FFCP PHASE1:Hg19::chr11:123276174..123276187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:123276174..123276187,+ | |||
|coexpression_cluster_id=C1619 | |||
|description=CAGE_peak_at_chr11:123276174..123276187,+ | |description=CAGE_peak_at_chr11:123276174..123276187,+ | ||
|id=chr11:123276174..123276187,+ | |id=chr11:123276174..123276187,+ | ||
|ontology_enrichment_celltype=CL:0000047!8.87e-23!8;CL:0000540!1.80e-17!6;CL:0000031!1.80e-17!6;CL:0000404!1.80e-17!6;CL:0002319!2.09e-10!25 | |ontology_enrichment_celltype=CL:0000047!8.87e-23!8;CL:0000540!1.80e-17!6;CL:0000031!1.80e-17!6;CL:0000404!1.80e-17!6;CL:0002319!2.09e-10!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.05e-15;6!CL:0000404;1.05e-15;6!CL:0002319;1.49e-13;25!CL:0000047;2.07e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-25,8;CL:0000540,9.74e-16,6;CL:0000031,9.74e-16,6;CL:0000404,9.74e-16,6;CL:0002319,1.44e-13,25 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.10e-23;1!CL:0000031;1.05e-15;6!UBERON:0006238;5.00e-09;10!UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4 | |||
|ontology_enrichment_disease=DOID:114!7.61e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.19e-22!2;UBERON:0002757!1.19e-22!2;UBERON:0010134!1.19e-22!2;UBERON:0002784!1.19e-22!2;UBERON:0005408!1.19e-22!2;UBERON:0001899!1.19e-22!2;UBERON:0001017!1.61e-14!82;UBERON:0005743!8.61e-14!86;UBERON:0002146!1.40e-12!1;UBERON:0005623!1.40e-12!1;UBERON:0000073!2.27e-12!94;UBERON:0001016!2.27e-12!94;UBERON:0003296!7.95e-12!4;UBERON:0010133!7.95e-12!4;UBERON:0004121!1.29e-07!169;UBERON:0000924!2.11e-07!173;UBERON:0006601!2.11e-07!173;UBERON:0001894!3.91e-07!7;UBERON:0006222!3.91e-07!7;UBERON:0000955!5.33e-07!69;UBERON:0006238!5.33e-07!69;UBERON:0007100!9.28e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;4.10e-23;1!UBERON:0005623;4.10e-23;1!UBERON:0002114;9.66e-09;2!UBERON:0003978;1.30e-08;3!UBERON:0000946;1.30e-08;3!UBERON:0000922;7.80e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,4.10e-23,1;UBERON:0005623,4.10e-23,1;UBERON:0001017,1.36e-09,81;UBERON:0002114,9.66e-09,2;UBERON:0001016,1.20e-08,89;UBERON:0003978,1.30e-08,3;UBERON:0009751,1.30e-08,3;UBERON:0000946,1.30e-08,3;UBERON:0002523,1.30e-08,3;UBERON:0005983,1.30e-08,3;UBERON:0002165,1.30e-08,3;UBERON:0002062,1.30e-08,3;UBERON:0007280,1.30e-08,3 | |||
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|short_description=p@chr11:123276174..123276187,+ | |short_description=p@chr11:123276174..123276187,+ | ||
}} | }} |
Latest revision as of 19:24, 23 July 2015
Short description: | p@chr11:123276174..123276187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:123276174..123276187, + |
Coexpression cluster: | C1619_medulloblastoma_occipital_duodenum_Neural_parietal_temporal_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-25 | 8 |
neuron | 9.74e-16 | 6 |
neuroblast | 9.74e-16 | 6 |
electrically signaling cell | 9.74e-16 | 6 |
neural cell | 1.44e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 4.10e-23 | 1 |
semi-lunar valve | 4.10e-23 | 1 |
central nervous system | 1.36e-09 | 81 |
duodenum | 9.66e-09 | 2 |
nervous system | 1.20e-08 | 89 |
valve | 1.30e-08 | 3 |
cardiac mesenchyme | 1.30e-08 | 3 |
cardial valve | 1.30e-08 | 3 |
tunica intima | 1.30e-08 | 3 |
heart layer | 1.30e-08 | 3 |
endocardium | 1.30e-08 | 3 |
endocardial cushion | 1.30e-08 | 3 |
presumptive endocardium | 1.30e-08 | 3 |