FFCP PHASE1:Mm9::chr17:24610840..24610867,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319259 | |EntrezGene=319259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=209 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BV89 | |UniProt=Q8BV89 | ||
|association_with_transcript=11bp_to_ENSMUST00000054946,NM_175682,uc008awk.1_5end | |association_with_transcript=11bp_to_ENSMUST00000054946,NM_175682,uc008awk.1_5end | ||
|cluster_id=chr17:24610840..24610867,+ | |||
|description=CAGE_peak_1_at_9930021D14Rik_5end | |description=CAGE_peak_1_at_9930021D14Rik_5end | ||
|id=chr17:24610840..24610867,+ | |id=chr17:24610840..24610867,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.26e-16!33;CL:0000047!1.26e-16!33;CL:0000031!1.26e-16!33;CL:0000404!1.26e-16!33;CL:0000221!4.30e-15!44;CL:0000133!4.30e-15!44;CL:0002319!2.86e-14!43;CL:0000393!2.20e-13!39;CL:0000211!2.20e-13!39;CL:0000055!1.91e-11!50;CL:0000107!7.54e-09!9;CL:0000117!7.63e-09!23;CL:0000337!7.63e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.70e-20,9;CL:0000540,1.77e-14,33;CL:0000047,1.77e-14,33;CL:0000031,1.77e-14,33;CL:0000404,1.77e-14,33;CL:0000393,1.10e-11,39;CL:0000211,1.10e-11,39;CL:0000221,1.45e-11,44;CL:0000133,1.45e-11,44;CL:0002319,2.92e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.02e-20!102;UBERON:0000924!9.02e-20!102;UBERON:0006601!9.02e-20!102;UBERON:0000073!7.22e-19!75;UBERON:0001016!7.22e-19!75;UBERON:0001017!1.06e-17!73;UBERON:0005743!1.06e-17!73;UBERON:0003101!8.57e-12!16;UBERON:0000079!8.57e-12!16;UBERON:0003135!1.87e-11!15;UBERON:0000473!1.05e-10!14;UBERON:0000010!6.35e-10!11;UBERON:0000991!1.22e-09!18;UBERON:0005564!1.22e-09!18;UBERON:0004176!5.87e-09!17;UBERON:0009196!5.87e-09!17;UBERON:0009117!5.87e-09!17;UBERON:0003133!6.08e-09!24;UBERON:0002410!7.54e-09!9;UBERON:0005156!1.09e-08!26;UBERON:0000990!1.09e-08!26;UBERON:0001049!8.45e-08!52;UBERON:0005068!8.45e-08!52;UBERON:0006241!8.45e-08!52;UBERON:0007135!8.45e-08!52;UBERON:0002020!1.25e-07!34;UBERON:0002346!1.43e-07!71;UBERON:0003075!1.43e-07!71;UBERON:0007284!1.43e-07!71;UBERON:0000033!2.48e-07!63;UBERON:0000955!5.36e-07!50;UBERON:0006238!5.36e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.09e-22,15;UBERON:0003101,4.31e-21,16;UBERON:0000079,4.31e-21,16;UBERON:0000473,8.78e-21,14;UBERON:0002410,1.70e-20,9;UBERON:0000991,2.37e-18,18;UBERON:0005564,2.37e-18,18;UBERON:0003133,1.19e-17,24;UBERON:0004176,1.16e-16,17;UBERON:0009196,1.16e-16,17;UBERON:0009117,1.16e-16,17;UBERON:0000010,1.90e-16,11;UBERON:0005156,4.92e-16,26;UBERON:0000990,4.92e-16,26;UBERON:0002553,1.47e-09,39;UBERON:0003886,1.51e-08,38;UBERON:0004121,2.15e-08,95;UBERON:0000924,2.15e-08,95;UBERON:0006601,2.15e-08,95;UBERON:0010313,5.59e-08,3;UBERON:0002342,5.59e-08,3;UBERON:0002005,5.59e-08,3;UBERON:0000011,5.59e-08,3;UBERON:0005428,5.59e-08,3;UBERON:0005062,5.59e-08,3;UBERON:0001017,6.84e-08,73;UBERON:0000013,1.01e-07,3;UBERON:0001016,1.45e-07,75;UBERON:0002323,1.63e-07,37;UBERON:0004458,1.63e-07,37 | |||
|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,3.14216082844184,3.3130281142742,0.122490799214954,0.287536413054709,0,2.20231761998777,0.893811366596314,0.46081959976873,0.395658863190582,0.182975287204819,0,1.67509799400829,1.68828783009504,0.61119299110724,0.883885756421003,0.854230084794618,0.372798891650601,0.832988126665025,0.68014404096107,0,0,0,0,0,0,0.842666520790511,0,0,0,11.5491604216878,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0,0,0.150722640552623,0.823120949949934,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,0.915001205637253,0,0.347648640384553,0,0.41557608911912,0.162241263067758,0.305518091550949,8.08645308965605,3.0326731012041,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91764273019036,2.20749397043786,1.60550589987792,0.468846746368813,0,0,3.15508219416257,4.68526493155966,12.4945570685023,6.93009514062401,4.90157082981267,5.94460714656