FFCP PHASE1:Hg19::chr12:131118370..131118390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000541840_5end | |association_with_transcript=15bp_to_ENST00000541840_5end | ||
|cluster_id=chr12:131118370..131118390,- | |||
|coexpression_cluster_id=C3255 | |||
|description=CAGE_peak_5_at_ENST00000541840_5end | |description=CAGE_peak_5_at_ENST00000541840_5end | ||
|id=chr12:131118370..131118390,- | |id=chr12:131118370..131118390,- | ||
|ontology_enrichment_celltype=CL:0000242!7.92e-09!2 | |ontology_enrichment_celltype=CL:0000242!7.92e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.41e-31;2!CL:0000242;6.41e-31;2!CL:0000312;5.27e-13;5!CL:0000240;5.36e-11;6!CL:0000311;5.36e-11;6!CL:0000079;5.36e-11;6!CL:0000237;5.36e-11;6!CL:0000047;7.49e-09;2!CL:0002535;7.49e-09;2!CL:0000362;1.25e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.04e-31,2;CL:0000312,4.39e-13,5;CL:0000240,4.60e-11,6;CL:0000311,4.60e-11,6;CL:0000079,4.60e-11,6;CL:0000237,4.60e-11,6;CL:0000036,4.60e-11,6;CL:0000357,4.60e-11,6;CL:0000114,4.60e-11,6;CL:0002535,8.09e-09,2;CL:0000362,1.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;5.36e-11;6!CL:0000114;5.36e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.00e-17;1!DOID:1357;7.00e-17;1!DOID:4362;3.76e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.47e-17,1;DOID:1357,6.47e-17,1;DOID:4362,4.13e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.82e-28!82;UBERON:0000073!2.92e-27!94;UBERON:0001016!2.92e-27!94;UBERON:0005743!3.10e-26!86;UBERON:0001049!6.91e-24!57;UBERON:0005068!6.91e-24!57;UBERON:0006241!6.91e-24!57;UBERON:0007135!6.91e-24!57;UBERON:0002616!1.33e-20!59;UBERON:0000955!2.84e-20!69;UBERON:0006238!2.84e-20!69;UBERON:0003075!3.57e-17!86;UBERON:0007284!3.57e-17!86;UBERON:0002346!3.69e-16!90;UBERON:0002298!1.01e-15!8;UBERON:0002780!3.22e-15!41;UBERON:0001890!3.22e-15!41;UBERON:0006240!3.22e-15!41;UBERON:0003080!8.77e-15!42;UBERON:0004121!2.28e-14!169;UBERON:0000924!7.32e-14!173;UBERON:0006601!7.32e-14!173;UBERON:0007023!1.14e-12!115;UBERON:0002020!1.36e-11!34;UBERON:0003528!1.36e-11!34;UBERON:0001896!1.53e-11!3;UBERON:0005290!1.53e-11!3;UBERON:0010096!1.53e-11!3;UBERON:0001893!2.04e-11!34;UBERON:0000988!2.27e-11!3;UBERON:0003076!6.86e-11!15;UBERON:0003057!6.86e-11!15;UBERON:0001869!2.82e-10!32;UBERON:0004733!2.93e-10!12;UBERON:0002028!2.93e-10!12;UBERON:0007277!2.93e-10!12;UBERON:0000033!3.00e-10!123;UBERON:0002791!7.09e-10!33;UBERON:0000153!1.59e-09!129;UBERON:0007811!1.59e-09!129;UBERON:0003296!1.61e-09!4;UBERON:0010133!1.61e-09!4;UBERON:0004732!2.03e-09!13;UBERON:0003056!3.23e-09!61;UBERON:0000007!4.65e-09!2;UBERON:0002148!3.87e-08!2;UBERON:0009662!3.87e-08!2;UBERON:0002360!1.29e-07!2;UBERON:0000094!1.29e-07!2;UBERON:0007645!1.29e-07!2;UBERON:0000956!3.70e-07!25;UBERON:0000203!3.70e-07!25;UBERON:0001950!4.39e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.55e-35;4!UBERON:0010133;3.55e-35;4!UBERON:0000007;4.24e-32;2!UBERON:0001894;1.97e-20;7!UBERON:0001764;7.00e-17;1!UBERON:0001825;7.00e-17;1!UBERON:0000002;4.05e-11;6!UBERON:0001560;4.05e-11;6!UBERON:0001905;7.49e-09;2!UBERON:0002757;7.49e-09;2!UBERON:0010134;7.49e-09;2!UBERON:0006955;7.49e-09;2!UBERON:0005408;7.49e-09;2!UBERON:0004801;7.49e-09;2!UBERON:0001899;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.75e-35,4;UBERON:0010133,4.75e-35,4;UBERON:0000007,4.59e-32,2;UBERON:0001894,2.32e-20,7;UBERON:0006222,2.32e-20,7;UBERON:0001764,6.47e-17,1;UBERON:0001825,6.47e-17,1;UBERON:0000002,4.37e-11,6;UBERON:0001560,4.37e-11,6;UBERON:0006955,8.09e-09,2;UBERON:0004801,8.09e-09,2;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2 | |||
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| ||
|short_description=p5@ENST00000541840 | |short_description=p5@ENST00000541840 | ||
}} | }} |
Latest revision as of 06:45, 24 July 2015
Short description: | p5@ENST00000541840 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000541840_5end |
Coexpression cluster: | C3255_pituitary_smallcell_maxillary_neuroblastoma_argyrophil_gastrointestinal_small |
Association with transcript: | 15bp_to_ENST00000541840_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.04e-31 | 2 |
keratinocyte | 4.39e-13 | 5 |
stratified squamous epithelial cell | 4.60e-11 | 6 |
keratin accumulating cell | 4.60e-11 | 6 |
stratified epithelial cell | 4.60e-11 | 6 |
keratinizing barrier epithelial cell | 4.60e-11 | 6 |
epithelial fate stem cell | 4.60e-11 | 6 |
stratified epithelial stem cell | 4.60e-11 | 6 |
surface ectodermal cell | 4.60e-11 | 6 |
epithelial cell of cervix | 8.09e-09 | 2 |
epidermal cell | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 4.75e-35 | 4 |
neuroendocrine gland | 4.75e-35 | 4 |
pituitary gland | 4.59e-32 | 2 |
diencephalon | 2.32e-20 | 7 |
future diencephalon | 2.32e-20 | 7 |
maxillary sinus | 6.47e-17 | 1 |
paranasal sinus | 6.47e-17 | 1 |
uterine cervix | 4.37e-11 | 6 |
neck of organ | 4.37e-11 | 6 |
uterine epithelium | 8.09e-09 | 2 |
cervix epithelium | 8.09e-09 | 2 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.47e-17 | 1 |
maxillary sinus cancer | 6.47e-17 | 1 |
cervical cancer | 4.13e-13 | 5 |