Personal tools

FFCP PHASE1:Mm9::chr16:32079210..32079245,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=224105
|EntrezGene=224105
|HGNC=
|HGNC=
|MCL_coexpression_id=1960
|TSSclassifier=NA
|UniProt=Q8CIN4,B1GX80
|UniProt=Q8CIN4,B1GX80
|association_with_transcript=113bp_to_NM_177326,uc007yyd.1_5end
|association_with_transcript=113bp_to_NM_177326,uc007yyd.1_5end
|cluster_id=chr16:32079210..32079245,-
|description=CAGE_peak_2_at_Pak2_5end
|description=CAGE_peak_2_at_Pak2_5end
|id=chr16:32079210..32079245,-
|id=chr16:32079210..32079245,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!9.38e-14!59;UBERON:0004119!3.60e-10!130;UBERON:0000925!3.60e-10!130;UBERON:0006595!3.60e-10!130;UBERON:0000160!4.09e-10!43;UBERON:0001007!2.64e-09!128;UBERON:0001555!2.64e-09!128;UBERON:0007026!2.64e-09!128;UBERON:0004923!7.61e-09!24;UBERON:0000344!1.55e-08!15;UBERON:0004921!1.68e-08!126;UBERON:0004185!1.68e-08!126;UBERON:0001242!2.28e-07!13;UBERON:0000060!2.28e-07!13;UBERON:0001262!2.28e-07!13;UBERON:0004786!2.28e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.58e-19,47;UBERON:0000160,1.14e-15,31;UBERON:0004119,5.10e-12,118;UBERON:0000925,5.10e-12,118;UBERON:0006595,5.10e-12,118;UBERON:0001007,4.58e-11,116;UBERON:0001555,4.58e-11,116;UBERON:0007026,4.58e-11,116;UBERON:0004921,3.57e-10,114;UBERON:0004923,7.59e-09,24;UBERON:0000344,1.55e-08,15;UBERON:0001242,2.27e-07,13;UBERON:0001262,2.27e-07,13;UBERON:0004786,2.27e-07,13
|phase1_expression=3.52327463630547,14.3079917132138,13.1949779422965,14.8207463540347,7.51343594919521,11.4157904900085,11.2134067485852,12.3958390503913,5.490760163915,8.66038747391376,0.171217968225505,0.717949430958028,7.01922992717943,4.54586092578786,4.33042690360362,3.03712901084739,2.09868563438444,7.72882305127682,6.99283611389268,9.76096199135469,3.99703463710028,5.36171136484781,5.74639536105658,18.879105889622,16.9762867989706,10.9104073181854,19.8150518233174,12.4973314957816,34.9643091799728,23.4388020676736,26.6076612786366,1.27006134691926,0.61506478758457,15.8481681015439,10.6875099307972,8.81043620400009,10.8209758819056,11.3003540298965,11.720030167857,7.32933241563318,15.8822501768374,15.0270006690858,9.71020706062307,2.39203954153597,2.83855407414641,1.28482726513177,0.782391344348039,3.2703773457067,2.19686182734472,3.4997381833371,4.05960622713551,1.43752564364972,7.71799987865587,7.25362142011344,15.4603147605533,2.31533492432352,3.15186783932632,2.06268836910977,1.41621522601718,3.1739458756322,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,0,0,1.49800055259202,1.92109152660777,0.933206510776299,0.945041568321835,0.630974884054146,1.14260393761521,1.10434270475807,1.71487118900936,0.862609239164127,2.75765635983006,0,1.65993539510744,3.22573719838111,0.923204014111357,1.73826522844578,1.56274011167028,2.23346399201105,1.68828783009504,3.51435969886663,3.24091444021034,2.70506193518296,1.86399445825301,2.95332153999418,3.85414956544606,4.05810284182349,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,5.82434953226536,5.05599912474307,3.57903677413921,2.07828803682295,1.7666978725517,5.63373679106722,2.56652954828636,2.54805239706646,7.11066703153331,7.57718643539249,5.82727690592727,6.0662933401774,8.79215873836762,11.9111426477699,6.67989625791711,4.16364784238726,5.78484408793068,8.76338889573022,6.17962826265753,8.34879820663504,4.90099706185734,30.404981031328,16.0505286181102,9.73071607144862,4.36770494858005,4.41683036920787,3.39412677194655,54.0536107532554,3.51336956413857,4.39838084308256,22.480220858356,3.95389910869537,5.99902730993408,5.59108999121485,2.69623150928681,3.20250421973039,1.88481528169297,0.695297280769106,2.55715457330331,2.0778804455956,4.05603157669394,4.78645010096487,6.84238338355512,7.32895999457657,7.36546495602659,5.33493816147085,2.29902104433473,4.86167750474443,3.31550599238573,4.96666443804693,2.8185018462667,2.90475346135159,7.76110112217047,2.58681591519411,3.59301552318857,2.99116911078713,4.60311038097907,4.72680323683516,6.268538997399,9.05441400194951,2.58744546864041,4.21327912387941,4.63226232806487,2.84163499395593,3.52113813310353,2.81431271977315,5.94204802821349,5.68187365404505,3.93528463494808,4.62801338662135,4.65067889500816,3.21928081679543,6.07179780309281,4.11399624783701,4.59668899421467,5.18840381093477,5.26319