FFCP PHASE1:Mm9::chr10:97069925..97069972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16545 | |EntrezGene=16545 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=882 | |||
|TSSclassifier=NA | |||
|UniProt=O35367,A4FUJ3 | |UniProt=O35367,A4FUJ3 | ||
|association_with_transcript=86bp_to_ENSMUST00000105286,NM_008438,uc007gxa.1_5end | |association_with_transcript=86bp_to_ENSMUST00000105286,NM_008438,uc007gxa.1_5end | ||
|cluster_id=chr10:97069925..97069972,+ | |||
|description=CAGE_peak_2_at_Kera_5end | |description=CAGE_peak_2_at_Kera_5end | ||
|id=chr10:97069925..97069972,+ | |id=chr10:97069925..97069972,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.26e-09!9;UBERON:0000019!4.26e-09!9;UBERON:0000047!4.26e-09!9;UBERON:0004088!4.26e-09!9;UBERON:0002104!4.26e-09!9;UBERON:0001456!4.26e-09!9;UBERON:0003072!4.26e-09!9;UBERON:0003071!4.26e-09!9;UBERON:0004128!4.26e-09!9;UBERON:0000026!1.39e-08!13;UBERON:0004708!1.39e-08!13;UBERON:0002101!1.39e-08!13;UBERON:0004357!1.39e-08!13;UBERON:0009872!1.39e-08!13;UBERON:0004347!1.39e-08!13;UBERON:0005732!1.39e-08!13;UBERON:0005733!1.39e-08!13;UBERON:0001444!2.32e-08!11;UBERON:0003102!1.68e-07!23;UBERON:0000020!2.24e-07!12;UBERON:0001032!2.24e-07!12;UBERON:0004456!2.24e-07!12 | |ontology_enrichment_uberon=UBERON:0000970!4.26e-09!9;UBERON:0000019!4.26e-09!9;UBERON:0000047!4.26e-09!9;UBERON:0004088!4.26e-09!9;UBERON:0002104!4.26e-09!9;UBERON:0001456!4.26e-09!9;UBERON:0003072!4.26e-09!9;UBERON:0003071!4.26e-09!9;UBERON:0004128!4.26e-09!9;UBERON:0000026!1.39e-08!13;UBERON:0004708!1.39e-08!13;UBERON:0002101!1.39e-08!13;UBERON:0004357!1.39e-08!13;UBERON:0009872!1.39e-08!13;UBERON:0004347!1.39e-08!13;UBERON:0005732!1.39e-08!13;UBERON:0005733!1.39e-08!13;UBERON:0001444!2.32e-08!11;UBERON:0003102!1.68e-07!23;UBERON:0000020!2.24e-07!12;UBERON:0001032!2.24e-07!12;UBERON:0004456!2.24e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.82e-14,12;UBERON:0004708,3.82e-14,12;UBERON:0002101,3.82e-14,12;UBERON:0004357,3.82e-14,12;UBERON:0004347,3.82e-14,12;UBERON:0005732,3.82e-14,12;UBERON:0005733,3.82e-14,12;UBERON:0000970,5.51e-13,9;UBERON:0000019,5.51e-13,9;UBERON:0000047,5.51e-13,9;UBERON:0010312,5.51e-13,9;UBERON:0004088,5.51e-13,9;UBERON:0002104,5.51e-13,9;UBERON:0001456,5.51e-13,9;UBERON:0003072,5.51e-13,9;UBERON:0004128,5.51e-13,9;UBERON:0003071,5.51e-13,9;UBERON:0010707,8.10e-13,13;UBERON:0001444,3.41e-12,11;UBERON:0000020,5.81e-11,12;UBERON:0001032,5.81e-11,12;UBERON:0004456,5.81e-11,12;UBERON:0002102,5.99e-11,7;UBERON:0004710,5.99e-11,7;UBERON:0005419,5.99e-11,7;UBERON:0005417,5.99e-11,7;UBERON:0005729,5.99e-11,7;UBERON:0003102,3.64e-10,22;UBERON:0000033,6.37e-10,13;UBERON:0010708,2.20e-09,8;UBERON:0005085,2.70e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0,0,15.3678507450039,5.52103796150984,2.90925151881133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,1.7416975885413,0,3.36706969418358,1.69156575851515,9.42598628177239,20.1669585381991,24.7155901250573,19.3223657589771,24.8540617352609,14.3363638576385,19.1440494346872,2.15567992932842,6.80781888604149,15.8356011747554,16.001288467213,49.2143631129308,51.5413206452806,81.0781617447297,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,1.24815069245824,0,0.717589654087649,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,12.1186045058099,0,0,0,0,0,0,0,0,0,0,0.141940085208269,2.49291845134157,0.81443479676788,0,0,0.485561272309963,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.484393280087717,5.30753739367772,1.07435109602823,0.984845398470368,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.495920734352016,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,1.19513524027894,