FFCP PHASE1:Mm9::chr1:132741268..132741278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:132741268..132741278,+ | |||
|description=CAGE_peak_at_chr1:132741268..132741278,+ | |description=CAGE_peak_at_chr1:132741268..132741278,+ | ||
|id=chr1:132741268..132741278,+ | |id=chr1:132741268..132741278,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.04e-19!25;CL:0002563!6.35e-16!9;CL:0002251!6.35e-16!9;CL:0000223!4.02e-15!20;CL:0000239!7.98e-10!6;CL:0000677!7.98e-10!6;CL:0000212!7.98e-10!6;CL:0000584!7.98e-10!6;CL:0002076!5.14e-09!15;CL:0000075!2.26e-08!7;CL:0000181!2.73e-08!5;CL:0000417!2.73e-08!5;CL:0000668!2.73e-08!5;CL:0000412!2.73e-08!5;CL:0000182!2.73e-08!5;CL:0000473!4.43e-08!3;CL:0000627!4.43e-08!3;CL:0000682!4.43e-08!3;CL:0002250!8.10e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.50e-13,25;CL:0000223,1.73e-10,20;CL:0000182,7.84e-09,5;CL:0002563,2.71e-08,9;CL:0002251,2.71e-08,9;CL:0000239,2.63e-07,6;CL:0000677,2.63e-07,6;CL:0000584,2.63e-07,6;CL:0000682,5.92e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-25!15;UBERON:0001242!2.54e-21!13;UBERON:0000060!2.54e-21!13;UBERON:0001262!2.54e-21!13;UBERON:0004786!2.54e-21!13;UBERON:0000160!5.54e-17!43;UBERON:0003350!6.35e-16!9;UBERON:0004808!6.35e-16!9;UBERON:0001277!6.35e-16!9;UBERON:0004923!6.99e-15!24;UBERON:0000485!8.79e-13!11;UBERON:0005409!1.66e-12!59;UBERON:0001007!3.70e-09!128;UBERON:0001555!3.70e-09!128;UBERON:0007026!3.70e-09!128;UBERON:0004119!6.40e-09!130;UBERON:0000925!6.40e-09!130;UBERON:0006595!6.40e-09!130;UBERON:0004921!1.36e-07!126;UBERON:0004185!1.36e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.75e-24,31;UBERON:0000344,3.37e-19,15;UBERON:0001242,3.13e-17,13;UBERON:0001262,3.13e-17,13;UBERON:0004786,3.13e-17,13;UBERON:0005409,3.49e-15,47;UBERON:0004923,1.22e-11,24;UBERON:0001155,5.96e-11,2;UBERON:0000059,5.96e-11,2;UBERON:0001007,2.64e-09,116;UBERON:0001555,2.64e-09,116;UBERON:0007026,2.64e-09,116;UBERON:0004119,4.21e-09,118;UBERON:0000925,4.21e-09,118;UBERON:0006595,4.21e-09,118;UBERON:0003350,2.71e-08,9;UBERON:0004808,2.71e-08,9;UBERON:0001277,2.71e-08,9;UBERON:0004921,3.11e-08,114;UBERON:0000331,1.05e-07,3;UBERON:0002116,1.05e-07,3;UBERON:0001204,1.05e-07,3;UBERON:0001168,1.05e-07,3;UBERON:0000485,8.23e-07,11 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.27993938234725,0.91763712426868,1.14846392823004,1.29228598847722,0.861884930743556,5.51067916423484,2.26827116783938,0,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0,0,0,0.58489226135736,0,1.72910439899755,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.27993938234725,0.91763712426868,1.14846392823004,1.29228598847722,0.861884930743556,5.51067916423484,2.26827116783938,0,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0,0,0,0.58489226135736,0,1.72910439899755,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:132741268..132741278,+ | |short_description=p@chr1:132741268..132741278,+ | ||
}} | }} |
Latest revision as of 17:51, 4 August 2015
Short description: | p@chr1:132741268..132741278, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132741268..132741278, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.50e-13 | 25 |
endodermal cell | 1.73e-10 | 20 |
hepatocyte | 7.84e-09 | 5 |
intestinal epithelial cell | 2.71e-08 | 9 |
epithelial cell of alimentary canal | 2.71e-08 | 9 |
brush border epithelial cell | 2.63e-07 | 6 |
gut absorptive cell | 2.63e-07 | 6 |
enterocyte | 2.63e-07 | 6 |
M cell of gut | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.75e-24 | 31 |
mucosa | 3.37e-19 | 15 |
intestinal mucosa | 3.13e-17 | 13 |
wall of intestine | 3.13e-17 | 13 |
gastrointestinal system mucosa | 3.13e-17 | 13 |
gastrointestinal system | 3.49e-15 | 47 |
organ component layer | 1.22e-11 | 24 |
colon | 5.96e-11 | 2 |
large intestine | 5.96e-11 | 2 |
digestive system | 2.64e-09 | 116 |
digestive tract | 2.64e-09 | 116 |
primitive gut | 2.64e-09 | 116 |
endoderm-derived structure | 4.21e-09 | 118 |
endoderm | 4.21e-09 | 118 |
presumptive endoderm | 4.21e-09 | 118 |
epithelium of mucosa | 2.71e-08 | 9 |
gastrointestinal system epithelium | 2.71e-08 | 9 |
intestinal epithelium | 2.71e-08 | 9 |
subdivision of digestive tract | 3.11e-08 | 114 |
ileal mucosa | 1.05e-07 | 3 |
ileum | 1.05e-07 | 3 |
mucosa of small intestine | 1.05e-07 | 3 |
wall of small intestine | 1.05e-07 | 3 |
simple columnar epithelium | 8.23e-07 | 11 |