FFCP PHASE1:Mm9::chr18:65740410..65740452,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:65740410..65740452,+ | |||
|description=CAGE_peak_at_chr18:65740410..65740452,+ | |description=CAGE_peak_at_chr18:65740410..65740452,+ | ||
|id=chr18:65740410..65740452,+ | |id=chr18:65740410..65740452,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.61e-08!33;CL:0000047!4.61e-08!33;CL:0000031!4.61e-08!33;CL:0000404!4.61e-08!33 | |ontology_enrichment_celltype=CL:0000540!4.61e-08!33;CL:0000047!4.61e-08!33;CL:0000031!4.61e-08!33;CL:0000404!4.61e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.81e-08,33;CL:0000047,3.81e-08,33;CL:0000031,3.81e-08,33;CL:0000404,3.81e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.87e-10!71;UBERON:0003075!3.87e-10!71;UBERON:0007284!3.87e-10!71;UBERON:0003056!8.45e-10!49;UBERON:0004121!9.42e-10!102;UBERON:0000924!9.42e-10!102;UBERON:0006601!9.42e-10!102;UBERON:0000468!1.04e-09!333;UBERON:0001017!2.73e-09!73;UBERON:0005743!2.73e-09!73;UBERON:0000033!3.15e-09!63;UBERON:0000073!5.78e-09!75;UBERON:0001016!5.78e-09!75;UBERON:0000922!2.78e-08!328;UBERON:0001049!6.88e-08!52;UBERON:0005068!6.88e-08!52;UBERON:0006241!6.88e-08!52;UBERON:0007135!6.88e-08!52;UBERON:0002780!8.06e-08!39;UBERON:0001890!8.06e-08!39;UBERON:0006240!8.06e-08!39;UBERON:0003080!1.29e-07!40;UBERON:0000955!2.39e-07!50;UBERON:0006238!2.39e-07!50;UBERON:0002616!6.89e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.99e-12,92;UBERON:0002346,1.39e-10,64;UBERON:0003075,1.39e-10,64;UBERON:0007284,1.39e-10,64;UBERON:0003056,6.64e-10,49;UBERON:0004121,7.36e-10,95;UBERON:0000924,7.36e-10,95;UBERON:0006601,7.36e-10,95;UBERON:0010371,8.11e-10,73;UBERON:0001017,2.42e-09,73;UBERON:0001016,5.15e-09,75;UBERON:0000073,6.03e-08,54;UBERON:0002780,6.71e-08,39;UBERON:0001890,6.71e-08,39;UBERON:0006240,6.71e-08,39;UBERON:0001049,7.58e-08,52;UBERON:0005068,7.58e-08,52;UBERON:0006241,7.58e-08,52;UBERON:0007135,7.58e-08,52;UBERON:0003080,1.08e-07,40;UBERON:0000922,1.12e-07,320;UBERON:0000955,1.69e-07,47;UBERON:0006238,1.69e-07,47;UBERON:0002616,5.06e-07,46 | |||
|phase1_expression=5.60520964866779,0,0.454999239389536,0,0,0.671517087647559,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,2.12608225377674,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.629484089877886,1.92616169317078,1.46837401729345,0.782391344348039,6.5407546914134,2.85592037554813,3.11087838518853,2.51975558925653,0,0,0,0,4.63066984864705,4.01146815914259,5.15672092277442,10.1158230429799,2.64495489636016,5.07065122804943,3.38844532069132,8.89294796111139,0.899899717281399,0.988866362566974,0.7104801149461,2.99600110518405,1.53687322128622,14.9313041724208,14.0406175864958,11.9885227970288,7.14127461009509,6.62605622854841,10.779190330916,11.6931474642248,8.27296907949019,5.50579404996943,3.83062014255563,3.99376986466233,8.70449499019279,7.50198677539759,12.5019208933622,2.51264699101243,5.06486349028512,3.97275444219706,5.30331453852602,6.40672563595963,8.76077395378913,3.10477392666055,3.47629176491213,8.69593466105033,2.58127163094416,0,0,0.649776417447669,0,1.68533304158102,3.2381761289831,1.55871602761721,1.06001872353102,5.21120653173718,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,0.760079596425296,0.505524445014783,0.5709193985953,0.258937883647172,4.15637989381509,5.20455980298408,6.39377504455497,3.22861696158482,3.61734337326294,4.9387256996996,3.14166478324189,0.988779870937496,1.59059292611903,0,8.41187619726528,3.09178125844551,2.90925151881133,0,3.80615036115011,5.44561437714983,0.766371165625774,0.359445373517761,0,0.127070227073065,3.59497534571574,3.20250421973039,9.42407640846483,5.73620256634512,3.83573185995496,5.61027720310812,5.67844420737152,10.6931