FFCP PHASE1:Hg19::chr12:133264004..133264012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5426 | |EntrezGene=5426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9177 | |HGNC=9177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000539357_5end | |association_with_transcript=-53bp_to_ENST00000539357_5end | ||
|cluster_id=chr12:133264004..133264012,- | |||
|description=CAGE_peak_2_at_POLE_5end | |description=CAGE_peak_2_at_POLE_5end | ||
|id=chr12:133264004..133264012,- | |id=chr12:133264004..133264012,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.52e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.22e-11;2!UBERON:0001954;5.22e-11;2!UBERON:0002757;5.22e-11;2!UBERON:0010134;5.22e-11;2!UBERON:0003022;5.22e-11;2!UBERON:0005408;5.22e-11;2!UBERON:0002421;5.22e-11;2!UBERON:0001899;5.22e-11;2!UBERON:0002600;5.22e-11;2!UBERON:0002037;9.32e-09;6!UBERON:0002134;9.50e-07;1!UBERON:0005208;9.50e-07;1!UBERON:0004145;9.50e-07;1!UBERON:0005946;9.50e-07;1!UBERON:0005965;9.50e-07;1!UBERON:0002078;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.76e-11,2;UBERON:0003022,4.76e-11,2;UBERON:0002421,4.76e-11,2;UBERON:0002600,4.76e-11,2;UBERON:0001905,2.03e-10,2;UBERON:0002757,2.03e-10,2;UBERON:0010134,2.03e-10,2;UBERON:0005408,2.03e-10,2;UBERON:0001899,2.03e-10,2;UBERON:0002037,9.02e-09,6;UBERON:0006215,9.02e-09,6;UBERON:0004145,9.55e-08,3;UBERON:0002346,3.57e-07,86;UBERON:0001049,3.79e-07,56;UBERON:0005068,3.79e-07,56;UBERON:0006241,3.79e-07,56;UBERON:0007135,3.79e-07,56 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.157421562627358,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0,0,0,2.21598163412751,0.401088894940283,1.08505435357926,0.671746422719773,0.971680998056939,0.257575567634187,0,0.377875943688809,1.21292030593908,0.697287110717054,0.411167888021826,0.619412741790207,0,0,0.945928919554341,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0,0.641858054152187,0,0,0.797854630486527,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,0.850417199860174,0.628975936525128,0.336985893439485,0.450530678524519,1.28580469357664,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0.786021525498329,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.812411591295047,0.384273959177026,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,1.14966148080576,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.76791966692651,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0,0.795285947051099,0,0,0,0,0.589405839739707,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0.371457501329565,0.198762407366705,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.413303124703062,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.427114777637135,0,0.600182192168805,0.206105058476878,1.03056216018252,0,0.843881661206331,0.389748020644795,0.252433774244115,0.184099797284599,0.484938170456436,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.380508304469197,0,0,0.738651018262192,0.936017060556951,0.594524649154913,0,0,0,0.179117045405697,0,0.383382679165211,1.97065295158377,0,0.414656231081544,0,0.37872730027914,0.126995788584338,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0.112085143993527,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0.644566922551274,0,0.182091168006717,0,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0,0.447749509444357,0.877039506583738,0.261435451024901,0,0,0,0.309123034943167,0.457847324091717,0.41254749960294,0,0,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,1.27281299170375,0.78494864019923,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0,0,0.272999822815972,0.141405431953713,1.13008116620243,1.10273068709225,0,0,0,0,0,0.6196469961995,0,0.286822704408103,0,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,0,0.320472213382419,0,0.490080431962063,0,0.144269212976445,0,0,0.199579371432817,0.383010740264733,0,0.324621940274555,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0.36408156524854,0.334330152832435,0,1.19372242368845,1.18785872333055,0.307160702099232,0,0.562677665642051,0,0.16480387422676,0,0.796991953004279,0.828851746593443,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.493217028184668,0,0,0,0.1855361963237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| ||
|short_description=p2@POLE | |short_description=p2@POLE | ||
}} | }} |
Latest revision as of 11:10, 17 September 2015
Short description: | p2@POLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_POLE_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000539357_5end |
EntrezGene: | POLE |
HGNC: | 9177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.76e-11 | 2 |
lobe parts of cerebral cortex | 4.76e-11 | 2 |
hippocampal formation | 4.76e-11 | 2 |
limbic lobe | 4.76e-11 | 2 |
pineal body | 2.03e-10 | 2 |
regional part of epithalamus | 2.03e-10 | 2 |
secretory circumventricular organ | 2.03e-10 | 2 |
circumventricular organ | 2.03e-10 | 2 |
epithalamus | 2.03e-10 | 2 |
cerebellum | 9.02e-09 | 6 |
rhombic lip | 9.02e-09 | 6 |
outflow tract | 9.55e-08 | 3 |
neurectoderm | 3.57e-07 | 86 |
neural tube | 3.79e-07 | 56 |
neural rod | 3.79e-07 | 56 |
future spinal cord | 3.79e-07 | 56 |
neural keel | 3.79e-07 | 56 |