FFCP PHASE1:Hg19::chr11:2160680..2160696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=-61bp_to_ENST00000416167_5end | |association_with_transcript=-61bp_to_ENST00000416167_5end | ||
|cluster_id=chr11:2160680..2160696,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_59_at_IGF2_5end | |description=CAGE_peak_59_at_IGF2_5end | ||
|id=chr11:2160680..2160696,- | |id=chr11:2160680..2160696,- | ||
|ontology_enrichment_celltype=CL:0000349!8.93e-07!3;CL:0002577!8.93e-07!3 | |ontology_enrichment_celltype=CL:0000349!8.93e-07!3;CL:0002577!8.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.77e-35;19!CL:0002577;2.23e-21;3!CL:0002536;6.90e-15;2!CL:0002575;5.64e-14;2!CL:0002537;2.51e-13;5!CL:0002541;2.26e-10;3!CL:0000669;2.00e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.00e-35,19;CL:0002577,2.40e-21,3;CL:0002536,6.91e-15,2;CL:0002575,2.70e-14,2;CL:0002537,2.56e-13,5;CL:0002541,2.21e-10,3;CL:0000669,1.39e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.71e-08;1!UBERON:0000358;4.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.88e-18!14;UBERON:0000158!1.88e-18!14;UBERON:0003124!1.66e-13!7;UBERON:0000478!5.11e-11!24;UBERON:0001987!1.68e-08!4;UBERON:0004340!1.68e-08!4;UBERON:0000305!3.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.26e-39;24!UBERON:0005631;1.50e-33;10!UBERON:0000158;1.50e-33;10!UBERON:0001987;6.44e-28;4!UBERON:0000305;6.44e-25;7!UBERON:0003124;2.26e-10;3!UBERON:0000920;2.26e-10;3!UBERON:0002426;4.40e-08;1!UBERON:0003831;4.40e-08;1!UBERON:0003898;4.40e-08;1!UBERON:0004830;4.40e-08;1!UBERON:0003830;4.40e-08;1!UBERON:0005175;4.40e-08;1!UBERON:0001774;4.40e-08;1!UBERON:0001103;4.40e-08;1!UBERON:0007029;7.85e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.00e-58,14;UBERON:0000158,4.00e-58,14;UBERON:0000478,2.35e-39,24;UBERON:0003124,2.87e-35,7;UBERON:0001987,6.92e-28,4;UBERON:0004340,6.92e-28,4;UBERON:0000305,6.61e-25,7;UBERON:0004871,8.90e-22,8;UBERON:0004923,7.37e-13,66;UBERON:0000920,2.21e-10,3;UBERON:0002426,4.11e-08,1;UBERON:0003831,4.11e-08,1;UBERON:0003898,4.11e-08,1;UBERON:0004830,4.11e-08,1;UBERON:0003830,4.11e-08,1;UBERON:0005175,4.11e-08,1;UBERON:0001774,4.11e-08,1;UBERON:0001103,4.11e-08,1;UBERON:0010084,4.11e-08,1;UBERON:0007029,7.59e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.27662058195258,6.33040747748289,0.123766352960047,0,0,0,0,0,0,0.612002073732759,0,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09080345523293,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0.117141414992713,0,0,1.03473071292505,0,0.368738337083406,0,1.95801157462741,1.71571711905428,0,0,0,3.03127571446259,3.32870879020994,8.46692821323105,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.647747748306418,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,1.41215701165169,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0,0.568272293612826,9.5497793895076,5.64232893582013,17.5081600196562,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.922255617552241,0,0,5.74202087517455,0.824378340616761,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,3.26030495937733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.335917362433631,0,0,1.73323001075892,1.31865373409866,1.48287796479207,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,4.08030902748139,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,1.04314963381548,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.365753774946808,0,0,3.4794432940146,1.45713297917742,0,1.19370465096821,0,0,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0.12729431655633,0.404234377916439,0.217716747896961,1.02669990325584,0,0,0,0.651226148887796,0,0,0.898252021065869,2.34640942403454,0.122241444182866,0.813792356631477,0.665756774185513,0,0 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| ||
|short_description=p59@IGF2 | |short_description=p59@IGF2 | ||
}} | }} |
Latest revision as of 08:52, 17 September 2015
Short description: | p59@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_59_at_IGF2_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -61bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.00e-35 | 19 |
placental epithelial cell | 2.40e-21 | 3 |
amniotic epithelial cell | 6.91e-15 | 2 |
central nervous system pericyte | 2.70e-14 | 2 |
amnion mesenchymal stem cell | 2.56e-13 | 5 |
chorionic membrane mesenchymal stem cell | 2.21e-10 | 3 |
pericyte cell | 1.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.00e-58 | 14 |
membranous layer | 4.00e-58 | 14 |
extraembryonic structure | 2.35e-39 | 24 |
chorion | 2.87e-35 | 7 |
placenta | 6.92e-28 | 4 |
allantois | 6.92e-28 | 4 |
amnion | 6.61e-25 | 7 |
somatic layer of lateral plate mesoderm | 8.90e-22 | 8 |
organ component layer | 7.37e-13 | 66 |
egg chorion | 2.21e-10 | 3 |
chest muscle | 4.11e-08 | 1 |
respiratory system muscle | 4.11e-08 | 1 |
skeletal muscle of trunk | 4.11e-08 | 1 |
respiratory system skeletal muscle | 4.11e-08 | 1 |
thoracic segment muscle | 4.11e-08 | 1 |
chest organ | 4.11e-08 | 1 |
muscle of trunk | 4.11e-08 | 1 |
diaphragm | 4.11e-08 | 1 |
future diaphragm | 4.11e-08 | 1 |
surface | 7.59e-08 | 1 |