954731196,3.07370161407471,3.75777972529041,2.73376933133365,3.19004298375782,35.6852285622502,11.1069237998689,4.69234151177515,4.64473343720877,15.3352278973291,17.1430995929841,13.1203045868473,15.7887269673424,22.302865892592,16.6345944271251,11.8127548136127,13.5290400987983,13.6474860983384,22.4704852163555,23.1267713365923,22.9012464242522,4.1726938209678,3.42745537829186,2.25415471346161,3.66572390121566,4.26695471768777,5.40045813155453,5.12215950706484,7.82333784291891,5.80895293013087,6.78684401569903,5.63259991465583,3.33690211432188,3.73462090715086,6.52100125916076,5.27436315610108,3.37648023653384,4.32863948028414,4.02774592431135,5.83686816390127,3.84385978463314,8.62609239164127,2.97712758134803,4.68056509671841,4.79899868099512,3.58794827043824,5.78932225636041,7.57488079683079,1.89491411770485,2.77040459951444,4.58311731593008,7.27539769694356,7.20276906999808,6.9032655856944,11.7080188714679,5.83250033192907,9.08005227559977,6.218735977642,7.04612253277673,6.90739927463582,6.94315481191256,0,4.35124547054968,3.44234991113325,4.69092468718045,4.17431533968259,4.21962071731931,2.13115428989678,6.05930225290495,4.10160685241134,1.95219372148319,2.80050417052639,1.43381278771531,2.00518806674155,2.83076530788832,5.26253912177363,1.16902343164525,2.37172666767914,1.60660658210904,7.66476460124651,4.45164009168138,5.21238269931443,11.5479086080775,1.32745138339963,4.85561272309963,2.41858845571801,4.14931175462976,3.83892460745005,1.84461088766356,7.23599220871019,5.45300594216258,4.27796854061666,5.05658812697306,4.21674434299995,1.03135543248187,3.40439605753788,3.78128297465751,4.2688365648309,4.92975180572662,5.67488747655275,3.21063871683727,4.77192159746151,1.522324745573,16.6616912725234,25.6316805745222,3.52845436887939,12.366468970611,14.3703339759356,10.8563264870681,11.8178620563105,13.29541287935,21.2781010739791,4.63563255026274,6.32222258952055,3.92135049130123,5.55583582109135,3.76736914009382,5.19438065339896,4.80434163733698,7.30907248973578,5.59805809294632,5.11339903076368,21.0027535963325,6.01038387804157,9.35269548783504,10.8005340821801,13.5907392409405,12.2283035697859,14.7002137559455,13.8857805618564,12.3025292732494,35.7737326285348,10.5627683224777,0.56369293868419,2.54178128274764,3.47462829959905,2.52786544847262,1.6790777052105,2.19642963138012,4.22486059124714,2.47388331203505,3.98465508817701,1.69108884578204,2.30424005006292,5.05617793005085,5.0681303822541,4.10843828659309,3.89762468933385,2.68540043501222,2.98022032171897,2.28371354087941,3.10148007066612,3.23092639834072,2.59103142626999,2.11734988787365,2.72882066071307,3.2712026157712,3.27255326108393,7.48210265930198,9.10142408833665,14.0850754876877,15.7811539382234,18.1598218390259,7.69498149349846,8.24182309202693,13.2908395029021,8.52672576860118,0,3.22227665555024,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,4.65984280576638,2.17953429926771,1.99512436700516,3.58540572083682,4.86213434136588,3.98265008993166,3.49302666055027,4.22268782823069,4.73880631649457,5.77654577265267,4.54854981174835,4.56262739802432,5.09291121742406,3.27745276144588,3.64943368707755,4.36509564062661,1.42888107384922,3.59241410429052,3.8581844092741,6.59337441285291,5.7407578852415,6.51451579532289,4.08194354166476,6.91464950847231,5.66851024866081,6.68176600948847,4.99226186560891,4.024415403201,5.26139422875686,4.20992752922171,7.2948495315506,3.79632057997357,3.25064791839359,2.86461730218783,6.35241048862461,5.01557188550968,4.99621155875892,5.84829021113521,6.66100267549725,6.31251495827183,5.7353768971074,4.40548887678801
|phase1_expression=3.52327463630547,14.3079917132138,13.1949779422965,14.8207463540347,7.51343594919521,11.4157904900085,11.2134067485852,12.3958390503913,5.490760163915,8.66038747391376,0.171217968225505,0.717949430958028,7.01922992717943,4.54586092578786,4.33042690360362,3.03712901084739,2.09868563438444,7.72882305127682,6.99283611389268,9.76096199135469,3.99703463710028,5.36171136484781,5.74639536105658,18.879105889622,16.9762867989706,10.9104073181854,19.8150518233174,12.4973314957816,34.9643091799728,23.4388020676736,26.6076612786366,1.27006134691926,0.61506478758457,15.8481681015439,10.6875099307972,8.81043620400009,10.8209758819056,11.3003540298965,11.720030167857,7.32933241563318,15.8822501768