FFCP PHASE1:Mm9::chr2:78708882..78708913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22193 | |EntrezGene=22193 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P52483,B1AWL1,D3YW10 | |UniProt=P52483,B1AWL1,D3YW10 | ||
|association_with_transcript=-290bp_to_ENSMUST00000028398,NM_009454,uc008kgm.1,uc008kgn.1_5end | |association_with_transcript=-290bp_to_ENSMUST00000028398,NM_009454,uc008kgm.1,uc008kgn.1_5end | ||
|cluster_id=chr2:78708882..78708913,+ | |||
|description=CAGE_peak_3_at_Ube2e3_5end | |description=CAGE_peak_3_at_Ube2e3_5end | ||
|id=chr2:78708882..78708913,+ | |id=chr2:78708882..78708913,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.58e-09!43;CL:0000221!9.01e-09!44;CL:0000133!9.01e-09!44;CL:0000540!2.26e-08!33;CL:0000047!2.26e-08!33;CL:0000031!2.26e-08!33;CL:0000404!2.26e-08!33;CL:0000055!1.13e-07!50;CL:0000107!3.76e-07!9;CL:0000393!4.65e-07!39;CL:0000211!4.65e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.58e-09,43;CL:0000221,9.01e-09,44;CL:0000133,9.01e-09,44;CL:0000540,2.26e-08,33;CL:0000047,2.26e-08,33;CL:0000031,2.26e-08,33;CL:0000404,2.26e-08,33;CL:0000107,3.76e-07,9;CL:0000393,4.65e-07,39;CL:0000211,4.65e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.76e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.76e-07,9 | |||
|phase1_expression=3.68342348341026,2.09385244583617,1.81999695755814,3.93203474698879,10.0179145989269,1.6787927191189,4.67225281191051,2.45334314538995,16.1907030474417,8.42632294759177,2.22583358693156,2.15384829287408,3.25281386869291,1.39872643870396,15.6561588053361,10.3262386368811,29.3815988813822,6.46697438984387,4.9361196098066,3.81950686618227,3.57181818634493,10.9220046320974,8.35839325244593,3.19984845586813,5.27641346454491,1.72269589234506,1.7230479846363,2.37018355954478,2.66032787238923,1.00812051903972,0.665191531965914,22.2260735710871,13.5314253268605,0,4.62162591602039,2.32728503501889,3.26670970019791,1.25559489221072,3.1253413780952,0.523523743973798,1.17646297606203,2.04913645487534,1.45653105909346,4.40638862914521,4.46058497365864,3.30384153891027,21.1245662973971,12.4274339136855,11.8630538676615,8.55491555926847,9.79904951377538,7.18762821824858,6.87908684836719,8.70434570413613,9.74672017513146,11.5766746216176,8.02293631828519,10.8291139378263,15.7806839470486,15.869729378161,20.9164363157039,12.876092218627,16.0073063300005,4.04954872776629,4.94433181283487,4.9733608046227,13.4820049733282,11.1423308543251,6.42875596312561,10.1254453748768,9.25429829946081,10.8547374073445,9.05561017901615,9.30930074033651,10.7346927540425,12.8690630125403,4.40463523997555,9.44886301830389,10.4452442614246,16.0901271030836,18.5719916512892,19.2737947106001,5.58365998002762,3.93933827022176,6.26472815884921,11.7851434189467,13.3829379951157,13.2343606535963,2.87759534666099,7.70829913089212,6.66688324013859,4.30211938490693,11.5595126730318,3.77792234146472,4.54843492213368,4.92829575807069,4.0728881838208,6.81721290312231,6.49465011507172,5.3000936176551,4.3661460130771,6.41632387071589,12.7402619853323,14.2213340630666,5.41227602528035,5.82727690592727,9.60496445528088,5.93756174539112,1.55362730188303,6.08612770165782,9.02123699183906,5.48037860961854,6.45723392316964,5.87818298155228,7.64326596382081,3.39299796590124,5.6854842578906,4.19338135067744,9.73071607144862,7.60304194752823,9.27534377533653,6.78825354389311,3.72783522436244,6.14839673724249,14.4518227701284,4.08731288333746,12.7004031976275,5.39912457894067,6.86179226194549,4.49371918214468,2.28750301409313,3.5183218591602,2.9550134432687,5.62574006126727,4.77912502486988,7.30085683804909,10.0820970211813,6.22034853050465,3.0326731012041,3.78795340595653,9.36867189331467,14.0240283704418,16.2055916824814,9.34369870581433,12.5867523429957,9.73664274164858,8.99536555773397,3.88055056108524,17.6765754204