FFCP PHASE1:Mm9::chr15:78603854..78603865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17305 | |EntrezGene=17305 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O09008,Q3UPI0 | |UniProt=O09008,Q3UPI0 | ||
|association_with_transcript=9bp_to_NM_008595,uc007wri.1_5end | |association_with_transcript=9bp_to_NM_008595,uc007wri.1_5end | ||
|cluster_id=chr15:78603854..78603865,- | |||
|description=CAGE_peak_3_at_Mfng_5end | |description=CAGE_peak_3_at_Mfng_5end | ||
|id=chr15:78603854..78603865,- | |id=chr15:78603854..78603865,- | ||
|ontology_enrichment_celltype=CL:0000107!3.46e-07!9;CL:0000540!4.33e-07!33;CL:0000047!4.33e-07!33;CL:0000031!4.33e-07!33;CL:0000404!4.33e-07!33 | |ontology_enrichment_celltype=CL:0000107!3.46e-07!9;CL:0000540!4.33e-07!33;CL:0000047!4.33e-07!33;CL:0000031!4.33e-07!33;CL:0000404!4.33e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.10e-14,9;CL:0000540,8.65e-09,33;CL:0000047,8.65e-09,33;CL:0000031,8.65e-09,33;CL:0000404,8.65e-09,33;CL:0000034,5.02e-08,97;CL:0000624,1.16e-07,8;CL:0000084,3.96e-07,11;CL:0000827,3.96e-07,11;CL:0000393,6.42e-07,39;CL:0000211,6.42e-07,39;CL:0000221,9.53e-07,44;CL:0000133,9.53e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.46e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.10e-14,9;UBERON:0005085,1.63e-12,13;UBERON:0000020,2.55e-11,12;UBERON:0001032,2.55e-11,12;UBERON:0004456,2.55e-11,12;UBERON:0000010,4.27e-11,11;UBERON:0000033,2.64e-10,13;UBERON:0004121,6.01e-10,95;UBERON:0000924,6.01e-10,95;UBERON:0006601,6.01e-10,95;UBERON:0000970,2.59e-09,9;UBERON:0000019,2.59e-09,9;UBERON:0000047,2.59e-09,9;UBERON:0010312,2.59e-09,9;UBERON:0004088,2.59e-09,9;UBERON:0002104,2.59e-09,9;UBERON:0001456,2.59e-09,9;UBERON:0003072,2.59e-09,9;UBERON:0004128,2.59e-09,9;UBERON:0003071,2.59e-09,9;UBERON:0010371,5.00e-09,73;UBERON:0003056,5.39e-08,49;UBERON:0002346,6.17e-08,64;UBERON:0003075,6.17e-08,64;UBERON:0007284,6.17e-08,64;UBERON:0000007,6.83e-08,8;UBERON:0003296,6.83e-08,8;UBERON:0010133,6.83e-08,8;UBERON:0001444,2.05e-07,11;UBERON:0010313,4.43e-07,3;UBERON:0002342,4.43e-07,3;UBERON:0002005,4.43e-07,3;UBERON:0005428,4.43e-07,3;UBERON:0005062,4.43e-07,3;UBERON:0000013,5.08e-07,3;UBERON:0007811,5.77e-07,36 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,1.16210991097419,2.25261955442667,2.34064526321993,0.856089841127525,0.478632953972018,2.22560948910567,1.22388563386596,0.666219523631325,0.202475267389826,0,1.10411757875383,0.685572168028694,0.42438965179803,0.255129870453209,1.29078236561151,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.59224030771194,1.62007125998029,0.841299845405528,0.285650984403804,0,2.32732518508413,3.06705507258356,0.919218786610021,0,0,0.153606533256243,0.791317726381163,0.731901148819277,1.04182674111352,0.837548997004143,0,0,0,0.284743361598206,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.445326417194474,1.38788261412909,0.913396434936424,0.461230994512117,0,0.23517741427141,0.251333182659351,0.247194967734374,0.578397427679647,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0.292780797011547,0,0.255457055208591,2.39630249011841,1.19980546198682,0.889491589511453,0,0,0.502617408451458,0,0,0,0,0.101839363850316,0.373220911830279,0,0,1.17108398666433,2.29902104433473,1.62055916824814,1.05493372485001,2.31324097114515,3.33095672740609,2.62364828767241,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.853153002140936,1.16118335930219,0.77320476793256,0.201683524623343,0.22237804384487,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0,0,0.241177159752417,0,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.977789858652155,0.848725428875941,0.469380496577004,0.502518772325447,0.714130922658041,0,1.10344600874334,0.664394068946325,0.797273843287435,0.491589944147214,1.20879487306127,1.44649058581512,0,0.54390568381871,0,1.10374698521893,0,0,0,0,3.47059041357882,2.34263246577983,4.30846795465598,0.955875191810208,1.78238939265915,3.67999490025482,3.23848561339915,2.33804686329049,4.74345333535828,0,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.900305470156551,1.68166288917581,2.14337035031592,3.90148514013002,1.24858172321449,1.31639216481697,1.8267896946876,0,0,0.220528398054962,0.49465875882444,0,0.482503399425247,0.358117032009409,0,0.291480836629851,0.18542530201051,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,9.5187920796559,8.81694149639045,7.60099855924331,0,0.632671987162271,1.01659733563424,0.324016022465404,0,0,0.134864346384821,0.330613822901344,0,0,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0,0.104859344425711,0,0,0,0.608175645870493,0.616265742988964,0.649604114888975,1.07416017400489,0.993406773906324,0.360586348559907,0.443068581523732,0.302899349844443,0.457240839929999,0.504130925684203,0.779663045918019,0.384847366561318,0.467507608726276,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.682934423016537,0.972426868273176,0.628839487883947,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