FFCP PHASE1:Hg19::chr12:16109519..16109568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51071 | |EntrezGene=51071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24269 | |HGNC=24269 | ||
|TSSclassifier=strong | |||
|UniProt=G3V158 | |UniProt=G3V158 | ||
|association_with_transcript=0bp_to_ENST00000526530_5end | |association_with_transcript=0bp_to_ENST00000526530_5end | ||
|cluster_id=chr12:16109519..16109568,+ | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_6_at_DERA_5end | |description=CAGE_peak_6_at_DERA_5end | ||
|id=chr12:16109519..16109568,+ | |id=chr12:16109519..16109568,+ | ||
|ontology_enrichment_celltype=CL:1000497!2.75e-09!18;CL:0002518!2.75e-09!18;CL:0000240!2.81e-07!6;CL:0000311!2.81e-07!6;CL:0000079!2.81e-07!6;CL:0000237!2.81e-07!6;CL:0000036!2.81e-07!6;CL:0000357!2.81e-07!6;CL:0000114!2.81e-07!6;CL:0002231!2.89e-07!3 | |ontology_enrichment_celltype=CL:1000497!2.75e-09!18;CL:0002518!2.75e-09!18;CL:0000240!2.81e-07!6;CL:0000311!2.81e-07!6;CL:0000079!2.81e-07!6;CL:0000237!2.81e-07!6;CL:0000036!2.81e-07!6;CL:0000357!2.81e-07!6;CL:0000114!2.81e-07!6;CL:0002231!2.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;8.17e-11;3!CL:0000737;1.96e-08;4!CL:1000497;1.02e-07;17!CL:0002518;1.02e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,8.17e-11,3;CL:0000513,8.17e-11,3;CL:0000737,1.96e-08,4;CL:1000497,1.02e-07,17;CL:0002518,1.02e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.17e-26;10!UBERON:0007687;3.17e-26;10!UBERON:0003104;1.27e-15;31!CL:0000513;8.17e-11;3 | |||
|ontology_enrichment_disease=DOID:4468!4.02e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!4.10e-14!55;UBERON:0005173!4.10e-14!55;UBERON:0002113!4.01e-13!27;UBERON:0003918!4.01e-13!27;UBERON:0005095!4.01e-13!27;UBERON:0007687!4.01e-13!27;UBERON:0002417!2.01e-12!61;UBERON:0000916!2.01e-12!61;UBERON:0006554!3.63e-11!44;UBERON:0001008!7.19e-11!45;UBERON:0000489!8.08e-11!32;UBERON:0003887!1.46e-07!21;UBERON:0006555!7.89e-07!17;UBERON:0005103!7.89e-07!17;UBERON:0000083!7.89e-07!17;UBERON:0009201!7.89e-07!17;UBERON:0004819!7.89e-07!17;UBERON:0006553!7.89e-07!17;UBERON:0003074!7.89e-07!17;UBERON:0003060!7.89e-07!17;UBERON:0005177!8.54e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.15e-11;24!UBERON:0011143;2.15e-11;24!UBERON:0000489;1.50e-09;29!UBERON:0006554;2.97e-09;30!UBERON:0001008;2.97e-09;30!UBERON:0005172;4.59e-07;52!UBERON:0005173;4.59e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.40e-10,26;UBERON:0003918,1.40e-10,26;UBERON:0011143,1.40e-10,26;UBERON:0005095,1.40e-10,26;UBERON:0007687,1.40e-10,26;UBERON:0000489,5.54e-09,31;UBERON:0005172,6.69e-09,54;UBERON:0005173,6.69e-09,54;UBERON:0002417,4.71e-08,60;UBERON:0000916,4.71e-08,60;UBERON:0003103,3.56e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.231046011313244,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6723970779552,3.8220135030964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.231046011313244,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6723970779552,3.8220135030964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p6@DERA | |short_description=p6@DERA | ||
}} | }} |
Latest revision as of 15:36, 17 September 2015
Short description: | p6@DERA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DERA_5end |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | 0bp_to_ENST00000526530_5end |
EntrezGene: | DERA |
HGNC: | 24269 |
UniProt: | G3V158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 8.17e-11 | 3 |
cardiac muscle myoblast | 8.17e-11 | 3 |
striated muscle cell | 1.96e-08 | 4 |
kidney cell | 1.02e-07 | 17 |
kidney epithelial cell | 1.02e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.40e-10 | 26 |
kidney mesenchyme | 1.40e-10 | 26 |
upper urinary tract | 1.40e-10 | 26 |
kidney rudiment | 1.40e-10 | 26 |
kidney field | 1.40e-10 | 26 |
cavitated compound organ | 5.54e-09 | 31 |
abdomen element | 6.69e-09 | 54 |
abdominal segment element | 6.69e-09 | 54 |
abdominal segment of trunk | 4.71e-08 | 60 |
abdomen | 4.71e-08 | 60 |
compound organ | 3.56e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.78e-15 | 2 |