931,11.3463648100692,11.7887253189846,11.1789823538063,5.28289773528636,7.3132954969655,3.49829631893504,14.131432944113,5.61770549850588,3.3455227924913,9.94572247884574,15.9486844852336,8.44293815931946,10.0834754418168,16.0986420197943,12.199382368339,11.415766353666,11.8592311822708,10.9992094573844,14.2453717687947,8.06343264576054,11.1633875573785,7.21512404958116,4.38599962275997,7.68425403518677,6.97873377553933,4.20579897128254,5.14523061896422,1.98251269790279,6.34681359992506,8.74481827194459,10.9151235774406,8.63411990858025,9.68080918192044,8.45036566610507,8.17970192284004,4.2707615539006,5.92916237006439,5.02670417600539,4.97391180102877,3.8992817423824,1.79763881730844,2.16138049874694,3.38540164532424,14.035424670528,9.59687505921722,16.9061603509621,9.77526373657508,9.69762435838129,11.5022744620122,7.58838445491087,3.39503340353085,6.43694784149637,3.94870924549762,4.44678940630723,17.0182007830416,15.3316016188298,21.3619006765611,15.8230894683032,13.7470981058878,9.42115651591253,6.90470729881945,8.59316701907687,4.66754402419738,28.7536413054709,5.95425516269605,3.43241440426017,2.77836765741823,1.4351793081753,2.41221760681684,3.8798169934987,10.6115190591471,13.3631280682461,9.16623463186016,7.97946844180907,8.04030035720716,9.52174563544055,12.6836871107569,7.09358148477859,8.19419351700467,5.58091690301205,5.07976275618788,5.87128938344045,5.64131328467895,15.0791283939272,3.80733978673097,1.96705709207614,5.79467167239938,6.58257418949947,5.74337264301796,3.77050374366353,3.53459298086122,21.7700671397217,19.9123759591286,19.1726823982191,24.3748173911603,19.1606859710859,27.4584234865167,29.1463705205924,22.2114452012597,18.9738133414331,8.67567554338879,6.38730383437209,7.83488656135923,14.4969393824683,8.41347627159931,2.65490276679926,6.5550771761845,9.06970670894253,3.39489143560617,6.496641643377,4.91896236710284,8.26970538138308,8.36127577798263,4.27796854061666,3.79244109522979,0,1.03135543248187,8.85142974959849,11.3438489239725,8.5376731296618,14.1462443120851,15.4286003268778,9.27517851530767,10.3665882979336,7.30715877875038,14.54964589995,12.4980921809654,4.6310963591542,4.122156323537,7.91175690809937,4.70440814439616,5.72987251215055,4.26766339337159,3.49777003955821,5.93360966433631,13.3279287022325,8.46186158649212,8.70414278637645,13.3741604473331,6.01454601972511,12.8115776995653,25.6667429290722,24.4915041566402,23.2175955991432,5.72802370809068,15.8167996790568,9.55601495496189,5.94029374519907,5.64538399239065,5.67742665740062,6.06889558731693,5.70308844504818,2.87931536182433,6.22151871800606,1.24267862617385,13.5286305284206,11.0642244072544,8.60384150376908,12.250424865675,6.71631082084202,9.12363077650202,10.0927225235348,13.150642869239,19.0844006854794,17.6356408202984,13.8254403003775,8.53230025696081,8.91990947276722,5.75181360123033,6.36612032591196,11.9947886097213,7.54989148168807,5.4087952283986,7.82754494025259,5.14928894735553,6.47757856567499,4.13387359061046,5.65255708290564,6.25376970662141,6.778860326531,4.53460767230423,5.54964883435162,7.53596395519596,6.37961542183498,5.9888774149979,3.94133198447482,7.69236821922513,3.85863082342319,2.50786052017682,9.60078132449013,6.90487854760765,5.72895513439397,6.70227411140382,4.11049511862385,3.7769694869485,2.70009000092722,3.60256962579376,4.53142408984205,4.14208249401456,14.2188666190322,19.1531939232495,7.85374586469017,13.3708694387562,9.22297915563122,8.08911437180062,6.88964856185007,6.79915688888351,5.45562656306086,5.55933865880354,7.60437899670719,5.84741658296836,7.39767909012071,6.78666615491614,6.77738533676237,5.23923060411381,8.11190281613988,5.59436739344745,5.35711671044299,5.2991611248383,7.20025430009372,5.14679837862079,4.5302876089991,5.81385666529314,6.30532848782715,6.8537832392258,7.50004688778368,5.5244639401947,5.56796866768033,8.41713407486608,4.86403574309114,5.81176446015824,8.18462086339379,6.04253680625267,9.06661071611365,10.2422336954558,7.25187986180766,6.66100267549725,11.8598765882683,11.6913452133343,4.40548887678801 | |phase1_expression=3.68342348341026,2.09385244583617,1.81999695755814,3.93203474698879,10.0179145989269,1.6787927191189,4.67225281191051,2.45334314538995,16.1907030474417,8.42632294759177,2.22583358693156,2.15384829287408,3.25281386869291,1.39872643870396,15.6561588053361,10.3262386368811,29.3815988813822,6.46697438984387,4.9361196098066,3.81950686618227,3.57181818634493,10.9220046320974,8.35839325244593,3.19984845586813,5.27641346454491,1.72269589234506,1.7230479846363,2.37018355954478,2.66032787238923,1.00812051903972,0.665191531965914,22.2260735710871,13.5314253268605,0,4.62162591602039,2.32728503501889,3.26670970019791,1.25559489221072,3.1253413780952,0.523523743973798,1.17646297606203,2.04913645487534,1.45653105909346,4.40638862914521,4.46058497365864,3.30384153891027,21.1245662973971,12.4274339136855,11.8630538676615,8.55491555926847,9.79904951377538,7.18762821824858,6.87908684836719,8.70434570413613,9.74672017513146,11.5766746216176,8.02293631828519,10.8291139378263,15.7806839470486,15.869729378161,20.9164363157039,12.876092218627,16.0073063300005,4.04954872776629,4.94433181283487,4.9733608046227,13.4820049733282,11.1423308543251,6.42875596312561,10.1254453748768,9.25429829946081,10.8547374073445,9.05561017901615,9.30930074033651,10.7346927540425,12.8690630125403,4.40463523997555,9.44886301830389,10.4452442614246,16.0901271030836,18.5719916512892,19.2737947106001,5.58365998002762,3.93933827022176,6.26472815884921,11.7851434189467,13.3829379951157,13.2343606535963,2.87759534666099,7.70829913089212,6.66688324013859,4.30211938490693,11.5595126730318,3.77792234146472,4.54843492213368,4.92829575807069,4.0728881838208,6.81721290312231,6.49465011507172,5.3000936176551,4.3661460130771,6.41632387071589,12.7402619853323,14.2213340630666,5.41227602528035,5.82727690592727,9.60496445528088,5.93756174539112,1.55362730188303,6.08612770165782,9.02123699183906,5.48037860961854,6.45723392316964,5.87818298155228,7.64326596382081,3.39299796590124,5.6854842578906,4.19338135067744,9.73071607144862,7.60304194752823,9.27534377533653,6.78825354389311,3.72783522436244,6.14839673724249,14.4518227701284,4.08731288333746,12.7004031976275,5.39912457894067,6.86179226194549,4.49371918214468,2.28750301409313,3.5183218591602,2.9550134432687,5.62574006126727,4.77912502486988,7.30085683804909,10.0820970211813,6.22034853050465,3.0326731012041,3.78795340595653,9.36867189331467,14.0240283704418,16.2055916824814,9.34369870581433,12.5867523429957,9.73664274164858,8.99536555773397,3.88055056108524,17.6765754204931,11.3463648100692,11.7887253189846,11.1789823538063,5.28289773528636,7.3132954969655,3.49829631893504,14.131432944113,5.61770549850588,3.3455227924913,9.94572247884574,15.9486844852336,8.44293815931946,10.0834754418168,16.0986420197943,12.199382368339,11.415766353666,11.8592311822708,10.9992094573844,14.2453717687947,8.06343264576054,11.1633875573785,7.21512404958116,4.38599962275997,7.68425403518677,6.97873377553933,4.20579897128254,5.14523061896422,1.98251269790279,6.34681359992506,8.74481827194459,10.9151235774406,8.63411990858025,9.68080918192044,8.45036566610507,8.17970192284004,4.2707615539006,5.92916237006439,5.02670417600539,4.97391180102877,3.8992817423824,1.79763881730844,2.16138049874694,3.38540164532424,14.035424670528,9.59687505921722,16.9061603509621,9.77526373657508,9.69762435838129,11.5022744620122,7.58838445491087,3.39503340353085,6.43694784149637,3.94870924549762,4.44678940630723,17.0182007830416,15.3316016188298,21.3619006765611,15.8230894683032,13.7470981058878,9.42115651591253,6.90470729881945,8.59316701907687,4.66754402