374,15.0270006690858,9.71020706062307,2.39203954153597,2.83855407414641,1.28482726513177,0.782391344348039,3.2703773457067,2.19686182734472,3.4997381833371,4.05960622713551,1.43752564364972,7.71799987865587,7.25362142011344,15.4603147605533,2.31533492432352,3.15186783932632,2.06268836910977,1.41621522601718,3.1739458756322,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,0,0,1.49800055259202,1.92109152660777,0.933206510776299,0.945041568321835,0.630974884054146,1.14260393761521,1.10434270475807,1.71487118900936,0.862609239164127,2.75765635983006,0,1.65993539510744,3.22573719838111,0.923204014111357,1.73826522844578,1.56274011167028,2.23346399201105,1.68828783009504,3.51435969886663,3.24091444021034,2.70506193518296,1.86399445825301,2.95332153999418,3.85414956544606,4.05810284182349,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,5.82434953226536,5.05599912474307,3.57903677413921,2.07828803682295,1.7666978725517,5.63373679106722,2.56652954828636,2.54805239706646,7.11066703153331,7.57718643539249,5.82727690592727,6.0662933401774,8.79215873836762,11.9111426477699,6.67989625791711,4.16364784238726,5.78484408793068,8.76338889573022,6.17962826265753,8.34879820663504,4.90099706185734,30.404981031328,16.0505286181102,9.73071607144862,4.36770494858005,4.41683036920787,3.39412677194655,54.0536107532554,3.51336956413857,4.39838084308256,22.480220858356,3.95389910869537,5.99902730993408,5.59108999121485,2.69623150928681,3.20250421973039,1.88481528169297,0.695297280769106,2.55715457330331,2.0778804455956,4.05603157669394,4.78645010096487,6.84238338355512,7.32895999457657,7.36546495602659,5.33493816147085,2.29902104433473,4.86167750474443,3.31550599238573,4.96666443804693,2.8185018462667,2.90475346135159,7.76110112217047,2.58681591519411,3.59301552318857,2.99116911078713,4.60311038097907,4.72680323683516,6.268538997399,9.05441400194951,2.58744546864041,4.21327912387941,4.63226232806487,2.84163499395593,3.52113813310353,2.81431271977315,5.94204802821349,5.68187365404505,3.93528463494808,4.62801338662135,4.65067889500816,3.21928081679543,6.07179780309281,4.11399624783701,4.59668899421467,5.18840381093477,5.26319954731196,3.07370161407471,3.75777972529041,2.73376933133365,3.19004298375782,35.6852285622502,11.1069237998689,4.69234151177515,4.64473343720877,15.3352278973291,17.1430995929841,13.1203045868473,15.7887269673424,22.302865892592,16.6345944271251,11.8127548136127,13.5290400987983,13.6474860983384,22.4704852163555,23.1267713365923,22.9012464242522,4.1726938209678,3.42745537829186,2.25415471346161,3.66572390121566,4.26695471768777,5.40045813155453,5.12215950706484,7.82333784291891,5.80895293013087,6.78684401569903,5.63259991465583,3.33690211432188,3.73462090715086,6.52100125916076,5.27436315610108,3.37648023653384,4.32863948028414,4.02774592431135,5.83686816390127,3.84385978463314,8.62609239164127,2.97712758134803,4.68056509671841,4.79899868099512,3.58794827043824,5.78932225636041,7.57488079683079,1.89491411770485,2.77040459951444,4.58311731593008,7.27539769694356,7.20276906999808,6.9032655856944,11.7080188714679,5.83250033192907,9.08005227559977,6.218735977642,7.04612253277673,6.90739927463582,6.94315481191256,0,4.35124547054968,3.44234991113325,4.69092468718045,4.17431533968259,4.21962071731931,2.13115428989678,6.05930225290495,4.10160685241134,1.95219372148319,2.80050417052639,1.43381278771531,2.00518806674155,2.83076530788832,5.26253912177363,1.16902343164525,2.37172666767914,1.60660658210904,7.66476460124651,4.45164009168138,5.21238269931443,11.5479086080775,1.32745138339963,4.85561272309963,2.41858845571801,4.14931175462976,3.83892460745005,1.84461088766356,7.23599220871019,5.45300594216258,4.27796854061666,5.05658812697306,4.21674434299995,1.03135543248187,3.40439605753788,3.78128297465751,4.2688365648309,4.92975180572662,5.67488747655275,3.21063871683727,4.77192159746151,1.522324745573,16.6616912725234,25.6316805745222,3.52845436887939,12.366468970611,14.3703339759356,10.8563264870681,11.8178620563105,13.29541287935,21.2781010739791,4.63563255026274,6.32222258952055,3.92135049130123,5.55583582109135,3.76736914009382,5.19438065339896,4.80434163733698,7.30907248973578,5.59805809294632,5.11339903076368,21.0027535963325,6.01038387804157,9.35269548783504,10.8005340821801,13.5907392409405,12.2283035697859,14.7002