FFCP PHASE1:Mm9::chr3:29631752..29631756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:29631752..29631756,+ | |||
|description=CAGE_peak_at_chr3:29631752..29631756,+ | |description=CAGE_peak_at_chr3:29631752..29631756,+ | ||
|id=chr3:29631752..29631756,+ | |id=chr3:29631752..29631756,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.66e-11!6;CL:0000677!1.66e-11!6;CL:0000212!1.66e-11!6;CL:0000584!1.66e-11!6;CL:0000075!7.04e-10!7;CL:0002563!1.06e-07!9;CL:0002251!1.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.64e-22,6;CL:0000677,2.64e-22,6;CL:0000584,2.64e-22,6;CL:0000075,3.02e-19,7;CL:0002563,3.69e-15,9;CL:0002251,3.69e-15,9;CL:0002076,2.11e-09,15;CL:0000223,3.19e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.67e-13!15;UBERON:0000160!7.67e-12!43;UBERON:0004923!2.72e-10!24;UBERON:0001962!6.33e-10!2;UBERON:0001961!6.33e-10!2;UBERON:0001744!6.33e-10!2;UBERON:0005409!4.56e-08!59;UBERON:0001242!5.43e-08!13;UBERON:0000060!5.43e-08!13;UBERON:0001262!5.43e-08!13;UBERON:0004786!5.43e-08!13;UBERON:0003350!1.06e-07!9;UBERON:0004808!1.06e-07!9;UBERON:0001277!1.06e-07!9;UBERON:0002465!7.10e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.43e-30,2;UBERON:0001961,2.43e-30,2;UBERON:0001744,2.43e-30,2;UBERON:0000344,1.27e-24,15;UBERON:0002465,1.27e-20,3;UBERON:0003199,6.79e-16,1;UBERON:0004923,1.32e-15,24;UBERON:0003350,3.69e-15,9;UBERON:0004808,3.69e-15,9;UBERON:0001277,3.69e-15,9;UBERON:0000485,1.50e-12,11;UBERON:0001242,9.78e-11,13;UBERON:0001262,9.78e-11,13;UBERON:0004786,9.78e-11,13;UBERON:0000160,5.30e-08,31 | |||
|phase1_expression=0,0,0,2.11724947914781,9.01612313903425,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2393256286132,8.94696196161963,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61126416658861,0,0,0,0,0,0.190225626112559,0,0.823494773620054,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,2.11724947914781,9.01612313903425,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2393256286132,8.94696196161963,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61126416658861,0,0,0,0,0,0.190225626112559,0,0.823494773620054,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr3:29631752..29631756,+ | |short_description=p@chr3:29631752..29631756,+ | ||
}} | }} |
Latest revision as of 08:44, 6 August 2015
Short description: | p@chr3:29631752..29631756, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:29631752..29631756, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.64e-22 | 6 |
gut absorptive cell | 2.64e-22 | 6 |
enterocyte | 2.64e-22 | 6 |
columnar/cuboidal epithelial cell | 3.02e-19 | 7 |
intestinal epithelial cell | 3.69e-15 | 9 |
epithelial cell of alimentary canal | 3.69e-15 | 9 |
endo-epithelial cell | 2.11e-09 | 15 |
endodermal cell | 3.19e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.43e-30 | 2 |
mucosa-associated lymphoid tissue | 2.43e-30 | 2 |
lymphoid tissue | 2.43e-30 | 2 |
mucosa | 1.27e-24 | 15 |
lymphoid system | 1.27e-20 | 3 |
egg chamber | 6.79e-16 | 1 |
organ component layer | 1.32e-15 | 24 |
epithelium of mucosa | 3.69e-15 | 9 |
gastrointestinal system epithelium | 3.69e-15 | 9 |
intestinal epithelium | 3.69e-15 | 9 |
simple columnar epithelium | 1.50e-12 | 11 |
intestinal mucosa | 9.78e-11 | 13 |
wall of intestine | 9.78e-11 | 13 |
gastrointestinal system mucosa | 9.78e-11 | 13 |
intestine | 5.30e-08 | 31 |