FFCP PHASE1:Mm9::chr2:73367602..73367626,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215280 | |EntrezGene=215280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENSMUST00000143061_5end | |association_with_transcript=-66bp_to_ENSMUST00000143061_5end | ||
|cluster_id=chr2:73367602..73367626,- | |||
|description=CAGE_peak_13_at_Wipf1_5end | |description=CAGE_peak_13_at_Wipf1_5end | ||
|id=chr2:73367602..73367626,- | |id=chr2:73367602..73367626,- | ||
|ontology_enrichment_celltype=CL:0002563!5.67e-08!9;CL:0002251!5.67e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.39e-17,9;CL:0002251,2.39e-17,9;CL:0000239,1.09e-15,6;CL:0000677,1.09e-15,6;CL:0000584,1.09e-15,6;CL:0000075,2.42e-13,7;CL:0002076,1.47e-12,15;CL:0000066,1.86e-12,25;CL:0000223,5.30e-09,20;CL:0000682,3.36e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.81e-15!43;UBERON:0005409!1.74e-13!59;UBERON:0000344!1.16e-12!15;UBERON:0001242!3.76e-11!13;UBERON:0000060!3.76e-11!13;UBERON:0001262!3.76e-11!13;UBERON:0004786!3.76e-11!13;UBERON:0004923!1.18e-08!24;UBERON:0003350!5.67e-08!9;UBERON:0004808!5.67e-08!9;UBERON:0001277!5.67e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.54e-55,31;UBERON:0005409,2.17e-37,47;UBERON:0000344,2.64e-31,15;UBERON:0001242,8.94e-27,13;UBERON:0001262,8.94e-27,13;UBERON:0004786,8.94e-27,13;UBERON:0004923,2.32e-18,24;UBERON:0003350,2.39e-17,9;UBERON:0004808,2.39e-17,9;UBERON:0001277,2.39e-17,9;UBERON:0001007,3.54e-15,116;UBERON:0001555,3.54e-15,116;UBERON:0007026,3.54e-15,116;UBERON:0004119,8.27e-15,118;UBERON:0000925,8.27e-15,118;UBERON:0006595,8.27e-15,118;UBERON:0000485,6.04e-14,11;UBERON:0004921,5.06e-13,114;UBERON:0002108,9.97e-11,4;UBERON:0000331,2.12e-08,3;UBERON:0002116,2.12e-08,3;UBERON:0001204,2.12e-08,3;UBERON:0001168,2.12e-08,3 | |||
|phase1_expression=0,8.02643437570531,4.54999239389536,11.1911758183527,12.0214975187123,2.18243053485457,3.27057696833736,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0,0,3.83981814704176,3.44113921600755,5.16808767703518,3.4460959692726,2.58565479223067,4.75058548640935,7.30887376303799,2.66076612786366,0,0,0,2.88851619751275,1.99481574430191,0.408338712524738,0,2.3440060335714,0,0,0,0,0,0.506884656097573,0.183546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,0.604572480854284,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0,0,5.09610479413291,0,0,0.253359865475099,0,1.94112595522402,0.517875767294343,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0,0,3.72783522436244,0,0,7.91916871146633,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0,0,0,11.5646574044329,9.25576983322405,0.213288250535234,0,0.38660238396628,1.21010114774006,2.66853652613844,2.28270751335071,7.59246498471219,2.47048432086016,3.51869292320377,1.39269530428806,1.9496408711912,11.6846523125049,7.5648317456143,7.16908583715722,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0,0,4.95517422270746,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0,0,2.46268449254406,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.384150914429216,0.229741875822453,0,0.579421629724277,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,8.02643437570531,4.54999239389536,11.1911758183527,12.0214975187123,2.18243053485457,3.27057696833736,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0,0,3.83981814704176,3.44113921600755,5.16808767703518,3.4460959692726,2.58565479223067,4.75058548640935,7.30887376303799,2.66076612786366,0,0,0,2.88851619751275,1.99481574430191,0.408338712524738,0,2.3440060335714,0,0,0,0,0,0.506884656097573,0.183546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,0.604572480854284,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0,0,5.09610479413291,0,0,0.253359865475099,0,1.94112595522402,0.517875767294343,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0,0,3.72783522436244,0,0,7.91916871146633,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0,0,0,11.5646574044329,9.25576983322405,0.213288250535234,0,0.38660238396628,1.21010114774006,2.66853652613844,2.28270751335071,7.59246498471219,2.47048432086016,3.51869292320377,1.39269530428806,1.9496408711912,11.6846523125049,7.5648317456143,7.16908583715722,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0,0,4.95517422270746,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0,0,2.46268449254406,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.384150914429216,0.229741875822453,0,0.579421629724277,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p13@Wipf1 | |short_description=p13@Wipf1 | ||
}} | }} |
Latest revision as of 23:08, 26 September 2015
Short description: | p13@Wipf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Wipf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -66bp_to_ENSMUST00000143061_5end |
EntrezGene: | Wipf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.39e-17 | 9 |
epithelial cell of alimentary canal | 2.39e-17 | 9 |
brush border epithelial cell | 1.09e-15 | 6 |
gut absorptive cell | 1.09e-15 | 6 |
enterocyte | 1.09e-15 | 6 |
columnar/cuboidal epithelial cell | 2.42e-13 | 7 |
endo-epithelial cell | 1.47e-12 | 15 |
epithelial cell | 1.86e-12 | 25 |
endodermal cell | 5.30e-09 | 20 |
M cell of gut | 3.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.54e-55 | 31 |
gastrointestinal system | 2.17e-37 | 47 |
mucosa | 2.64e-31 | 15 |
intestinal mucosa | 8.94e-27 | 13 |
wall of intestine | 8.94e-27 | 13 |
gastrointestinal system mucosa | 8.94e-27 | 13 |
organ component layer | 2.32e-18 | 24 |
epithelium of mucosa | 2.39e-17 | 9 |
gastrointestinal system epithelium | 2.39e-17 | 9 |
intestinal epithelium | 2.39e-17 | 9 |
digestive system | 3.54e-15 | 116 |
digestive tract | 3.54e-15 | 116 |
primitive gut | 3.54e-15 | 116 |
endoderm-derived structure | 8.27e-15 | 118 |
endoderm | 8.27e-15 | 118 |
presumptive endoderm | 8.27e-15 | 118 |
simple columnar epithelium | 6.04e-14 | 11 |
subdivision of digestive tract | 5.06e-13 | 114 |
small intestine | 9.97e-11 | 4 |
ileal mucosa | 2.12e-08 | 3 |
ileum | 2.12e-08 | 3 |
mucosa of small intestine | 2.12e-08 | 3 |
wall of small intestine | 2.12e-08 | 3 |