FFCP PHASE1:Mm9::chr14:19103467..19103505,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100043670,100043805,634785,66480 | |EntrezGene=100043670,100043805,634785,66480 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2534 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZM2,Q5M8Q0 | |UniProt=Q9CZM2,Q5M8Q0 | ||
|association_with_transcript=0bp_to_ENSMUST00000100799,NM_025586,uc007shr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000100799,NM_025586,uc007shr.1_5end | ||
|cluster_id=chr14:19103467..19103505,- | |||
|description=CAGE_peak_1_at_Gm10224_5end,CAGE_peak_1_at_Gm4581_5end,CAGE_peak_1_at_LOC634785_5end,CAGE_peak_1_at_Rpl15_5end | |description=CAGE_peak_1_at_Gm10224_5end,CAGE_peak_1_at_Gm4581_5end,CAGE_peak_1_at_LOC634785_5end,CAGE_peak_1_at_Rpl15_5end | ||
|id=chr14:19103467..19103505,- | |id=chr14:19103467..19103505,- | ||
|ontology_enrichment_celltype=CL:0000063!3.06e-11!66;CL:0002320!2.40e-08!46;CL:0000134!2.40e-08!46;CL:0000144!5.02e-08!121;CL:0000012!5.02e-08!121;CL:0000548!7.03e-08!115;CL:0000004!7.03e-08!115;CL:0000255!7.03e-08!115;CL:0000219!9.91e-08!54;CL:0002371!2.94e-07!118;CL:0000988!7.00e-07!32;CL:0002032!7.00e-07!32;CL:0000037!7.00e-07!32;CL:0000566!7.00e-07!32;CL:0000837!7.00e-07!32 | |ontology_enrichment_celltype=CL:0000063!3.06e-11!66;CL:0002320!2.40e-08!46;CL:0000134!2.40e-08!46;CL:0000144!5.02e-08!121;CL:0000012!5.02e-08!121;CL:0000548!7.03e-08!115;CL:0000004!7.03e-08!115;CL:0000255!7.03e-08!115;CL:0000219!9.91e-08!54;CL:0002371!2.94e-07!118;CL:0000988!7.00e-07!32;CL:0002032!7.00e-07!32;CL:0000037!7.00e-07!32;CL:0000566!7.00e-07!32;CL:0000837!7.00e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.40e-08,46;CL:0000134,2.40e-08,46;CL:0000219,9.91e-08,54;CL:0000988,7.00e-07,32;CL:0002032,7.00e-07,32;CL:0000037,7.00e-07,32;CL:0000837,7.00e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.40e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.40e-08,46 | |||
|phase1_expression=31.06887633833,30.7098358722638,30.0299497997094,10.5862473957391,14.5259761684441,43.6486106970913,36.9107972140931,63.2704284863724,90.1047821770667,127.565166845486,85.095330208076,113.356237932373,34.924948905966,53.6761270852644,32.9778664197506,26.9292105628469,23.785103856357,22.8710069884722,21.8011949433125,25.4633791078818,20.2403030559546,43.6880185283895,39.1799683708403,39.0381511615912,41.2936705920906,44.2158612368566,52.122201535248,46.541786260152,38.1947073107312,37.8045194639896,71.3972244310081,40.0069324279568,26.4477858661365,0,62.9696531057779,64.9977463351705,57.3715891097257,17.996860121687,22.6587249911902,16.2292360631877,7.64700934440319,9.56263678941824,11.1667381197165,46.455925832988,44.0989650804888,71.5832333430558,39.119567217402,25.0728929837513,19.7717564461025,15.1655321277941,23.7976916763116,15.8127820801469,32.5498255752009,31.1905721064878,35.6259427091012,47.5929956666502,38.9685478316709,31.455997628924,30.3474691289397,27.5075309221457,19.6487735086916,58.2812595158907,41.7968554172235,40.9454371363037,43.5101199529469,44.0497671266582,33.2556122675429,41.1113586694063,25.0928861786516,29.8363123713036,27.9732198597338,28.8507494247842,21.8659855542097,22.9057794531964,25.1115134067779,20.2228133054205,7.70811166995721,13.7902325132003,8.60196586234964,21.101806036831,26.0739784266868,29.1711487511786,22.3346399201105,15.1945904708554,10.8486755921535,17.0884579574727,20.0744069926735,28.1463163196204,52.1753472065638,35.1407754496553,27.2472619379577,22.371020801516,32.638624017972,15.1116893658589,15.5946340187441,5.37632264516803,22.7519960613438,92.7140954824634,122.618994172554,108.828588949185,29.2954313135495,42.3477375467249,2.54805239706646,0,58.4525810730278,63.8466860997248,52.5745422815375,19.068707913083,11.9111426477699,14.398887489288,45.2796702859615,25.879565656532,33.4392471021285,34.3647620459979,21.4011446986983,19.729654838759,19.5284024510155,9.54355755671417,16.8076004870476,24.2650274921114,17.8881629952919,16.4857586065976,16.775258509631,8.49064