332042832,2.73695335342205,2.0217820674694,6.10281382070775,5.59517904739626,7.58676944630461,5.94205028357652,6.63101198477146,9.66118287948856,7.04625461566674,10.9631017734883,5.43277078551933,6.03590380211958,10.7790465695657,9.32540958068929,8.76782929710299,6.67313398141435,6.61679116392116,4.32142486456681,12.1410902759281,0,0,0,4.76389276831654,4.92504725960302,7.74266864282364,7.33908680314152,9.44468312387538,4.78228049950873,6.51095045301142,5.633741429392,6.77238985729583,6.7469538464527,6.23836363500562,4.78305976320549,5.11699955988663,4.83010253640311,4.96563749413376,7.78072809687271,13.6863134464448,0,0.264450566663544,9.38468302355029,11.147360249301,5.92790322081629,5.84882221407693,4.22518283305254,2.85338439168839,1.42358718463353,3.78807595865225,1.50801125280162,4.17808591286417,4.09424582950152,0.898819408654221,1.08069024937347,0.398282546508734,5.50036912763937,6.51216521875454,5.63538678365402,8.14605311381257,9.89157684554891,7.50453272826409,6.63983639804701,3.54264355151045,2.511979645462,1.48076596706161,0.296452627087149,1.00107063429656,3.34150291692445,1.12431056192427,1.01430060694251,0.964708639009667,1.52775511068852,1.43848068725405,1.45921704097532,3.0201755450689,0,3.72140947668503,1.87222603868736,2.77836765741823,1.61457672169721,1.92977408545347,4.0645701836653,4.73728529426212,5.54080919902888,9.33597971763535,8.21415869009757,7.37027532743989,10.2358765580986,7.80534591431195,8.82756806994669,7.30833475840957,10.2051051940792,4.91589944147214,6.56202931090403,4.91806799177139,0,0,2.95058563811422,4.69092468718045,3.37156238974363,5.39173758324135,1.96721934452011,5.04941854408746,6.31016438832513,6.24701990874622,6.46270193198397,8.36390792833932,6.23836287430704,9.34152551603147,7.69140333182299,6.72188473196017,6.32460444714438,10.9249247583414,6.24536374916382,9.08134578703002,12.7051828295789,7.58862565673663,0,7.52619972080442,4.23252979750651,3.20628635585027,3.54362271456927,3.99665692327106,6.20227903603731,4.36240475373007,4.27796854061666,2.84433082142234,1.05418608574999,2.06271086496374,4.08527526904546,9.00305470156551,7.89087971074802,10.502514716548,7.80297028026004,10.3453914209201,7.56925494769756,7.30715877875038,1.17335854031855,4.44847348814022,0.220528398054962,2.63818004706368,4.52100394748536,4.34253059482722,3.70054266409723,4.26766339337159,2.04036585640896,2.22510362412612,0.683483523191411,6.81076664278634,5.18544676635193,0.941842285023455,0.410082683163076,1.60144721244566,1.69978429993855,1.53946597556024,1.65839968565309,0.954670618015114,9.64824780422463,8.13277868507395,6.26430976766447,5.22720740036172,6.11415178489297,5.79916689454729,7.43881101528023,2.35580347785627,2.46268449254406,3.72803587852155,1.12738587736838,8.67195967055077,8.27292452285488,7.97249872210595,6.58715099736429,7.94093789806657,7.86293498926552,8.46328501485676,6.92071673209692,3.38217769156408,3.74439008135225,0,2.02725215290164,2.67048488628551,0.77952493786677,1.25318686967237,0.596044064343795,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,3.17422537061296,2.66383144048878,1.16628013592318,0.839423081820392,7.14801497919105,2.064507229963,5.86085197655248,5.35920947697665,2.00628841614145,5.64751842617067,3.22227665555024,4.01026859407578,5.67115501734169,7.53590771747707,5.2877572817279,6.07520250208625,2.2516060161211,6.34399372577886,2.07104124700728,5.29315472679301,9.17757208822371,6.31714341290296,6.56388136084394,4.40187641518763,7.16989682955055,6.88964856185007,4.12070114477788,4.49286893428541,6.31743029409494,4.30914809813408,6.79054828989874,5.80577346313271,7.23484222175023,6.31790158511746,8.57328644309533,7.06894388263618,8.10218725947561,5.35711671044299,6.32955356577908,3.42869252385415,5.6792257970988,6.43777712857767,5.52316383202848,6.68176600948847,6.76916863133412,5.48783918618318,6.05060336307039,5.29636043998861,6.73370725989286,6.52492599682958,7.09232273104057,4.91077251803627,6.8172210121825,5.20847849649082,6.49507502638659,4.67863216890817,6.44613162144895,5.92993829413414,2.64709702943419,3.70988536992674 | |phase1_expression=5.60520964866779,0,0.454999239389536,0,0,0.671517087647559,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,2.12608225377674,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.629484089877886,1.92616169317078,1.46837401729345,0.782391344348039,6.5407546914134,2.85592037554813,3.11087838518853,2.51975558925653,0,0,0,0,4.63066984864705,4.01146815914259,5.15672092277442,10.1158230429799,2.64495489636016,5.07065122804943,3.38844532069132,8.89294796111139,0.899899717281399,0.988866362566974,0.7104801149461,2.99600110518405,1.53687322128622,14.9313041724208,14.0406175864958,11.9885227970288,7.14127461009509,6.62605622854841,10.779190330916,11.6931474642248,8.27296907949019,5.50579404996943,3.83062014255563,3.99376986466233,8.70449499019279,7.50198677539759,12.5019208933622,2.51264699101243,5.06486349028512,3.97275444219706,5.30331453852602,6.40672563595963,8.76077395378913,3.10477392666055,3.47629176491213,8.69593466105033,2.58127163094416,0,0,0.649776417447669,0,1.68533304158102,3.2381761289831,1.55871602761721,1.06001872353102,5.21120653173718,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,0.760079596425296,0.505524445014783,0.5709193985953,0.258937883647172,4.15637989381509,5.20455980298408,6.39377504455497,3.22861696158482,3.61734337326294,4.9387256996996,3.14166478324189,0.988779870937496,1.59059292611903,0,8.41187619726528,3.09178125844551,2.90925151881133,0,3.80615036115011,5.44561437714983,0.766371165625774,0.359445373517761,0,0.127070227073065,3.59497534571574,3.20250421973039,9.42407640846483,5.73620256634512,3.83573185995496,5.61027720310812,5.67844420737152,10.6931332042832,2.73695335342205,2.0217820674694,6.10281382070775,5.59517904739626,7.58676944630461,5.94205028357652,6.63101198477146,9.66118287948856,7.04625461566674,10.9631017734883,5.43277078551933,6.03590380211958,10.7790465695657,9.32540958068929,8.76782929710299,6.67313398141435,6.61679116392116,4.32142486456681,12.1410902759281,0,0,0,4.76389276831654,4.92504725960302,7.74266864282364,7.33908680314152,9.44468312387538,4.78228049950873,6.51095045301142,5.633741429392,6.77238985729583,6.7469538464527,6.23836363500562,4.78305976320549,5.11699955988663,4.83010253640311,4.96563749413376,7.78072809687271,13.6863134464448,0,0.264450566663544,9.38468302355029,11.147360249301,5.92790322081629,5.84882221407693,4.22518283305254,2.85338439168839,1.42358718463353,3.78807595865225,1.50801125280162,4.17808591286417,4.09424582950152,0.898819408654221,1.08069024937347,0.398282546508734,5.50036912763937,6.51216521875454,5.63538678365402,8.14605311381257,9.89157684554891,7.50453272826409,6.63983639804701,3.54264355151045,2.511979645462,1.48076596706161,0.296452627087149,1.00107063429656,3.34150291692445,1.12431056192427,1.01430060694251,0.964708639009667,1.52775511068852,1.43848068725405,1.45921704097532,3.0201755450689,0,3.72140947668503,1.87222603868736,2.77836765741823,1.61457672169721,1.92977408545347,4.0645701836653,4.73728529426212,5.54080919902888,9.33597971763535,8.21415869009757,7.37027532743989,10.2358765580986,7.80534591431195,8.82756806994669,7.30833475840957,10.2051051940792,4.91589944147214,6.56202931090403,4.91806799177139,0,0,2.95058563811422,4.69092468718045,3.37156238974363,5.39173758324135,1.96721934452011,5.04941854408746,6.31016438832513,6.24701990874622,6.46270193198397