FFCP PHASE1:Hg19::chr11:122852529..122852549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390259 | |EntrezGene=390259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20450 | |HGNC=20450 | ||
|TSSclassifier=strong | |||
|UniProt=Q3C1V8 | |UniProt=Q3C1V8 | ||
|association_with_transcript=-101bp_to_ENST00000343035_5end | |association_with_transcript=-101bp_to_ENST00000343035_5end | ||
|cluster_id=chr11:122852529..122852549,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_BSX_5end | |description=CAGE_peak_1_at_BSX_5end | ||
|id=chr11:122852529..122852549,- | |id=chr11:122852529..122852549,- | ||
|ontology_enrichment_celltype=CL:0002322!1.65e-15!5 | |ontology_enrichment_celltype=CL:0002322!1.65e-15!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3347!6.31e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:154;1.17e-17;2!DOID:4236;1.17e-17;2!DOID:5409;1.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.07e-17,2;DOID:4236,1.07e-17,2;DOID:5409,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003296!1.06e-34!4;UBERON:0010133!1.06e-34!4;UBERON:0001894!5.85e-20!7;UBERON:0006222!5.85e-20!7;UBERON:0001049!1.49e-18!57;UBERON:0005068!1.49e-18!57;UBERON:0006241!1.49e-18!57;UBERON:0007135!1.49e-18!57;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0002780!3.38e-18!41;UBERON:0001890!3.38e-18!41;UBERON:0006240!3.38e-18!41;UBERON:0000007!5.28e-18!2;UBERON:0003080!9.72e-18!42;UBERON:0003075!3.11e-16!86;UBERON:0007284!3.11e-16!86;UBERON:0005743!5.08e-16!86;UBERON:0002346!2.06e-15!90;UBERON:0002616!5.94e-15!59;UBERON:0001017!1.73e-14!82;UBERON:0003056!2.47e-14!61;UBERON:0000073!2.62e-14!94;UBERON:0001016!2.62e-14!94;UBERON:0000955!2.33e-12!69;UBERON:0006238!2.33e-12!69;UBERON:0002771!9.70e-12!3;UBERON:0007023!6.35e-10!115;UBERON:0001871!1.09e-09!7;UBERON:0002336!2.67e-09!1;UBERON:0001018!2.67e-09!1;UBERON:0002473!2.67e-09!1;UBERON:0005340!2.67e-09!1;UBERON:0002316!2.67e-09!1;UBERON:0003544!2.67e-09!1;UBERON:0001020!2.67e-09!1;UBERON:0005970!2.67e-09!1;UBERON:0002437!2.67e-09!1;UBERON:0002791!3.69e-08!33;UBERON:0002020!5.42e-08!34;UBERON:0003528!5.42e-08!34;UBERON:0001893!6.51e-08!34;UBERON:0000033!1.64e-07!123;UBERON:0000153!4.48e-07!129;UBERON:0007811!4.48e-07!129;UBERON:0004121!5.31e-07!169;UBERON:0000924!8.69e-07!173;UBERON:0006601!8.69e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.28e-74;4!UBERON:0010133;2.28e-74;4!UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0001894;5.61e-43;7!UBERON:0002784;4.28e-34;4!UBERON:0002360;8.34e-18;2!UBERON:0000094;8.34e-18;2!UBERON:0010743;8.34e-18;2!UBERON:0000007;1.17e-17;2!UBERON:0002368;4.90e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.58e-74,4;UBERON:0010133,2.58e-74,4;UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0001894,6.03e-43,7;UBERON:0006222,6.03e-43,7;UBERON:0002784,4.28e-34,4;UBERON:0002360,9.07e-18,2;UBERON:0000094,9.07e-18,2;UBERON:0010743,9.07e-18,2;UBERON:0000007,1.27e-17,2;UBERON:0002368,2.89e-09,35;UBERON:0002780,7.76e-08,41;UBERON:0001890,7.76e-08,41;UBERON:0003080,7.76e-08,41;UBERON:0006240,7.76e-08,41;UBERON:0000949,2.33e-07,45;UBERON:0001017,6.43e-07,81 | |||
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|short_description=p1@BSX | |short_description=p1@BSX | ||
}} | }} |
Latest revision as of 08:56, 16 September 2015
Short description: | p1@BSX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BSX_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -101bp_to_ENST00000343035_5end |
EntrezGene: | BSX |
HGNC: | 20450 |
UniProt: | Q3C1V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.58e-74 | 4 |
neuroendocrine gland | 2.58e-74 | 4 |
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
diencephalon | 6.03e-43 | 7 |
future diencephalon | 6.03e-43 | 7 |
regional part of diencephalon | 4.28e-34 | 4 |
meninx | 9.07e-18 | 2 |
membrane organ | 9.07e-18 | 2 |
meningeal cluster | 9.07e-18 | 2 |
pituitary gland | 1.27e-17 | 2 |
endocrine gland | 2.89e-09 | 35 |
regional part of forebrain | 7.76e-08 | 41 |
forebrain | 7.76e-08 | 41 |
anterior neural tube | 7.76e-08 | 41 |
future forebrain | 7.76e-08 | 41 |
endocrine system | 2.33e-07 | 45 |
central nervous system | 6.43e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.07e-17 | 2 |
carcinosarcoma | 1.07e-17 | 2 |
lung small cell carcinoma | 1.32e-09 | 4 |