.384150914429216,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | |phase1_expression=3.52327463630547,0,0,0,0,0,0,1.16210991097419,2.25261955442667,2.34064526321993,0.856089841127525,0.478632953972018,2.22560948910567,1.22388563386596,0.666219523631325,0.202475267389826,0,1.10411757875383,0.685572168028694,0.42438965179803,0.255129870453209,1.29078236561151,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.59224030771194,1.62007125998029,0.841299845405528,0.285650984403804,0,2.32732518508413,3.06705507258356,0.919218786610021,0,0,0.153606533256243,0.791317726381163,0.731901148819277,1.04182674111352,0.837548997004143,0,0,0,0.284743361598206,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.445326417194474,1.38788261412909,0.913396434936424,0.461230994512117,0,0.23517741427141,0.251333182659351,0.247194967734374,0.578397427679647,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0.292780797011547,0,0.255457055208591,2.39630249011841,1.19980546198682,0.889491589511453,0,0,0.502617408451458,0,0,0,0,0.101839363850316,0.373220911830279,0,0,1.17108398666433,2.29902104433473,1.62055916824814,1.05493372485001,2.31324097114515,3.33095672740609,2.62364828767241,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.853153002140936,1.16118335930219,0.77320476793256,0.201683524623343,0.22237804384487,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0,0,0.241177159752417,0,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.977789858652155,0.848725428875941,0.469380496577004,0.502518772325447,0.714130922658041,0,1.10344600874334,0.664394068946325,0.797273843287435,0.491589944147214,1.20879487306127,1.44649058581512,0,0.54390568381871,0,1.10374698521893,0,0,0,0,3.47059041357882,2.34263246577983,4.30846795465598,0.955875191810208,1.78238939265915,3.67999490025482,3.23848561339915,2.33804686329049,4.74345333535828,0,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.900305470156551,1.68166288917581,2.14337035031592,3.90148514013002,1.24858172321449,1.31639216481697,1.8267896946876,0,0,0.220528398054962,0.49465875882444,0,0.482503399425247,0.358117032009409,0,0.291480836629851,0.18542530201051,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,9.5187920796559,8.81694149639045,7.60099855924331,0,0.632671987162271,1.01659733563424,0.324016022465404,0,0,0.134864346384821,0.330613822901344,0,0,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0,0.104859344425711,0,0,0,0.608175645870493,0.616265742988964,0.649604114888975,1.07416017400489,0.993406773906324,0.360586348559907,0.443068581523732,0.302899349844443,0.457240839929999,0.504130925684203,0.779663045918019,0.384847366561318,0.467507608726276,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.682934423016537,0.972426868273176,0.628839487883947,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.384150914429216,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Mfng | |short_description=p3@Mfng | ||
}} | }} |
Latest revision as of 02:23, 27 September 2015
Short description: | p3@Mfng |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mfng_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_008595, uc007wri.1_5end |
EntrezGene: | Mfng |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.10e-14 | 9 |
neuron | 8.65e-09 | 33 |
neuronal stem cell | 8.65e-09 | 33 |
neuroblast | 8.65e-09 | 33 |
electrically signaling cell | 8.65e-09 | 33 |
stem cell | 5.02e-08 | 97 |
CD4-positive, alpha-beta T cell | 1.16e-07 | 8 |
T cell | 3.96e-07 | 11 |
pro-T cell | 3.96e-07 | 11 |
electrically responsive cell | 6.42e-07 | 39 |
electrically active cell | 6.42e-07 | 39 |
ectodermal cell | 9.53e-07 | 44 |
neurectodermal cell | 9.53e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 6.10e-14 | 9 |
ectodermal placode | 1.63e-12 | 13 |
sense organ | 2.55e-11 | 12 |
sensory system | 2.55e-11 | 12 |
entire sense organ system | 2.55e-11 | 12 |
peripheral nervous system | 4.27e-11 | 11 |
head | 2.64e-10 | 13 |
ectoderm-derived structure | 6.01e-10 | 95 |
ectoderm | 6.01e-10 | 95 |
presumptive ectoderm | 6.01e-10 | 95 |
eye | 2.59e-09 | 9 |
camera-type eye | 2.59e-09 | 9 |
simple eye | 2.59e-09 | 9 |
immature eye | 2.59e-09 | 9 |
ocular region | 2.59e-09 | 9 |
visual system | 2.59e-09 | 9 |
face | 2.59e-09 | 9 |
optic cup | 2.59e-09 | 9 |
optic vesicle | 2.59e-09 | 9 |
eye primordium | 2.59e-09 | 9 |
ecto-epithelium | 5.00e-09 | 73 |
pre-chordal neural plate | 5.39e-08 | 49 |
neurectoderm | 6.17e-08 | 64 |
neural plate | 6.17e-08 | 64 |
presumptive neural plate | 6.17e-08 | 64 |
pituitary gland | 6.83e-08 | 8 |
gland of diencephalon | 6.83e-08 | 8 |
neuroendocrine gland | 6.83e-08 | 8 |
subdivision of head | 2.05e-07 | 11 |
neural crest-derived structure | 4.43e-07 | 3 |
neural crest | 4.43e-07 | 3 |
enteric nervous system | 4.43e-07 | 3 |
vagal neural crest | 4.43e-07 | 3 |
neural fold | 4.43e-07 | 3 |
sympathetic nervous system | 5.08e-07 | 3 |
craniocervical region | 5.77e-07 | 36 |