FFCP PHASE1:Mm9::chr2:79294856..79294867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=403 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:79294856..79294867,- | |||
|description=CAGE_peak_at_chr2:79294856..79294867,- | |description=CAGE_peak_at_chr2:79294856..79294867,- | ||
|id=chr2:79294856..79294867,- | |id=chr2:79294856..79294867,- | ||
|ontology_enrichment_celltype=CL:0000117!3.29e-14!23;CL:0000337!3.29e-14!23;CL:0000540!2.73e-08!33;CL:0000047!2.73e-08!33;CL:0000031!2.73e-08!33;CL:0000404!2.73e-08!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.85e-25!49;UBERON:0000033!1.02e-23!63;UBERON:0002346!1.50e-23!71;UBERON:0003075!1.50e-23!71;UBERON:0007284!1.50e-23!71;UBERON:0001049!7.19e-20!52;UBERON:0005068!7.19e-20!52;UBERON:0006241!7.19e-20!52;UBERON:0007135!7.19e-20!52;UBERON:0002020!1.14e-17!34;UBERON:0002616!2.10e-17!49;UBERON:0004121!3.60e-17!102;UBERON:0000924!3.60e-17!102;UBERON:0006601!3.60e-17!102;UBERON:0000955!7.34e-17!50;UBERON:0006238!7.34e-17!50;UBERON:0001017!2.55e-16!73;UBERON:0005743!2.55e-16!73;UBERON:0000073!1.43e-15!75;UBERON:0001016!1.43e-15!75;UBERON:0003080!1.50e-15!40;UBERON:0002780!9.78e-15!39;UBERON:0001890!9.78e-15!39;UBERON:0006240!9.78e-15!39;UBERON:0007811!4.76e-14!86;UBERON:0002791!6.98e-14!29;UBERON:0003528!6.98e-14!29;UBERON:0001893!6.98e-14!29;UBERON:0000956!8.49e-14!21;UBERON:0001869!8.49e-14!21;UBERON:0000203!8.49e-14!21;UBERON:0000153!9.60e-13!94;UBERON:0000970!9.09e-12!9;UBERON:0000019!9.09e-12!9;UBERON:0000047!9.09e-12!9;UBERON:0004088!9.09e-12!9;UBERON:0002104!9.09e-12!9;UBERON:0001456!9.09e-12!9;UBERON:0003072!9.09e-12!9;UBERON:0003071!9.09e-12!9;UBERON:0004128!9.09e-12!9;UBERON:0002619!1.58e-09!17;UBERON:0001444!3.55e-09!11;UBERON:0002021!2.94e-08!10;UBERON:0000411!2.94e-08!10;UBERON:0001950!2.94e-08!10;UBERON:0000020!3.28e-08!12;UBERON:0001032!3.28e-08!12;UBERON:0004456!3.28e-08!12;UBERON:0005085!2.13e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.99e-29,9;UBERON:0000019,3.99e-29,9;UBERON:0000047,3.99e-29,9;UBERON:0010312,3.99e-29,9;UBERON:0004088,3.99e-29,9;UBERON:0002104,3.99e-29,9;UBERON:0001456,3.99e-29,9;UBERON:0003072,3.99e-29,9;UBERON:0004128,3.99e-29,9;UBERON:0003071,3.99e-29,9;UBERON:0001444,8.05e-24,11;UBERON:0000020,7.90e-22,12;UBERON:0001032,7.90e-22,12;UBERON:0004456,7.90e-22,12;UBERON:0000033,3.84e-20,13;UBERON:0005085,3.84e-20,13;UBERON:0002346,1.23e-15,64;UBERON:0003075,1.23e-15,64;UBERON:0007284,1.23e-15,64;UBERON:0003056,4.92e-14,49;UBERON:0010371,1.35e-13,73;UBERON:0010314,1.38e-10,92;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002037,1.14e-08,4;UBERON:0002680,1.14e-08,4;UBERON:0001895,1.14e-08,4;UBERON:0010092,1.14e-08,4;UBERON:0006215,1.14e-08,4;UBERON:0007811,3.95e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,6.70229461803056,0,0,0,0,0.299581278809645,0,0,0.521472960576829,0.255715457330331,0,0,0,0,0,1.47309299120532,0.130120442962704,0.229902104433473,0.720248519221397,1.20563854268572,1.42876648217788,3.71529788826064,3.5606655332697,2.84573707812917,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.9551876352064,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.709360934569094,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,6.70229461803056,0,0,0,0,0.299581278809645,0,0,0.521472960576829,0.255715457330331,0,0,0,0,0,1.47309299120532,0.130120442962704,0.229902104433473,0.720248519221397,1.20563854268572,1.42876648217788,3.71529788826064,3.5606655332697,2.84573707812917,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.9551876352064,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.709360934569094,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr2:79294856..79294867,- | |short_description=p@chr2:79294856..79294867,- | ||
}} | }} |
Latest revision as of 13:13, 5 August 2015
Short description: | p@chr2:79294856..79294867, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79294856..79294867, - |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.99e-29 | 9 |
camera-type eye | 3.99e-29 | 9 |
simple eye | 3.99e-29 | 9 |
immature eye | 3.99e-29 | 9 |
ocular region | 3.99e-29 | 9 |
visual system | 3.99e-29 | 9 |
face | 3.99e-29 | 9 |
optic cup | 3.99e-29 | 9 |
optic vesicle | 3.99e-29 | 9 |
eye primordium | 3.99e-29 | 9 |
subdivision of head | 8.05e-24 | 11 |
sense organ | 7.90e-22 | 12 |
sensory system | 7.90e-22 | 12 |
entire sense organ system | 7.90e-22 | 12 |
head | 3.84e-20 | 13 |
ectodermal placode | 3.84e-20 | 13 |
neurectoderm | 1.23e-15 | 64 |
neural plate | 1.23e-15 | 64 |
presumptive neural plate | 1.23e-15 | 64 |
pre-chordal neural plate | 4.92e-14 | 49 |
ecto-epithelium | 1.35e-13 | 73 |
structure with developmental contribution from neural crest | 1.38e-10 | 92 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
cerebellum | 1.14e-08 | 4 |
regional part of metencephalon | 1.14e-08 | 4 |
metencephalon | 1.14e-08 | 4 |
future metencephalon | 1.14e-08 | 4 |
rhombic lip | 1.14e-08 | 4 |
craniocervical region | 3.95e-07 | 36 |