FFCP PHASE1:Hg19::chr11:207477..207496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60626 | |EntrezGene=60626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29550 | |HGNC=29550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000526104_5end | |association_with_transcript=-14bp_to_ENST00000526104_5end | ||
|cluster_id=chr11:207477..207496,+ | |||
|description=CAGE_peak_4_at_RIC8A_5end | |description=CAGE_peak_4_at_RIC8A_5end | ||
|id=chr11:207477..207496,+ | |id=chr11:207477..207496,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.07e-13!679;CL:0000004!2.07e-13!679;CL:0000255!2.07e-13!679;CL:0000012!1.60e-12!682;CL:0000220!5.24e-12!246;CL:0002321!9.13e-12!248;CL:0000055!9.79e-11!180;CL:0002371!1.55e-10!591;CL:0000144!5.29e-10!625;CL:0000066!5.74e-08!254;CL:0000003!3.53e-07!722;CL:0000192!4.59e-07!42;CL:0000514!4.59e-07!42 | |ontology_enrichment_celltype=CL:0000548!2.07e-13!679;CL:0000004!2.07e-13!679;CL:0000255!2.07e-13!679;CL:0000012!1.60e-12!682;CL:0000220!5.24e-12!246;CL:0002321!9.13e-12!248;CL:0000055!9.79e-11!180;CL:0002371!1.55e-10!591;CL:0000144!5.29e-10!625;CL:0000066!5.74e-08!254;CL:0000003!3.53e-07!722;CL:0000192!4.59e-07!42;CL:0000514!4.59e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.14e-07;55!CL:0000048;2.51e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.81e-10,250;CL:0000192,1.97e-07,43;CL:0000514,1.97e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!2.05e-10!626;UBERON:0000467!3.91e-10!625;UBERON:0000468!6.64e-10!659;UBERON:0000923!2.21e-08!604;UBERON:0005291!2.21e-08!604;UBERON:0006598!2.21e-08!604;UBERON:0002532!2.21e-08!604;UBERON:0002050!2.35e-08!605;UBERON:0005423!2.35e-08!605;UBERON:0005256!2.43e-08!143;UBERON:0000926!2.60e-08!448;UBERON:0004120!2.60e-08!448;UBERON:0006603!2.60e-08!448;UBERON:0001048!4.61e-08!168;UBERON:0000922!4.92e-08!612;UBERON:0005156!2.24e-07!59;UBERON:0000990!2.24e-07!59;UBERON:0002100!2.57e-07!216;UBERON:0000475!4.44e-07!365;UBERON:0000481!4.58e-07!347;UBERON:0003104!5.28e-07!238;UBERON:0009142!5.28e-07!238;UBERON:0000062!8.46e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.43e-07,59;UBERON:0000990,1.43e-07,59;UBERON:0005631,2.05e-07,14;UBERON:0000158,2.05e-07,14;UBERON:0001048,5.41e-07,160 | |||
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| ||
|short_description=p4@RIC8A | |short_description=p4@RIC8A | ||
}} | }} |
Latest revision as of 07:18, 17 September 2015
Short description: | p4@RIC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RIC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000526104_5end |
EntrezGene: | RIC8A |
HGNC: | 29550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.81e-10 | 250 |
smooth muscle cell | 1.97e-07 | 43 |
smooth muscle myoblast | 1.97e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.43e-07 | 59 |
reproductive system | 1.43e-07 | 59 |
extraembryonic membrane | 2.05e-07 | 14 |
membranous layer | 2.05e-07 | 14 |
primordium | 5.41e-07 | 160 |