311333487,9.42510180660548,23.5020490791904,36.6634280988116,70.1886195262287,48.6678969689838,10.3355541189328,10.0650132620098,21.1099311549612,11.6462294528825,15.0872119824895,9.76603809429932,9.73447578406546,26.7837526926332,16.1729061793121,27.7995034277042,8.41767423545896,31.8795085258624,34.7152177694544,23.7682011343061,25.1677045785644,17.8935992767992,15.8861013153214,19.4899587084236,13.4525752784288,43.760302565367,27.231275544166,28.6800332387237,37.0440787802601,30.5851974148158,24.0293994900295,28.6037169607041,38.8116820296062,57.5814813596853,45.8079274664193,47.7394678984596,28.7904823824348,27.9086011377504,27.7295574649963,23.674473558521,26.5631712858995,22.6772655944446,21.3931229170375,23.3397859217669,17.9818627245441,24.0257380873681,17.8942535846214,12.8088719082452,13.8889988054066,17.344459107993,12.0785776884335,8.83217783969334,14.9211687949962,8.59088835757875,18.5115396664481,35.6191378393841,29.0295839825548,29.1240462587931,20.3700359869576,20.4587800337281,21.8759470029443,22.302865892592,18.1168850196412,17.0907941984183,18.3039954277859,19.8863368861503,16.178749355776,16.8587678902262,19.3167035056736,68.6597801450156,36.7880210603327,16.9061603509621,27.6965805869627,27.5412531778029,23.0746847439148,13.9120381673366,13.1373031701846,12.0889020437859,14.3140710149289,16.3048944897932,33.702711354651,36.3634140959426,35.7530758691917,31.6461789366065,28.94125917029,29.0273471030819,27.331133057827,26.1037715107807,38.1640364331433,11.5014565221884,25.3055844414582,24.0269008298212,17.1753637004036,23.8598559984143,16.8855232477179,14.4107488329952,55.7104750605225,38.2967694638761,38.5321344709677,37.7851299744488,29.1460887948759,25.4706695748035,17.7571619550597,17.0245955634686,15.723992965063,14.6698387164888,16.7140581010053,16.4050732772601,13.3077133894991,16.5870412333199,21.7562273527484,23.1129208318947,27.5936746304732,12.2018448390722,10.6662634798905,72.9510506926206,11.6136626514012,26.1871822115493,21.4741309363151,17.6647186140895,20.5513166239195,21.6114713859922,17.8338214396964,20.2405350837447,16.3663280430335,20.5549644532192,9.3183181762324,20.0135520143659,36.5034487517873,26.3876874152793,19.3015043877867,26.5490276679926,50.2555916840812,69.5344181018927,51.6777918531161,47.8389066466852,35.0476068656077,28.9439688348408,38.8981090540931,36.7192299736263,39.8206314999128,42.1674434299995,43.3169281642385,16.6815406819356,37.4527075585125,38.9369638186091,33.4365774649284,25.0049729435606,31.0361742627603,21.72047071948,30.4464949114599,38.0168167063211,24.784352291067,18.0833286405069,18.4672603294458,24.0581995776899,27.8042583918798,27.9331284967339,32.171616350032,22.1525435838687,13.7214723487777,22.2132145037208,33.2282857420788,28.890346269675,32.9644799758209,25.2884321283897,30.198718863261,38.0751683186236,37.5069892227403,39.1105925866519,21.9574242143476,45.3942150788929,33.3443926088032,32.4016022465404,31.9905092902137,27.7320455957646,26.1636831986552,24.7133832618754,30.8872011541155,15.035336901848,13.6694648879124,15.2197093444731,34.6878386822031,43.1846660093025,28.7787758749191,33.0649148102992,34.8049618511003,29.6913813773758,26.9523076626977,18.2455259300737,15.7029678536904,8.92893019399383,17.696622755178,48.6540516696394,43.6521567950516,46.7714962720062,32.4038319158141,33.1797862484712,28.9671033343125,32.1963169240578,27.6648072857924,26.7485891359049,27.4247223572206,21.635649524225,26.5544682927309,20.1028271752299,20.6324649089842,28.8581739386284,48.2660548558979,36.5988463673691,18.7393906211225,28.903101219482,23.9928627790117,39.2294133714691,22.5707446815914,10.1655331671072,10.5874804396651,9.73922372846974,8.07709957015332,6.85082519770642,9.06472676867641,11.4753825039407,10.3573876741571,9.9691329976525,14.497288729051,35.3914855262042,34.3161391124887,35.683323602614,21.1502843849416,27.6689374668937,21.5096904886517,22.0024260523599,23.4879965252339,22.1434254618353,20.2157769411038,22.8131369901216,16.9763707247469,19.4774335537355,22.2167278844896,22.9741875822453,20.9569224164552,18.6573764771217,22.1845603533261,22.2526386433786,18.8414617772029,22.286501405052,16.8602015851371,18.1211504359964,17.1508771626148,18.9159854634815,20.0536620703273,17.5610853957862,21.834786049341,24.8521528337927,14.5896990631012,17.3207126461294,20.3904278517416,15.5507796404482,19.3671051482457,21.9913536518501,25.4806789496705,18.4805970671873,19.9830080264917,21.2330048596416,21.838550492832,20.4043695345971 | |phase1_expression=31.06887633833,30.7098358722638,30.0299497997094,10.5862473957391,14.5259761684441,43.6486106970913,36.9107972140931,63.2704284863724,90.1047821770667,127.565166845486,85.095330208076,113.356237932373,34.924948905966,53.6761270852644,32.9778664197506,26.9292105628469,23.785103856357,22.8710069884722,21.8011949433125,25.4633791078818,20.2403030559546,43.6880185283895,39.1799683708403,39.0381511615912,41.2936705920906,44.2158612368566,52.122201535248,46.541786260152,38.1947073107312,37.8045194639896,71.3972244310081,40.0069324279568,26.4477858661365,0,62.9696531057779,64.9977463351705,57.3715891097257,17.996860121687,22.6587249911902,16.2292360631877,7.64700934440319,9.56263678941824,11.1667381197165,46.455925832988,44.0989650804888,71.5832333430558,39.119567217402,25.0728929837513,19.7717564461025,15.1655321277941,23.7976916763116,15.8127820801469,32.5498255752009,31.1905721064878,35.6259427091012,47.5929956666502,38.9685478316709,31.455997628924,30.3474691289397,27.5075309221457,19.6487735086916,58.2812595158907,41.7968554172235,40.9454371363037,43.5101199529469,44.0497671266582,33.2556122675429,41.1113586694063,25.0928861786516,29.8363123713036,27.9732198597338,28.8507494247842,21.8659855542097,22.9057794531964,25.1115134067779,20.2228133054205,7.70811166995721,13.7902325132003,8.60196586234964,21.101806036831,26.0739784266868,29.1711487511786,22.3346399201105,15.1945904708554,10.8486755921535,17.0884579574727,20.0744069926735,28.1463163196204,52.1753472065638,35.1407754496553,27.2472619379577,22.371020801516,32.638624017972,15.1116893658589,15.5946340187441,5.37632264516803,22.7519960613438,92.7140954824634,122.618994172554,108.828588949185,29.2954313135495,42.3477375467249,2.54805239706646,0,58.4525810730278,63.8466860997248,52.5745422815375,19.068707913083,11.9111426477699,14.398887489288,45.2796702859615,25.879565656532,33.4392471021285,34.3647620459979,21.4011446986983,19.729654838759,19.5284024510155,9.54355755671417,16.8076004870476,24.2650274921114,17.8881629952919,16.4857586065976,16.775258509631,8.49064311333487,9.42510180660548,23.5020490791904,36.6634280988116,70.1886195262287,48.6678969689838,10.3355541189328,10.0650132620098,21.1099311549612,11.6462294528825,15.0872119824895,9.76603809429932,9.73447578406546,26.7837526926332,16.1729061793121,27.7995034277042,8.41767423545896,31.8795085258624,34.7152177694544,23.7682011343061,25.1677045785644,17.8935992767992,15.8861013153214,19.4899587084236,13.4525752784288,43.760302565367,27.231275544166,28.6800332387237,37.0440787802601,30.5851974148158,24.0293994900295,28.6037169607041,38.8116820296062,57.5814813596853,45.8079274664193,47.7394678984596,28.7904823824348,27.9086011377504,27.7295574649963,23.674473558521,26.5631712858995,22.6772655944446,21.3931229170375,23.3397859217669,17.9818627245441,24.0257380873681,17.8942535846214,12.8088719082452,13.8889988054066,17.344459107993,12.0785776884335,8.83217783969334,14.9211687949962,8.59088835757875,18.5115396664481,35.6191378393841,29.0295839825548,29.1240462587931,20.3700359869576,20.4587800337281,21.8759470029443,22.302865892592,18.1168850196412,17.0907941984183,18.3039954277859,19.8863368861503,16.178749355776,16.8587678902262,19.3167035056736,68.6597801450156,36.7880210603327,16.9061603509621,27.6965805869627,27.5412531778029,23.0746847439148,13.9120381673366,13.1373031701846,12.0889020437859,14.3140710149289,16.3048944897932,33.702711354651,36.3634140959426,35.7530758691917,31.6461789366065,28.94125917029,29.0273471030819,27.331133057