Personal tools

FFCP PHASE1:Mm9::chr3:57098710..57098721,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17112
|EntrezGene=17112
|HGNC=
|HGNC=
|MCL_coexpression_id=3411
|TSSclassifier=NA
|UniProt=Q64302
|UniProt=Q64302
|association_with_transcript=89bp_to_ENSMUST00000171384_5end
|association_with_transcript=89bp_to_ENSMUST00000171384_5end
|cluster_id=chr3:57098710..57098721,-
|description=CAGE_peak_3_at_Tm4sf1_5end
|description=CAGE_peak_3_at_Tm4sf1_5end
|id=chr3:57098710..57098721,-
|id=chr3:57098710..57098721,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000222,3.21e-07,7;CL:0000107,7.62e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!7.05e-11!23;UBERON:0001009!7.05e-11!23;UBERON:0004872!2.79e-10!33;UBERON:0005157!3.98e-08!27;UBERON:0007100!7.01e-08!18;UBERON:0000948!7.01e-08!18;UBERON:0005498!7.01e-08!18;UBERON:0004140!7.01e-08!18;UBERON:0009881!7.01e-08!18;UBERON:0004141!7.01e-08!18;UBERON:0003084!7.01e-08!18;UBERON:0007005!7.01e-08!18;UBERON:0004139!7.01e-08!18;UBERON:0004291!7.01e-08!18;UBERON:0003103!4.09e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.35e-13,23;UBERON:0001009,9.35e-13,23;UBERON:0004872,2.80e-11,33;UBERON:0007100,5.31e-09,18;UBERON:0000948,5.31e-09,18;UBERON:0005498,5.31e-09,18;UBERON:0004140,5.31e-09,18;UBERON:0009881,5.31e-09,18;UBERON:0004141,5.31e-09,18;UBERON:0003084,5.31e-09,18;UBERON:0007005,5.31e-09,18;UBERON:0004139,5.31e-09,18;UBERON:0004291,5.31e-09,18;UBERON:0003103,5.79e-08,43;UBERON:0005157,3.26e-07,20;UBERON:0002100,5.60e-07,90;UBERON:0002410,7.62e-07,9
|phase1_expression=5.2849119544582,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,7.60326984146359,4.9557623083654,10.1710874765245,1.09012578190223,9.44650585758229,10.304784650937,4.4795654920116,5.75010257459886,0,0,0,9.26133969729409,7.73640287834643,8.25075347643908,0.202316460859598,1.05798195854407,0,3.72728985276045,2.66788438833342,0,0,0.7104801149461,0.898800331555214,0,0.103689612308478,0.270011876663381,0,0,0.662605622854841,0,0.191690942036473,0,0,0.766124028511126,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,2.25105044012672,1.06958773443767,0,0.569486723196412,0,0.530083353332288,1.43585964202892,9.56552812715537,3.44169550792555,0,0,0,0.896053774194671,0.561777680527007,0.852151612890289,1.81850203222008,0.70667914902068,12.3942209403479,1.28326477414318,2.54805239706646,0,0.216491041011214,2.02687892380079,0.505524445014783,0.11418387971906,1.03575153458869,1.03909497345377,2.4287945747259,2.13125834818499,1.84492397804847,2.71300752994721,1.76383060703557,0.879666139307728,0.741584903203122,3.7595832799177,0.884610551949874,1.61766849947409,2.20841518460394,0.969750506270444,0,0.292780797011547,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,1.21677024134594,0.255715457330331,0.83115217823824,0.324482526135515,2.03678727700633,1.36847667671102,0,1.05220927943237,0.390361328888111,1.14951052216736,0.720248519221397,0.90422890701429,0.204109497453984,1.0249097622788,0.937017245597288,0.258703370739016,0,0,0.879755620819744,0.657587197282725,1.39023624612799,1.0447564995665,1.85203922767149,0.398068533636986,0,0,0,0.828503090142008,1.40715635988658,2.16074473753218,3.31442629819294,1.57411385397923,4.62801338662135,1.86027155800326,1.87791380979733,1.98501082024188,2.46839774870221,3.2833492815819,1.62137619091711,2.04679982395465,1.97595103761946,3.35516046900929,0.841159794256509,0.720332286654991,0,0.528901133327089,0.426576501070468,0.232236671860439,1.03093969057675,0.605050573870028,0.667134131534611,0.760902504450237,1.89811624617805,0.658795818896044,0.754005626400808,1.59165177632921,1.16978452271472,0,0.432276099749388,0.199141273254367,0.758671603812327,2.05647322697512,1.1270773567308,2.03651327845314,2.71533482034676,2.10407459670956,2.84564417059158,1.47610147979602,2.04098346193787,1.97435462274881,0.296452627087149,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,1.64736847912849,0,1.48856379067401,0.624075