FFCP PHASE1:Mm9::chr1:175912973..175912979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100044068,26388 | |EntrezGene=100044068,26388 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=495 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R002 | |UniProt=Q9R002 | ||
|association_with_transcript=0bp_to_ENSMUST00000000266,NM_008327,NM_011940,uc007dsk.2,uc011wwx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000000266,NM_008327,NM_011940,uc007dsk.2,uc011wwx.1_5end | ||
|cluster_id=chr1:175912973..175912979,- | |||
|description=CAGE_peak_1_at_Ifi202b_5end,CAGE_peak_1_at_LOC100044068_5end | |description=CAGE_peak_1_at_Ifi202b_5end,CAGE_peak_1_at_LOC100044068_5end | ||
|id=chr1:175912973..175912979,- | |id=chr1:175912973..175912979,- | ||
|ontology_enrichment_celltype=CL:0000068!3.39e-11!3;CL:0002202!3.39e-11!3;CL:0000069!3.39e-11!3;CL:0002632!3.39e-11!3;CL:0002368!3.39e-11!3;CL:0000307!3.39e-11!3;CL:0000377!3.39e-11!3 | |ontology_enrichment_celltype=CL:0000068!3.39e-11!3;CL:0002202!3.39e-11!3;CL:0000069!3.39e-11!3;CL:0002632!3.39e-11!3;CL:0002368!3.39e-11!3;CL:0000307!3.39e-11!3;CL:0000377!3.39e-11!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.10e-52,3;CL:0002202,1.10e-52,3;CL:0000069,1.10e-52,3;CL:0002632,1.10e-52,3;CL:0002368,1.10e-52,3;CL:0000307,1.10e-52,3;CL:0000377,1.10e-52,3;CL:0002076,2.69e-11,15;CL:0000223,1.15e-08,20;CL:0000066,4.44e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!3.39e-11!3;UBERON:0001005!3.39e-11!3;UBERON:0007196!3.39e-11!3;UBERON:0001558!3.39e-11!3;UBERON:0003102!6.29e-10!23;UBERON:0000072!3.84e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.10e-52,3;UBERON:0001005,1.10e-52,3;UBERON:0007196,1.10e-52,3;UBERON:0001558,1.10e-52,3;UBERON:0000996,7.74e-19,1;UBERON:0001723,2.59e-18,1;UBERON:0001033,2.59e-18,1;UBERON:0010056,2.59e-18,1;UBERON:0000161,7.12e-15,5;UBERON:0000072,5.68e-11,27;UBERON:0005178,4.62e-10,17;UBERON:0005181,4.62e-10,17;UBERON:0002224,4.62e-10,17;UBERON:0000915,4.62e-10,17;UBERON:0008947,4.62e-10,17;UBERON:0003258,4.62e-10,17;UBERON:0000165,7.56e-10,2;UBERON:0000166,7.56e-10,2;UBERON:0000930,7.56e-10,2;UBERON:0000065,1.96e-07,41;UBERON:0001004,2.85e-07,42;UBERON:0000162,3.64e-07,3;UBERON:0001353,3.64e-07,3;UBERON:0000163,3.64e-07,3;UBERON:0006866,3.64e-07,3;UBERON:0001046,3.64e-07,3;UBERON:0000164,3.64e-07,3;UBERON:0000931,3.64e-07,3;UBERON:0003103,4.09e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,5.57391704045217,3.0331466700887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.0603129249281559,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0,0.187682475451182,0,3.42989406526505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,5.57391704045217,3.0331466700887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.0603129249281559,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0,0.187682475451182,0,3.42989406526505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p1@Ifi202b,p1@LOC100044068 | |short_description=p1@Ifi202b,p1@LOC100044068 | ||
}} | }} |
Latest revision as of 20:55, 26 September 2015
Short description: | p1@Ifi202b, p1@LOC100044068 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ifi202b_5end, CAGE_peak_1_at_LOC100044068_5end |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | 0bp_to_ENSMUST00000000266, NM_008327, NM_011940, uc007dsk.2, uc011wwx.1_5end |
EntrezGene: | 100044068,26388 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.10e-52 | 3 |
epithelial cell of tracheobronchial tree | 1.10e-52 | 3 |
branched duct epithelial cell | 1.10e-52 | 3 |
epithelial cell of lower respiratory tract | 1.10e-52 | 3 |
respiratory epithelial cell | 1.10e-52 | 3 |
tracheal epithelial cell | 1.10e-52 | 3 |
tracheoblast | 1.10e-52 | 3 |
endo-epithelial cell | 2.69e-11 | 15 |
endodermal cell | 1.15e-08 | 20 |
epithelial cell | 4.44e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.10e-52 | 3 |
respiratory airway | 1.10e-52 | 3 |
tracheobronchial tree | 1.10e-52 | 3 |
lower respiratory tract | 1.10e-52 | 3 |
vagina | 7.74e-19 | 1 |
tongue | 2.59e-18 | 1 |
gustatory system | 2.59e-18 | 1 |
future tongue | 2.59e-18 | 1 |
orifice | 7.12e-15 | 5 |
segment of respiratory tract | 5.68e-11 | 27 |
thoracic cavity element | 4.62e-10 | 17 |
thoracic segment organ | 4.62e-10 | 17 |
thoracic cavity | 4.62e-10 | 17 |
thoracic segment of trunk | 4.62e-10 | 17 |
respiratory primordium | 4.62e-10 | 17 |
endoderm of foregut | 4.62e-10 | 17 |
mouth | 7.56e-10 | 2 |
oral opening | 7.56e-10 | 2 |
stomodeum | 7.56e-10 | 2 |
respiratory tract | 1.96e-07 | 41 |
respiratory system | 2.85e-07 | 42 |
cloaca | 3.64e-07 | 3 |
anal region | 3.64e-07 | 3 |
embryonic cloaca | 3.64e-07 | 3 |
terminal part of digestive tract | 3.64e-07 | 3 |
hindgut | 3.64e-07 | 3 |
primitive urogenital sinus | 3.64e-07 | 3 |
proctodeum | 3.64e-07 | 3 |
compound organ | 4.09e-07 | 43 |