419738,28.7536413054709,5.95425516269605,3.43241440426017,2.77836765741823,1.4351793081753,2.41221760681684,3.8798169934987,10.6115190591471,13.3631280682461,9.16623463186016,7.97946844180907,8.04030035720716,9.52174563544055,12.6836871107569,7.09358148477859,8.19419351700467,5.58091690301205,5.07976275618788,5.87128938344045,5.64131328467895,15.0791283939272,3.80733978673097,1.96705709207614,5.79467167239938,6.58257418949947,5.74337264301796,3.77050374366353,3.53459298086122,21.7700671397217,19.9123759591286,19.1726823982191,24.3748173911603,19.1606859710859,27.4584234865167,29.1463705205924,22.2114452012597,18.9738133414331,8.67567554338879,6.38730383437209,7.83488656135923,14.4969393824683,8.41347627159931,2.65490276679926,6.5550771761845,9.06970670894253,3.39489143560617,6.496641643377,4.91896236710284,8.26970538138308,8.36127577798263,4.27796854061666,3.79244109522979,0,1.03135543248187,8.85142974959849,11.3438489239725,8.5376731296618,14.1462443120851,15.4286003268778,9.27517851530767,10.3665882979336,7.30715877875038,14.54964589995,12.4980921809654,4.6310963591542,4.122156323537,7.91175690809937,4.70440814439616,5.72987251215055,4.26766339337159,3.49777003955821,5.93360966433631,13.3279287022325,8.46186158649212,8.70414278637645,13.3741604473331,6.01454601972511,12.8115776995653,25.6667429290722,24.4915041566402,23.2175955991432,5.72802370809068,15.8167996790568,9.55601495496189,5.94029374519907,5.64538399239065,5.67742665740062,6.06889558731693,5.70308844504818,2.87931536182433,6.22151871800606,1.24267862617385,13.5286305284206,11.0642244072544,8.60384150376908,12.250424865675,6.71631082084202,9.12363077650202,10.0927225235348,13.150642869239,19.0844006854794,17.6356408202984,13.8254403003775,8.53230025696081,8.91990947276722,5.75181360123033,6.36612032591196,11.9947886097213,7.54989148168807,5.4087952283986,7.82754494025259,5.14928894735553,6.47757856567499,4.13387359061046,5.65255708290564,6.25376970662141,6.778860326531,4.53460767230423,5.54964883435162,7.53596395519596,6.37961542183498,5.9888774149979,3.94133198447482,7.69236821922513,3.85863082342319,2.50786052017682,9.60078132449013,6.90487854760765,5.72895513439397,6.70227411140382,4.11049511862385,3.7769694869485,2.70009000092722,3.60256962579376,4.53142408984205,4.14208249401456,14.2188666190322,19.1531939232495,7.85374586469017,13.3708694387562,9.22297915563122,8.08911437180062,6.88964856185007,6.79915688888351,5.45562656306086,5.55933865880354,7.60437899670719,5.84741658296836,7.39767909012071,6.78666615491614,6.77738533676237,5.23923060411381,8.11190281613988,5.59436739344745,5.35711671044299,5.2991611248383,7.20025430009372,5.14679837862079,4.5302876089991,5.81385666529314,6.30532848782715,6.8537832392258,7.50004688778368,5.5244639401947,5.56796866768033,8.41713407486608,4.86403574309114,5.81176446015824,8.18462086339379,6.04253680625267,9.06661071611365,10.2422336954558,7.25187986180766,6.66100267549725,11.8598765882683,11.6913452133343,4.40548887678801 | ||
|short_description=p3@Ube2e3 | |short_description=p3@Ube2e3 | ||
}} | }} |
Latest revision as of 00:38, 27 September 2015
Short description: | p3@Ube2e3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ube2e3_5end |
Coexpression cluster: | NA |
Association with transcript: | -290bp_to_ENSMUST00000028398, NM_009454, uc008kgm.1, uc008kgn.1_5end |
EntrezGene: | Ube2e3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.58e-09 | 43 |
ectodermal cell | 9.01e-09 | 44 |
neurectodermal cell | 9.01e-09 | 44 |
neuron | 2.26e-08 | 33 |
neuronal stem cell | 2.26e-08 | 33 |
neuroblast | 2.26e-08 | 33 |
electrically signaling cell | 2.26e-08 | 33 |
autonomic neuron | 3.76e-07 | 9 |
electrically responsive cell | 4.65e-07 | 39 |
electrically active cell | 4.65e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.76e-07 | 9 |