FFCP PHASE1:Hg19::chr12:7079780..7079791,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11331 | |EntrezGene=11331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30306 | |HGNC=30306 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3X6 | |UniProt=F5H3X6 | ||
|association_with_transcript=13bp_to_ENST00000536316_5end | |association_with_transcript=13bp_to_ENST00000536316_5end | ||
|cluster_id=chr12:7079780..7079791,- | |||
|description=CAGE_peak_2_at_PHB2_5end | |description=CAGE_peak_2_at_PHB2_5end | ||
|id=chr12:7079780..7079791,- | |id=chr12:7079780..7079791,- | ||
|ontology_enrichment_celltype=CL:0000066!3.33e-41!254;CL:0002321!6.43e-29!248;CL:0000220!7.64e-28!246;CL:0000548!1.17e-26!679;CL:0000004!1.17e-26!679;CL:0000255!1.17e-26!679;CL:0000012!6.73e-26!682;CL:0000076!9.35e-12!62;CL:0000003!2.03e-11!722;CL:0000144!2.80e-11!625;CL:0000223!6.67e-11!59;CL:0000222!4.02e-10!119;CL:0000063!4.10e-10!578;CL:0000055!1.20e-07!180;CL:0002076!1.50e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.33e-41!254;CL:0002321!6.43e-29!248;CL:0000220!7.64e-28!246;CL:0000548!1.17e-26!679;CL:0000004!1.17e-26!679;CL:0000255!1.17e-26!679;CL:0000012!6.73e-26!682;CL:0000076!9.35e-12!62;CL:0000003!2.03e-11!722;CL:0000144!2.80e-11!625;CL:0000223!6.67e-11!59;CL:0000222!4.02e-10!119;CL:0000063!4.10e-10!578;CL:0000055!1.20e-07!180;CL:0002076!1.50e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.79e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.17e-42,253;CL:0002321,6.17e-29,250;CL:0000076,6.18e-12,63;CL:0000223,7.30e-11,58;CL:0000222,4.97e-10,121;CL:0002076,1.73e-07,42;CL:1000449,5.44e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.56e-24!239;DOID:162!3.57e-24!235;DOID:305!3.76e-18!106;DOID:0050687!1.91e-17!143;DOID:0050686!1.13e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.56e-24,239;DOID:162,6.39e-24,235;DOID:305,3.79e-18,106;DOID:0050687,2.60e-17,143;DOID:0050686,1.48e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!5.06e-15!238;UBERON:0009142!5.06e-15!238;UBERON:0002100!8.80e-11!216;UBERON:0000490!9.40e-11!138;UBERON:0003914!1.71e-10!118;UBERON:0005256!1.03e-09!143;UBERON:0009569!5.66e-09!113;UBERON:0001048!8.40e-09!168;UBERON:0001041!2.36e-08!98;UBERON:0000466!3.61e-08!126;UBERON:0000481!4.83e-08!347;UBERON:0005177!8.61e-08!107;UBERON:0000119!1.17e-07!312;UBERON:0000077!2.27e-07!130;UBERON:0000483!2.64e-07!309;UBERON:0000072!5.68e-07!46;UBERON:0004119!6.28e-07!169;UBERON:0000925!6.28e-07!169;UBERON:0006595!6.28e-07!169;UBERON:0008947!6.44e-07!38;UBERON:0003258!6.44e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.73e-07;37!UBERON:0006555;4.79e-07;15!UBERON:0004819;4.79e-07;15!UBERON:0001285;4.79e-07;15!UBERON:0007684;4.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.42e-12,199;UBERON:0000490,3.79e-11,148;UBERON:0003914,5.87e-11,117;UBERON:0005177,3.00e-09,101;UBERON:0003104,7.05e-09,160;UBERON:0009142,7.05e-09,160;UBERON:0009569,7.64e-09,112;UBERON:0005256,2.04e-08,122;UBERON:0001048,2.06e-08,160;UBERON:0001041,2.78e-08,87;UBERON:0000119,1.55e-07,309;UBERON:0005172,3.05e-07,54;UBERON:0005173,3.05e-07,54;UBERON:0000483,3.47e-07,306;UBERON:0004211,5.44e-07,15;UBERON:0009773,5.44e-07,15;UBERON:0001231,5.44e-07,15;UBERON:0001285,5.44e-07,15;UBERON:0007684,5.44e-07,15;UBERON:0004208,5.44e-07,15;UBERON:0008947,6.92e-07,38;UBERON:0003258,6.92e-07,38;UBERON:0007503,8.21e-07,78 | |||
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| ||
|short_description=p2@PHB2 | |short_description=p2@PHB2 | ||
}} | }} |
Latest revision as of 15:45, 24 September 2015
Short description: | p2@PHB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000536316_5end |
EntrezGene: | PHB2 |
HGNC: | 30306 |
UniProt: | F5H3X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.17e-42 | 253 |
embryonic cell | 6.17e-29 | 250 |
squamous epithelial cell | 6.18e-12 | 63 |
endodermal cell | 7.30e-11 | 58 |
mesodermal cell | 4.97e-10 | 121 |
endo-epithelial cell | 1.73e-07 | 42 |
epithelial cell of nephron | 5.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.42e-12 | 199 |
unilaminar epithelium | 3.79e-11 | 148 |
epithelial tube | 5.87e-11 | 117 |
trunk region element | 3.00e-09 | 101 |
mesenchyme | 7.05e-09 | 160 |
entire embryonic mesenchyme | 7.05e-09 | 160 |
subdivision of trunk | 7.64e-09 | 112 |
trunk mesenchyme | 2.04e-08 | 122 |
primordium | 2.06e-08 | 160 |
foregut | 2.78e-08 | 87 |
cell layer | 1.55e-07 | 309 |
abdomen element | 3.05e-07 | 54 |
abdominal segment element | 3.05e-07 | 54 |
epithelium | 3.47e-07 | 306 |
nephron epithelium | 5.44e-07 | 15 |
renal tubule | 5.44e-07 | 15 |
nephron tubule | 5.44e-07 | 15 |
nephron | 5.44e-07 | 15 |
uriniferous tubule | 5.44e-07 | 15 |
nephrogenic mesenchyme | 5.44e-07 | 15 |
respiratory primordium | 6.92e-07 | 38 |
endoderm of foregut | 6.92e-07 | 38 |
epithelial vesicle | 8.21e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.56e-24 | 239 |
cancer | 6.39e-24 | 235 |
carcinoma | 3.79e-18 | 106 |
cell type cancer | 2.60e-17 | 143 |
organ system cancer | 1.48e-07 | 137 |