548,6.47697122679831,3.21481443702443,4.34816555741176,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.477489376012546,0.492422699235184,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,1.24267862617385,0.56369293868419,8.37292657846281,12.7403037651965,9.13920585217024,14.2075805825504,18.0783054275133,11.5010093872839,9.50492009360836,9.22762230946256,7.48910774560619,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,2.14368379079066,0,0,0.920650473014354,0,1.03111909406213,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,3.14216082844184,3.3130281142742,0.122490799214954,0.287536413054709,0,2.20231761998777,0.893811366596314,0.46081959976873,0.395658863190582,0.182975287204819,0,1.67509799400829,1.68828783009504,0.61119299110724,0.883885756421003,0.854230084794618,0.372798891650601,0.832988126665025,0.68014404096107,0,0,0,0,0,0,0.842666520790511,0,0,0,11.5491604216878,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0,0,0.150722640552623,0.823120949949934,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,0.915001205637253,0,0.347648640384553,0,0.41557608911912,0.162241263067758,0.305518091550949,8.08645308965605,3.0326731012041,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91764273019036,2.20749397043786,1.60550589987792,0.468846746368813,0,0,3.15508219416257,4.68526493155966,12.4945570685023,6.93009514062401,4.90157082981267,5.94460714656548,6.47697122679831,3.21481443702443,4.34816555741176,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.477489376012546,0.492422699235184,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,1.24267862617385,0.56369293868419,8.37292657846281,12.7403037651965,9.13920585217024,14.2075805825504,18.0783054275133,11.5010093872839,9.50492009360836,9.22762230946256,7.48910774560619,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,2.14368379079066,0,0,0.920650473014354,0,1.03111909406213,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p1@9930021D14Rik | |short_description=p1@9930021D14Rik | ||
}} | }} |
Latest revision as of 01:31, 26 September 2015
Short description: | p1@9930021D14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9930021D14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:209 |
Association with transcript: | 11bp_to_ENSMUST00000054946, NM_175682, uc008awk.1_5end |
EntrezGene: | 9930021D14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.70e-20 | 9 |
neuron | 1.77e-14 | 33 |
neuronal stem cell | 1.77e-14 | 33 |
neuroblast | 1.77e-14 | 33 |
electrically signaling cell | 1.77e-14 | 33 |
electrically responsive cell | 1.10e-11 | 39 |
electrically active cell | 1.10e-11 | 39 |
ectodermal cell | 1.45e-11 | 44 |
neurectodermal cell | 1.45e-11 | 44 |
neural cell | 2.92e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.09e-22 | 15 |
male organism | 4.31e-21 | 16 |
male reproductive system | 4.31e-21 | 16 |
testis | 8.78e-21 | 14 |
autonomic nervous system | 1.70e-20 | 9 |
gonad | 2.37e-18 | 18 |
gonad primordium | 2.37e-18 | 18 |
reproductive organ | 1.19e-17 | 24 |
external genitalia | 1.16e-16 | 17 |
indifferent external genitalia | 1.16e-16 | 17 |
indifferent gonad | 1.16e-16 | 17 |
peripheral nervous system | 1.90e-16 | 11 |
reproductive structure | 4.92e-16 | 26 |
reproductive system | 4.92e-16 | 26 |
anatomical cavity | 1.47e-09 | 39 |
body cavity precursor | 1.51e-08 | 38 |
ectoderm-derived structure | 2.15e-08 | 95 |
ectoderm | 2.15e-08 | 95 |
presumptive ectoderm | 2.15e-08 | 95 |
neural crest-derived structure | 5.59e-08 | 3 |
neural crest | 5.59e-08 | 3 |
enteric nervous system | 5.59e-08 | 3 |
parasympathetic nervous system | 5.59e-08 | 3 |
vagal neural crest | 5.59e-08 | 3 |
neural fold | 5.59e-08 | 3 |
central nervous system | 6.84e-08 | 73 |
sympathetic nervous system | 1.01e-07 | 3 |
nervous system | 1.45e-07 | 75 |
body cavity | 1.63e-07 | 37 |
body cavity or lining | 1.63e-07 | 37 |