,8.36390792833932,6.23836287430704,9.34152551603147,7.69140333182299,6.72188473196017,6.32460444714438,10.9249247583414,6.24536374916382,9.08134578703002,12.7051828295789,7.58862565673663,0,7.52619972080442,4.23252979750651,3.20628635585027,3.54362271456927,3.99665692327106,6.20227903603731,4.36240475373007,4.27796854061666,2.84433082142234,1.05418608574999,2.06271086496374,4.08527526904546,9.00305470156551,7.89087971074802,10.502514716548,7.80297028026004,10.3453914209201,7.56925494769756,7.30715877875038,1.17335854031855,4.44847348814022,0.220528398054962,2.63818004706368,4.52100394748536,4.34253059482722,3.70054266409723,4.26766339337159,2.04036585640896,2.22510362412612,0.683483523191411,6.81076664278634,5.18544676635193,0.941842285023455,0.410082683163076,1.60144721244566,1.69978429993855,1.53946597556024,1.65839968565309,0.954670618015114,9.64824780422463,8.13277868507395,6.26430976766447,5.22720740036172,6.11415178489297,5.79916689454729,7.43881101528023,2.35580347785627,2.46268449254406,3.72803587852155,1.12738587736838,8.67195967055077,8.27292452285488,7.97249872210595,6.58715099736429,7.94093789806657,7.86293498926552,8.46328501485676,6.92071673209692,3.38217769156408,3.74439008135225,0,2.02725215290164,2.67048488628551,0.77952493786677,1.25318686967237,0.596044064343795,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,3.17422537061296,2.66383144048878,1.16628013592318,0.839423081820392,7.14801497919105,2.064507229963,5.86085197655248,5.35920947697665,2.00628841614145,5.64751842617067,3.22227665555024,4.01026859407578,5.67115501734169,7.53590771747707,5.2877572817279,6.07520250208625,2.2516060161211,6.34399372577886,2.07104124700728,5.29315472679301,9.17757208822371,6.31714341290296,6.56388136084394,4.40187641518763,7.16989682955055,6.88964856185007,4.12070114477788,4.49286893428541,6.31743029409494,4.30914809813408,6.79054828989874,5.80577346313271,7.23484222175023,6.31790158511746,8.57328644309533,7.06894388263618,8.10218725947561,5.35711671044299,6.32955356577908,3.42869252385415,5.6792257970988,6.43777712857767,5.52316383202848,6.68176600948847,6.76916863133412,5.48783918618318,6.05060336307039,5.29636043998861,6.73370725989286,6.52492599682958,7.09232273104057,4.91077251803627,6.8172210121825,5.20847849649082,6.49507502638659,4.67863216890817,6.44613162144895,5.92993829413414,2.64709702943419,3.70988536992674 | ||
|short_description=p@chr18:65740410..65740452,+ | |short_description=p@chr18:65740410..65740452,+ | ||
}} | }} |
Latest revision as of 01:12, 6 August 2015
Short description: | p@chr18:65740410..65740452, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:65740410..65740452, + |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.81e-08 | 33 |
neuronal stem cell | 3.81e-08 | 33 |
neuroblast | 3.81e-08 | 33 |
electrically signaling cell | 3.81e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.99e-12 | 92 |
neurectoderm | 1.39e-10 | 64 |
neural plate | 1.39e-10 | 64 |
presumptive neural plate | 1.39e-10 | 64 |
pre-chordal neural plate | 6.64e-10 | 49 |
ectoderm-derived structure | 7.36e-10 | 95 |
ectoderm | 7.36e-10 | 95 |
presumptive ectoderm | 7.36e-10 | 95 |
ecto-epithelium | 8.11e-10 | 73 |
central nervous system | 2.42e-09 | 73 |
nervous system | 5.15e-09 | 75 |
regional part of nervous system | 6.03e-08 | 54 |
regional part of forebrain | 6.71e-08 | 39 |
forebrain | 6.71e-08 | 39 |
future forebrain | 6.71e-08 | 39 |
neural tube | 7.58e-08 | 52 |
neural rod | 7.58e-08 | 52 |
future spinal cord | 7.58e-08 | 52 |
neural keel | 7.58e-08 | 52 |
anterior neural tube | 1.08e-07 | 40 |
embryo | 1.12e-07 | 320 |
brain | 1.69e-07 | 47 |
future brain | 1.69e-07 | 47 |
regional part of brain | 5.06e-07 | 46 |