346229121,0.757736633841335,0.538192240565737,0.482443521363367,6.46636165583116,0.757965647081939,1.14075483509418,0.678980343100753,2.11221223459652,1.34005005953453,1.90434912708811,5.85400943573396,7.88175720530955,7.30833475840957,3.50800491046472,6.882259218061,6.90739927463582,8.67894351489069,0,0,0.491764273019036,1.65562047782839,0.963303539926752,0.468846746368813,4.26230857979356,1.76729649043061,3.47059041357882,2.34263246577983,5.60100834105277,3.58453196928828,4.23317480756549,3.96307143104365,4.45291771842384,2.92255857911312,1.58115111178609,0.321321316421807,0.851640511249612,0.712262414669021,2.11753047159649,1.48473110675282,0,0.242780636154981,0,0.377210159511796,1.47650946440386,1.22974059177571,2.84271122485043,3.63533729477506,1.78248689192361,0.948110273807448,1.05418608574999,0,1.02131881726136,1.08036656418786,0.905510786479282,2.57204442037911,1.59606210278046,3.74574516964348,1.81003922662333,3.34911444026059,0.704015124191131,0.63549621259146,0,1.6488625294148,1.13025098687134,0.904693873922338,1.79058516004705,2.1338316966858,0.582961673259701,1.11255181206306,0.170870880797853,1.23832120777933,2.59272338317596,1.69531611304222,0.410082683163076,1.14389086603261,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,1.09181281873089,0.944050424693745,1.98368293740806,1.30877970992015,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0.972255941720238,1.03327858782185,1.35164900392623,1.29092962510329,0.781226309063701,0.629156066554265,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,0.649604114888975,0.358053391334963,0,0.120195449519969,0.590758108698309,0.201932899896295,0.228620419965,0,0,0,0.116876902181569,0.906921534460845,0,0,0,1.15913756419314,2.064507229963,1.83151624267265,0.857473516316263,1.00314420807073,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,0,0.682934423016537,1.21553358534147,0.209613162627982,0.183843508450014,1.11123363900808,0.824140228955577,0,1.01078884705519,1.52087579934144,0.943131706930381,1.49826411951812,1.02440243847791,0.918967503289812,0,0.811190281613988,0.77163688185482,0.412085900803307,1.03039244094078,1.37147700954166,1.4198064492747,0.715308569841963,1.30811774969096,0.752875043322645,0.676916863133412,1.28049581010941,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,1.22769312950907,1.08455788830176,1.15743966588685,0.999242311751784,0.467863216890817,1.28922632428979,1.91288332068843,1.10295709559758,1.85494268496337
|phase1_expression=5.2849119544582,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,7.60326984146359,4.9557623083654,10.1710874765245,1.09012578190223,9.44650585758229,10.304784650937,4.4795654920116,5.75010257459886,0,0,0,9.26133969729409,7.73640287834643,8.25075347643908,0.202316460859598,1.05798195854407,0,3.72728985276045,2.66788438833342,0,0,0.7104801149461,0.898800331555214,0,0.103689612308478,0.270011876663381,0,0,0.662605622854841,0,0.191690942036473,0,0,0.766124028511126,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,2.25105044012672,1.06958773443767,0,0.569486723196412,0,0.530083353332288,1.43585964202892,9.56552812715537,3.44169550792555,0,0,0,0.896053774194671,0.561777680527007,0.852151612890289,1.81850203222008,0.70667914902068,12.3942209403479,1.28326477414318,2.54805239706646,0,0.216491041011214,2.02687892380079,0.505524445014783,0.11418387971906,1.03575153458869,1.03909497345377,2.4287945747259,2.13125834818499,1.84492397804847,2.71300752994721,1.76383060703557,0.879666139307728,0.741584903203122,3.7595832799177,0.884610551949874,1.61766849947409,2.20841518460394,0.969750506270444,0,0.292780797011547,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,1.21677024134594,0.255715457330331,0.83115217823824,0.324482526135515,2.03678727700633,1.36847667671102,0,1.05220927943237,0.390361328888111,1.14951052216736,0.720248519221397,0.90422890701429,0.204109497453984,1.0249097622788,0.937017245597288,0.258703370739016,0,0,0.879755620819744,0.657