FFCP PHASE1:Mm9::chr17:88045610..88045632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:88045610..88045632,+ | |||
|description=CAGE_peak_at_chr17:88045610..88045632,+ | |description=CAGE_peak_at_chr17:88045610..88045632,+ | ||
|id=chr17:88045610..88045632,+ | |id=chr17:88045610..88045632,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.96e-09!25;CL:0002563!4.41e-08!9;CL:0002251!4.41e-08!9;CL:0002076!9.49e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.12e-08,3;CL:0000066,1.13e-08,25;CL:0000068,1.42e-08,3;CL:0002202,1.42e-08,3;CL:0000069,1.42e-08,3;CL:0002632,1.42e-08,3;CL:0002368,1.42e-08,3;CL:0000307,1.42e-08,3;CL:0000377,1.42e-08,3;CL:0002076,1.33e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.15e-21!59;UBERON:0000160!6.96e-21!43;UBERON:0000344!4.69e-14!15;UBERON:0001007!1.94e-13!128;UBERON:0001555!1.94e-13!128;UBERON:0007026!1.94e-13!128;UBERON:0004119!6.48e-13!130;UBERON:0000925!6.48e-13!130;UBERON:0006595!6.48e-13!130;UBERON:0004921!4.28e-12!126;UBERON:0004185!4.28e-12!126;UBERON:0001242!5.89e-12!13;UBERON:0000060!5.89e-12!13;UBERON:0001262!5.89e-12!13;UBERON:0004786!5.89e-12!13;UBERON:0000485!4.41e-09!11;UBERON:0003350!4.41e-08!9;UBERON:0004808!4.41e-08!9;UBERON:0001277!4.41e-08!9;UBERON:0004923!8.50e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.76e-31,31;UBERON:0005409,2.24e-23,47;UBERON:0000344,7.65e-17,15;UBERON:0001007,4.80e-14,116;UBERON:0001555,4.80e-14,116;UBERON:0007026,4.80e-14,116;UBERON:0004119,1.05e-13,118;UBERON:0000925,1.05e-13,118;UBERON:0006595,1.05e-13,118;UBERON:0001242,3.19e-12,13;UBERON:0001262,3.19e-12,13;UBERON:0004786,3.19e-12,13;UBERON:0002108,3.51e-12,4;UBERON:0004921,1.00e-11,114;UBERON:0004923,8.72e-10,24;UBERON:0000331,1.52e-09,3;UBERON:0002116,1.52e-09,3;UBERON:0001204,1.52e-09,3;UBERON:0001168,1.52e-09,3;UBERON:0003126,1.42e-08,3;UBERON:0001005,1.42e-08,3;UBERON:0007196,1.42e-08,3;UBERON:0001558,1.42e-08,3;UBERON:0001962,3.73e-07,2;UBERON:0001961,3.73e-07,2;UBERON:0001744,3.73e-07,2 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,1.81478526784098,0.500895729946347,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,9.40578052375397,2.8711598205751,1.29228598847722,3.01659725760245,15.5819203954227,3.02436155711917,4.6563407237614,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,1.94841936910093,1.26679932737549,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,1.0108910337347,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0.232236671860439,0,0.403367049246685,0.22237804384487,1.14135375667535,4.2707615539006,2.47048432086016,2.76468729680296,1.39269530428806,0.974820435595601,2.69645822596266,7.5648317456143,5.57595565112228,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.469380496577004,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0.164140899745061,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,1.09181281873089,0.134864346384821,0.0826534557253359,0,3.36998930558661,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0.503653849092235,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,1.81478526784098,0.500895729946347,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,9.40578052375397,2.8711598205751,1.29228598847722,3.01659725760245,15.5819203954227,3.02436155711917,4.6563407237614,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,1.94841936910093,1.26679932737549,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,1.0108910337347,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0.232236671860439,0,0.403367049246685,0.22237804384487,1.14135375667535,4.2707615539006,2.47048432086016,2.76468729680296,1.39269530428806,0.974820435595601,2.69645822596266,7.5648317456143,5.57595565112228,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.469380496577004,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0.164140899745061,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,1.09181281873089,0.134864346384821,0.0826534557253359,0,3.36998930558661,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0.503653849092235,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr17:88045610..88045632,+ | |short_description=p@chr17:88045610..88045632,+ | ||
}} | }} |
Latest revision as of 11:34, 5 August 2015
Short description: | p@chr17:88045610..88045632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88045610..88045632, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.12e-08 | 3 |
epithelial cell | 1.13e-08 | 25 |
duct epithelial cell | 1.42e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.42e-08 | 3 |
branched duct epithelial cell | 1.42e-08 | 3 |
epithelial cell of lower respiratory tract | 1.42e-08 | 3 |
respiratory epithelial cell | 1.42e-08 | 3 |
tracheal epithelial cell | 1.42e-08 | 3 |
tracheoblast | 1.42e-08 | 3 |
endo-epithelial cell | 1.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.76e-31 | 31 |
gastrointestinal system | 2.24e-23 | 47 |
mucosa | 7.65e-17 | 15 |
digestive system | 4.80e-14 | 116 |
digestive tract | 4.80e-14 | 116 |
primitive gut | 4.80e-14 | 116 |
endoderm-derived structure | 1.05e-13 | 118 |
endoderm | 1.05e-13 | 118 |
presumptive endoderm | 1.05e-13 | 118 |
intestinal mucosa | 3.19e-12 | 13 |
wall of intestine | 3.19e-12 | 13 |
gastrointestinal system mucosa | 3.19e-12 | 13 |
small intestine | 3.51e-12 | 4 |
subdivision of digestive tract | 1.00e-11 | 114 |
organ component layer | 8.72e-10 | 24 |
ileal mucosa | 1.52e-09 | 3 |
ileum | 1.52e-09 | 3 |
mucosa of small intestine | 1.52e-09 | 3 |
wall of small intestine | 1.52e-09 | 3 |
trachea | 1.42e-08 | 3 |
respiratory airway | 1.42e-08 | 3 |
tracheobronchial tree | 1.42e-08 | 3 |
lower respiratory tract | 1.42e-08 | 3 |
gut-associated lymphoid tissue | 3.73e-07 | 2 |
mucosa-associated lymphoid tissue | 3.73e-07 | 2 |
lymphoid tissue | 3.73e-07 | 2 |