137559455,13.8857805618564,12.3025292732494,35.7737326285348,10.5627683224777,0.56369293868419,2.54178128274764,3.47462829959905,2.52786544847262,1.6790777052105,2.19642963138012,4.22486059124714,2.47388331203505,3.98465508817701,1.69108884578204,2.30424005006292,5.05617793005085,5.0681303822541,4.10843828659309,3.89762468933385,2.68540043501222,2.98022032171897,2.28371354087941,3.10148007066612,3.23092639834072,2.59103142626999,2.11734988787365,2.72882066071307,3.2712026157712,3.27255326108393,7.48210265930198,9.10142408833665,14.0850754876877,15.7811539382234,18.1598218390259,7.69498149349846,8.24182309202693,13.2908395029021,8.52672576860118,0,3.22227665555024,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,4.65984280576638,2.17953429926771,1.99512436700516,3.58540572083682,4.86213434136588,3.98265008993166,3.49302666055027,4.22268782823069,4.73880631649457,5.77654577265267,4.54854981174835,4.56262739802432,5.09291121742406,3.27745276144588,3.64943368707755,4.36509564062661,1.42888107384922,3.59241410429052,3.8581844092741,6.59337441285291,5.7407578852415,6.51451579532289,4.08194354166476,6.91464950847231,5.66851024866081,6.68176600948847,4.99226186560891,4.024415403201,5.26139422875686,4.20992752922171,7.2948495315506,3.79632057997357,3.25064791839359,2.86461730218783,6.35241048862461,5.01557188550968,4.99621155875892,5.84829021113521,6.66100267549725,6.31251495827183,5.7353768971074,4.40548887678801
|short_description=p2@Pak2
|short_description=p2@Pak2
}}
}}

Latest revision as of 21:14, 1 October 2015

Short description:p2@Pak2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pak2_5end
Coexpression cluster:MCL_coexpression_mm9:1960
Association with transcript: 113bp_to_NM_177326, uc007yyd.1_5end
EntrezGene:Pak2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pak2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.42
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.98
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I212.50
Ileum epithelium, pool1.CNhs13199.10252-104B934.96
Ileum epithelium, pool2.CNhs13232.10253-104C123.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F93.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A830.40
aorta, adult.CNhs10498.46-23H116.05
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H454.05
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H722.48
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.59
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I335.69
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H417.14
intestine, embryo E17.CNhs10582.482-18D313.12
intestine, embryo E18.CNhs10526.1289-20F715.79
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E916.63
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A513.65
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E323.13
intestine, neonate N30.CNhs11131.1384-42G122.90
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G75.40
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C611.71
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G611.55
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G325.63
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H310.86
skin, neonate N06.CNhs11097.693-20I511.82
skin, neonate N10.CNhs11108.762-6C413.30
small intestine, neonate N16.CNhs11114.790-21I121.28
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F25.56
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D410.80
stomach, embryo E17.CNhs11006.1035-18D513.59
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B814.70
stomach, neonate N07.CNhs11210.718-18A913.89
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I135.77
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E418.16
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D513.29
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system8.58e-1947
intestine1.14e-1531
endoderm-derived structure5.10e-12118
endoderm5.10e-12118
presumptive endoderm5.10e-12118
digestive system4.58e-11116
digestive tract4.58e-11116
primitive gut4.58e-11116
subdivision of digestive tract3.57e-10114
organ component layer7.59e-0924
mucosa1.55e-0815
intestinal mucosa2.27e-0713
wall of intestine2.27e-0713
gastrointestinal system mucosa2.27e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:32079210..32079245,-&oldid=4322679"