587197282725,1.39023624612799,1.0447564995665,1.85203922767149,0.398068533636986,0,0,0,0.828503090142008,1.40715635988658,2.16074473753218,3.31442629819294,1.57411385397923,4.62801338662135,1.86027155800326,1.87791380979733,1.98501082024188,2.46839774870221,3.2833492815819,1.62137619091711,2.04679982395465,1.97595103761946,3.35516046900929,0.841159794256509,0.720332286654991,0,0.528901133327089,0.426576501070468,0.232236671860439,1.03093969057675,0.605050573870028,0.667134131534611,0.760902504450237,1.89811624617805,0.658795818896044,0.754005626400808,1.59165177632921,1.16978452271472,0,0.432276099749388,0.199141273254367,0.758671603812327,2.05647322697512,1.1270773567308,2.03651327845314,2.71533482034676,2.10407459670956,2.84564417059158,1.47610147979602,2.04098346193787,1.97435462274881,0.296452627087149,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,1.64736847912849,0,1.48856379067401,0.624075346229121,0.757736633841335,0.538192240565737,0.482443521363367,6.46636165583116,0.757965647081939,1.14075483509418,0.678980343100753,2.11221223459652,1.34005005953453,1.90434912708811,5.85400943573396,7.88175720530955,7.30833475840957,3.50800491046472,6.882259218061,6.90739927463582,8.67894351489069,0,0,0.491764273019036,1.65562047782839,0.963303539926752,0.468846746368813,4.26230857979356,1.76729649043061,3.47059041357882,2.34263246577983,5.60100834105277,3.58453196928828,4.23317480756549,3.96307143104365,4.45291771842384,2.92255857911312,1.58115111178609,0.321321316421807,0.851640511249612,0.712262414669021,2.11753047159649,1.48473110675282,0,0.242780636154981,0,0.377210159511796,1.47650946440386,1.22974059177571,2.84271122485043,3.63533729477506,1.78248689192361,0.948110273807448,1.05418608574999,0,1.02131881726136,1.08036656418786,0.905510786479282,2.57204442037911,1.59606210278046,3.74574516964348,1.81003922662333,3.34911444026059,0.704015124191131,0.63549621259146,0,1.6488625294148,1.13025098687134,0.904693873922338,1.79058516004705,2.1338316966858,0.582961673259701,1.11255181206306,0.170870880797853,1.23832120777933,2.59272338317596,1.69531611304222,0.410082683163076,1.14389086603261,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,1.09181281873089,0.944050424693745,1.98368293740806,1.30877970992015,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0.972255941720238,1.03327858782185,1.35164900392623,1.29092962510329,0.781226309063701,0.629156066554265,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,0.649604114888975,0.358053391334963,0,0.120195449519969,0.590758108698309,0.201932899896295,0.228620419965,0,0,0,0.116876902181569,0.906921534460845,0,0,0,1.15913756419314,2.064507229963,1.83151624267265,0.857473516316263,1.00314420807073,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,0,0.682934423016537,1.21553358534147,0.209613162627982,0.183843508450014,1.11123363900808,0.824140228955577,0,1.01078884705519,1.52087579934144,0.943131706930381,1.49826411951812,1.02440243847791,0.918967503289812,0,0.811190281613988,0.77163688185482,0.412085900803307,1.03039244094078,1.37147700954166,1.4198064492747,0.715308569841963,1.30811774969096,0.752875043322645,0.676916863133412,1.28049581010941,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,1.22769312950907,1.08455788830176,1.15743966588685,0.999242311751784,0.467863216890817,1.28922632428979,1.91288332068843,1.10295709559758,1.85494268496337
|short_description=p3@Tm4sf1
|short_description=p3@Tm4sf1
}}
}}

Latest revision as of 14:42, 25 September 2015

Short description:p3@Tm4sf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tm4sf1_5end
Coexpression cluster:MCL_coexpression_mm9:3411
Association with transcript: 89bp_to_ENSMUST00000171384_5end
EntrezGene:Tm4sf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tm4sf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mesodermal cell3.21e-077
autonomic neuron7.62e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:57098710..57098721,-&oldid=4197097"