FFCP PHASE1:Hg19::chr11:2016672..2016677,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_BC106079_5end | |association_with_transcript=66bp_to_BC106079_5end | ||
|cluster_id=chr11:2016672..2016677,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_11_at_BC106079_5end | |description=CAGE_peak_11_at_BC106079_5end | ||
|id=chr11:2016672..2016677,- | |id=chr11:2016672..2016677,- | ||
|ontology_enrichment_celltype=CL:0002541!1.48e-08!3 | |ontology_enrichment_celltype=CL:0002541!1.48e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.40e-25;19!CL:0002536;3.23e-16;2!CL:0002537;1.56e-14;5!CL:0002541;1.93e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.61e-25,19;CL:0002536,2.03e-16,2;CL:0002537,1.75e-14,5;CL:0002541,1.84e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.88e-09;1!UBERON:0000358;4.03e-09;1!UBERON:0003124;8.16e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.44e-22!9;UBERON:0005631!1.76e-21!14;UBERON:0000158!1.76e-21!14;UBERON:0001557!1.46e-17!19;UBERON:0000478!3.66e-16!24;UBERON:0003124!2.96e-13!7;UBERON:0000305!5.26e-10!7;UBERON:0000072!4.09e-09!46;UBERON:0000077!4.86e-09!130;UBERON:0001723!1.03e-08!3;UBERON:0001033!1.03e-08!3;UBERON:0010056!1.03e-08!3;UBERON:0004871!1.09e-08!8;UBERON:0000476!1.48e-08!3;UBERON:0000920!1.48e-08!3;UBERON:0002300!1.56e-08!3;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0004923!1.24e-07!57;UBERON:0000065!1.91e-07!53;UBERON:0004921!2.23e-07!129;UBERON:0004185!2.23e-07!129;UBERON:0003103!2.66e-07!69;UBERON:0008947!3.37e-07!38;UBERON:0003258!3.37e-07!38;UBERON:0004119!4.35e-07!169;UBERON:0000925!4.35e-07!169;UBERON:0006595!4.35e-07!169;UBERON:0001041!4.90e-07!98;UBERON:0000926!6.38e-07!448;UBERON:0004120!6.38e-07!448;UBERON:0006603!6.38e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.37e-37;10!UBERON:0000158;5.37e-37;10!UBERON:0000478;1.86e-30;24!UBERON:0000305;2.69e-27;7!UBERON:0003124;1.93e-11;3!UBERON:0000920;1.93e-11;3!UBERON:0002426;1.60e-09;1!UBERON:0003831;1.60e-09;1!UBERON:0003898;1.60e-09;1!UBERON:0004830;1.60e-09;1!UBERON:0003830;1.60e-09;1!UBERON:0005175;1.60e-09;1!UBERON:0001774;1.60e-09;1!UBERON:0001103;1.60e-09;1!UBERON:0002084;1.88e-09;1!UBERON:0002082;1.88e-09;1!UBERON:0001052;1.12e-08;4!UBERON:0001987;1.20e-08;4!UBERON:0001737;3.17e-08;9!UBERON:0001557;3.17e-08;9!UBERON:0004907;4.16e-07;5!UBERON:0000945;5.15e-07;5!UBERON:0010039;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.68e-43,14;UBERON:0000158,2.68e-43,14;UBERON:0000478,1.59e-30,24;UBERON:0000305,2.23e-27,7;UBERON:0004871,5.95e-24,8;UBERON:0003124,4.58e-18,7;UBERON:0000920,1.84e-11,3;UBERON:0002426,1.60e-09,1;UBERON:0003831,1.60e-09,1;UBERON:0003898,1.60e-09,1;UBERON:0004830,1.60e-09,1;UBERON:0003830,1.60e-09,1;UBERON:0005175,1.60e-09,1;UBERON:0001774,1.60e-09,1;UBERON:0001103,1.60e-09,1;UBERON:0010084,1.60e-09,1;UBERON:0002084,1.74e-09,1;UBERON:0002082,1.74e-09,1;UBERON:0010226,1.74e-09,1;UBERON:0001987,1.07e-08,4;UBERON:0004340,1.07e-08,4;UBERON:0001052,1.30e-08,4;UBERON:0001737,3.06e-08,9;UBERON:0004923,3.85e-08,66;UBERON:0004907,4.70e-07,5 | |||
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| ||
|short_description=p11@BC106079 | |short_description=p11@BC106079 | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p11@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 66bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.61e-25 | 19 |
amniotic epithelial cell | 2.03e-16 | 2 |
amnion mesenchymal stem cell | 1.75e-14 | 5 |
chorionic membrane mesenchymal stem cell | 1.84e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.68e-43 | 14 |
membranous layer | 2.68e-43 | 14 |
extraembryonic structure | 1.59e-30 | 24 |
amnion | 2.23e-27 | 7 |
somatic layer of lateral plate mesoderm | 5.95e-24 | 8 |
chorion | 4.58e-18 | 7 |
egg chorion | 1.84e-11 | 3 |
chest muscle | 1.60e-09 | 1 |
respiratory system muscle | 1.60e-09 | 1 |
skeletal muscle of trunk | 1.60e-09 | 1 |
respiratory system skeletal muscle | 1.60e-09 | 1 |
thoracic segment muscle | 1.60e-09 | 1 |
chest organ | 1.60e-09 | 1 |
muscle of trunk | 1.60e-09 | 1 |
diaphragm | 1.60e-09 | 1 |
future diaphragm | 1.60e-09 | 1 |
heart left ventricle | 1.74e-09 | 1 |
cardiac ventricle | 1.74e-09 | 1 |
future cardiac ventricle | 1.74e-09 | 1 |
placenta | 1.07e-08 | 4 |
allantois | 1.07e-08 | 4 |
rectum | 1.30e-08 | 4 |
larynx | 3.06e-08 | 9 |
organ component layer | 3.85e-08 | 66 |
lower digestive tract | 4.70e-07 | 5 |