 | 25 |
defensive cell | 5.73e-12 | 7 |
columnar/cuboidal epithelial cell | 6.80e-12 | 7 |
intestinal epithelial cell | 2.18e-09 | 9 |
epithelial cell of alimentary canal | 2.18e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.04e-21 | 15 |
gut-associated lymphoid tissue | 3.08e-19 | 2 |
mucosa-associated lymphoid tissue | 3.08e-19 | 2 |
lymphoid tissue | 3.08e-19 | 2 |
organ component layer | 3.44e-13 | 24 |
lymphoid system | 3.66e-13 | 3 |
intestinal mucosa | 4.46e-11 | 13 |
wall of intestine | 4.46e-11 | 13 |
gastrointestinal system mucosa | 4.46e-11 | 13 |
egg chamber | 2.01e-10 | 1 |
epithelium of mucosa | 2.18e-09 | 9 |
gastrointestinal system epithelium | 2.18e-09 | 9 |
intestinal epithelium | 2.18e-09 | 9 |
simple columnar epithelium | 8.74e-08 | 11 |