827,26.1037715107807,38.1640364331433,11.5014565221884,25.3055844414582,24.0269008298212,17.1753637004036,23.8598559984143,16.8855232477179,14.4107488329952,55.7104750605225,38.2967694638761,38.5321344709677,37.7851299744488,29.1460887948759,25.4706695748035,17.7571619550597,17.0245955634686,15.723992965063,14.6698387164888,16.7140581010053,16.4050732772601,13.3077133894991,16.5870412333199,21.7562273527484,23.1129208318947,27.5936746304732,12.2018448390722,10.6662634798905,72.9510506926206,11.6136626514012,26.1871822115493,21.4741309363151,17.6647186140895,20.5513166239195,21.6114713859922,17.8338214396964,20.2405350837447,16.3663280430335,20.5549644532192,9.3183181762324,20.0135520143659,36.5034487517873,26.3876874152793,19.3015043877867,26.5490276679926,50.2555916840812,69.5344181018927,51.6777918531161,47.8389066466852,35.0476068656077,28.9439688348408,38.8981090540931,36.7192299736263,39.8206314999128,42.1674434299995,43.3169281642385,16.6815406819356,37.4527075585125,38.9369638186091,33.4365774649284,25.0049729435606,31.0361742627603,21.72047071948,30.4464949114599,38.0168167063211,24.784352291067,18.0833286405069,18.4672603294458,24.0581995776899,27.8042583918798,27.9331284967339,32.171616350032,22.1525435838687,13.7214723487777,22.2132145037208,33.2282857420788,28.890346269675,32.9644799758209,25.2884321283897,30.198718863261,38.0751683186236,37.5069892227403,39.1105925866519,21.9574242143476,45.3942150788929,33.3443926088032,32.4016022465404,31.9905092902137,27.7320455957646,26.1636831986552,24.7133832618754,30.8872011541155,15.035336901848,13.6694648879124,15.2197093444731,34.6878386822031,43.1846660093025,28.7787758749191,33.0649148102992,34.8049618511003,29.6913813773758,26.9523076626977,18.2455259300737,15.7029678536904,8.92893019399383,17.696622755178,48.6540516696394,43.6521567950516,46.7714962720062,32.4038319158141,33.1797862484712,28.9671033343125,32.1963169240578,27.6648072857924,26.7485891359049,27.4247223572206,21.635649524225,26.5544682927309,20.1028271752299,20.6324649089842,28.8581739386284,48.2660548558979,36.5988463673691,18.7393906211225,28.903101219482,23.9928627790117,39.2294133714691,22.5707446815914,10.1655331671072,10.5874804396651,9.73922372846974,8.07709957015332,6.85082519770642,9.06472676867641,11.4753825039407,10.3573876741571,9.9691329976525,14.497288729051,35.3914855262042,34.3161391124887,35.683323602614,21.1502843849416,27.6689374668937,21.5096904886517,22.0024260523599,23.4879965252339,22.1434254618353,20.2157769411038,22.8131369901216,16.9763707247469,19.4774335537355,22.2167278844896,22.9741875822453,20.9569224164552,18.6573764771217,22.1845603533261,22.2526386433786,18.8414617772029,22.286501405052,16.8602015851371,18.1211504359964,17.1508771626148,18.9159854634815,20.0536620703273,17.5610853957862,21.834786049341,24.8521528337927,14.5896990631012,17.3207126461294,20.3904278517416,15.5507796404482,19.3671051482457,21.9913536518501,25.4806789496705,18.4805970671873,19.9830080264917,21.2330048596416,21.838550492832,20.4043695345971 | ||
|short_description=p1@Gm10224,p1@Gm4581,p1@LOC634785,p1@Rpl15 | |short_description=p1@Gm10224,p1@Gm4581,p1@LOC634785,p1@Rpl15 | ||
}} | }} |
Latest revision as of 18:10, 25 September 2015
Short description: | p1@Gm10224, p1@Gm4581, p1@LOC634785, p1@Rpl15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10224_5end, CAGE_peak_1_at_Gm4581_5end, CAGE_peak_1_at_LOC634785_5end, CAGE_peak_1_at_Rpl15_5end |
Coexpression cluster: | MCL_coexpression_mm9:2534 |
Association with transcript: | 0bp_to_ENSMUST00000100799, NM_025586, uc007shr.1_5end |
EntrezGene: | 100043670,100043805,634785,66480 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.40e-08 | 46 |
mesenchymal cell | 2.40e-08 | 46 |
motile cell | 9.91e-08 | 54 |
hematopoietic cell | 7.00e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.00e-07 | 32 |
hematopoietic stem cell | 7.00e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.00e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.40e-08 | 46 |