FFCP PHASE1:Mm9::chr17:39984998..39985000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39984998..39985000,+ | |||
|description=CAGE_peak_at_chr17:39984998..39985000,+ | |description=CAGE_peak_at_chr17:39984998..39985000,+ | ||
|id=chr17:39984998..39985000,+ | |id=chr17:39984998..39985000,+ | ||
|ontology_enrichment_celltype=CL:0000548!7.58e-16!115;CL:0000004!7.58e-16!115;CL:0000255!7.58e-16!115;CL:0002371!3.82e-15!118;CL:0000144!1.01e-13!121;CL:0000012!1.01e-13!121;CL:0002321!6.99e-12!70;CL:0000220!6.99e-12!70;CL:0000034!4.39e-11!97;CL:0000723!7.13e-11!91;CL:0000048!7.13e-11!91;CL:0000055!7.07e-08!50;CL:0002319!9.52e-08!43;CL:0000219!2.44e-07!54;CL:0000221!3.25e-07!44;CL:0000133!3.25e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.48e-13,97;CL:0002321,1.38e-12,70;CL:0000723,1.11e-10,91;CL:0000048,1.11e-10,91;CL:0000219,1.39e-10,54;CL:0000107,3.99e-10,9;CL:0002320,5.07e-09,46;CL:0000134,5.07e-09,46;CL:0000223,5.50e-08,20;CL:0002293,1.26e-07,3;CL:0000349,1.38e-07,3;CL:0000351,1.38e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.99e-10,9;UBERON:0002384,5.07e-09,46;UBERON:0000010,4.52e-08,11;UBERON:0000358,1.38e-07,3;UBERON:0000307,1.38e-07,3;UBERON:0007010,1.38e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0,1.86890112476421,0,0.703943610758334,1.40438715793196,0,0.717949430958028,0.513602189793617,0.34968160967599,0.666219523631325,1.21485160433896,1.39912375625629,0.630924330716475,1.09691546884591,0.84877930359606,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.570070258369122,0,0,6.98533740805594,0.61506478758457,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0.503587271902309,0.202753862439029,0,5.47673941043627,0,0.659058548203415,0.388859798148567,1.81982348112971,2.87505128729943,0.167782606057736,2.17608642603403,1.68046899571232,0.514518872071894,0.85960031981627,2.57836046138721,0.606949382578793,1.05798195854407,0,1.69422266034566,1.77858959222228,0.899899717281399,2.96659908770092,1.4209602298922,1.19840044207362,1.15265491596466,0.311068836925433,0.540023753326763,0.420649922702764,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0.919218786610021,2.20231761998777,0.127687338085188,0.46081959976873,0.659431438650969,0.182975287204819,1.04182674111352,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.372798891650601,0,0.453429360640713,0.869593466105033,0,2.03991400112325,1.07940638327563,2.59910566979068,2.24013443548668,0.140444420131752,0,0.519572009205738,0.35333957451034,0,3.84979432242953,15.2883143823987,49.7746692207332,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0,0.702213187313235,0,0.284163499395593,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0,0.793351699990633,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,1.42358718463353,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0.500535317148282,0.393117990226406,0.449724224769707,0,0,0,0,0,0,5.75072826109418,0,0,0.505157755894224,0.179397413521912,0,0,0.37898282354097,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,1.08781136763742,0.491764273019036,0,0,0,0.163934945376675,0,1.26203287766503,2.34263246577983,2.36965737506079,0.716906393857656,0.891194696329576,8.77537245445381,1.61924280669958,1.46127928955656,1.97643888973262,0,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.535106452806212,0,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.492422699235184,0.291480836629851,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,12.4312133889476,8.61253023450967,6.71538465456314,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0,0.906284817968409,0,0,0,0.170733605754134,0,0,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.114870937911227,0,0.347652977834566,0.964546102318525,0,0.735994600671987,1.37147700954166,0.532427418478012,0.953744759789284,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0.118635018124174,0.492522411877817,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0,1.86890112476421,0,0.703943610758334,1.40438715793196,0,0.717949430958028,0.513602189793617,0.34968160967599,0.666219523631325,1.21485160433896,1.39912375625629,0.630924330716475,1.09691546884591,0.84877930359606,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.570070258369122,0,0,6.98533740805594,0.61506478758457,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0.503587271902309,0.202753862439029,0,5.47673941043627,0,0.659058548203415,0.388859798148567,1.81982348112971,2.87505128729943,0.167782606057736,2.17608642603403,1.68046899571232,0.514518872071894,0.85960031981627,2.57836046138721,0.606949382578793,1.05798195854407,0,1.69422266034566,1.77858959222228,0.899899717281399,2.96659908770092,1.4209602298922,1.19840044207362,1.15265491596466,0.311068836925433,0.540023753326763,0.420649922702764,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0.919218786610021,2.20231761998777,0.127687338085188,0.46081959976873,0.659431438650969,0.182975287204819,1.04182674111352,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.372798891650601,0,0.453429360640713,0.869593466105033,0,2.03991400112325,1.07940638327563,2.59910566979068,2.24013443548668,0.140444420131752,0,0.519572009205738,0.35333957451034,0,3.84979432242953,15.2883143823987,49.7746692207332,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0,0.702213187313235,0,0.284163499395593,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0,0.793351699990633,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,1.42358718463353,0,0.251335208800269,0,0,0,0,0.398282546508734,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0.500535317148282,0.393117990226406,0.449724224769707,0,0,0,0,0,0,5.75072826109418,0,0,0.505157755894224,0.179397413521912,0,0,0.37898282354097,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,1.08781136763742,0.491764273019036,0,0,0,0.163934945376675,0,1.26203287766503,2.34263246577983,2.36965737506079,0.716906393857656,0.891194696329576,8.77537245445381,1.61924280669958,1.46127928955656,1.97643888973262,0,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.535106452806212,0,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.492422699235184,0.291480836629851,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,12.4312133889476,8.61253023450967,6.71538465456314,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0,0.906284817968409,0,0,0,0.170733605754134,0,0,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.114870937911227,0,0.347652977834566,0.964546102318525,0,0.735994600671987,1.37147700954166,0.532427418478012,0.953744759789284,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0.118635018124174,0.492522411877817,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr17:39984998..39985000,+ | |short_description=p@chr17:39984998..39985000,+ | ||
}} | }} |
Latest revision as of 21:27, 4 August 2015
Short description: | p@chr17:39984998..39985000, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39984998..39985000, + |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.48e-13 | 97 |
embryonic cell | 1.38e-12 | 70 |
somatic stem cell | 1.11e-10 | 91 |
multi fate stem cell | 1.11e-10 | 91 |
motile cell | 1.39e-10 | 54 |
autonomic neuron | 3.99e-10 | 9 |
connective tissue cell | 5.07e-09 | 46 |
mesenchymal cell | 5.07e-09 | 46 |
endodermal cell | 5.50e-08 | 20 |
epithelial cell of thymus | 1.26e-07 | 3 |
extraembryonic cell | 1.38e-07 | 3 |
trophoblast cell | 1.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.99e-10 | 9 |
connective tissue | 5.07e-09 | 46 |
peripheral nervous system | 4.52e-08 | 11 |
blastocyst | 1.38e-07 | 3 |
blastula | 1.38e-07 | 3 |
cleaving embryo | 1.38e-07 | 3 |