4.37592090722929,0.419226325255965,1.47074806760011,6.22290837844523,4.94484137373346,4.81378814387723,3.03236654116557,4.81610669791456,4.90428487603798,5.24392441831341,5.37811280200902,4.88201486122713,4.76293691283074,2.66533949673168,4.24400285020151,2.88460130562315,4.71036544430071,5.48590803816665,3.54951612318675,3.33810665926249,5.52316383202848,3.19971893412124,2.19997980518359,4.93905526756486,4.20911538300549,4.48153575691344,3.92799590160417,3.08451047122853,3.15214343601803,3.6830793885272,5.11291575913688,6.17301155139652,1.74867404556562,7.01794825336225,11.1732948105115,24.8674831689496,34.6328528017639,40.3450033979533 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0,0,15.3678507450039,5.52103796150984,2.90925151881133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,1.7416975885413,0,3.36706969418358,1.69156575851515,9.42598628177239,20.1669585381991,24.7155901250573,19.3223657589771,24.8540617352609,14.3363638576385,19.1440494346872,2.15567992932842,6.80781888604149,15.8356011747554,16.001288467213,49.2143631129308,51.5413206452806,81.0781617447297,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,1.24815069245824,0,0.717589654087649,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,12.1186045058099,0,0,0,0,0,0,0,0,0,0,0.141940085208269,2.49291845134157,0.81443479676788,0,0,0.485561272309963,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.484393280087717,5.30753739367772,1.07435109602823,0.984845398470368,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.495920734352016,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,1.19513524027894,4.37592090722929,0.419226325255965,1.47074806760011,6.22290837844523,4.94484137373346,4.81378814387723,3.03236654116557,4.81610669791456,4.90428487603798,5.24392441831341,5.37811280200902,4.88201486122713,4.76293691283074,2.66533949673168,4.24400285020151,2.88460130562315,4.71036544430071,5.48590803816665,3.54951612318675,3.33810665926249,5.52316383202848,3.19971893412124,2.19997980518359,4.93905526756486,4.20911538300549,4.48153575691344,3.92799590160417,3.08451047122853,3.15214343601803,3.6830793885272,5.11291575913688,6.17301155139652,1.74867404556562,7.01794825336225,11.1732948105115,24.8674831689496,34.6328528017639,40.3450033979533 | ||
|short_description=p2@Kera | |short_description=p2@Kera | ||
}} | }} |
Latest revision as of 15:38, 26 September 2015
Short description: | p2@Kera |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kera_5end |
Coexpression cluster: | MCL_coexpression_mm9:882 |
Association with transcript: | 86bp_to_ENSMUST00000105286, NM_008438, uc007gxa.1_5end |
EntrezGene: | Kera |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 3.82e-14 | 12 |
paired limb/fin | 3.82e-14 | 12 |
limb | 3.82e-14 | 12 |
paired limb/fin bud | 3.82e-14 | 12 |
limb bud | 3.82e-14 | 12 |
limb/fin field | 3.82e-14 | 12 |
limb field | 3.82e-14 | 12 |
eye | 5.51e-13 | 9 |
camera-type eye | 5.51e-13 | 9 |
simple eye | 5.51e-13 | 9 |
immature eye | 5.51e-13 | 9 |
ocular region | 5.51e-13 | 9 |
visual system | 5.51e-13 | 9 |
face | 5.51e-13 | 9 |
optic cup | 5.51e-13 | 9 |
optic vesicle | 5.51e-13 | 9 |
eye primordium | 5.51e-13 | 9 |
appendage girdle complex | 8.10e-13 | 13 |
subdivision of head | 3.41e-12 | 11 |
sense organ | 5.81e-11 | 12 |
sensory system | 5.81e-11 | 12 |
entire sense organ system | 5.81e-11 | 12 |
forelimb | 5.99e-11 | 7 |
pectoral appendage | 5.99e-11 | 7 |
pectoral appendage bud | 5.99e-11 | 7 |
forelimb bud | 5.99e-11 | 7 |
forelimb/pectoral fin field | 5.99e-11 | 7 |
surface structure | 3.64e-10 | 22 |
head | 6.37e-10 | 13 |
pectoral complex | 2.20e-09 | 8 |
ectodermal placode | 2.70e-08 | 13 |