FFCP PHASE1:Mm9::chr11:104469314..104469326,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16416 | |EntrezGene=16416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=161 | |||
|TSSclassifier=NA | |||
|UniProt=O54890 | |UniProt=O54890 | ||
|association_with_transcript=0bp_to_NM_016780,uc011ygd.1_5end | |association_with_transcript=0bp_to_NM_016780,uc011ygd.1_5end | ||
|cluster_id=chr11:104469314..104469326,+ | |||
|description=CAGE_peak_3_at_Itgb3_5end | |description=CAGE_peak_3_at_Itgb3_5end | ||
|id=chr11:104469314..104469326,+ | |id=chr11:104469314..104469326,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.95e-08,3;CL:0000351,5.95e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.33e-07,3;DOID:4045,1.33e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,2.75e-09,4;UBERON:0000995,2.75e-09,4;UBERON:0000358,5.95e-08,3;UBERON:0000307,5.95e-08,3;UBERON:0007010,5.95e-08,3;UBERON:0005631,6.26e-08,3;UBERON:0000478,6.26e-08,3;UBERON:0000158,6.26e-08,3;UBERON:0003975,2.10e-07,5 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0,0,0.774739940649458,0.140788722151667,0.468129052643987,0.171217968225505,0,2.9104124088305,2.36035086531293,0,0.202475267389826,0,0.788655413395594,0.959801035240171,0.42438965179803,0.255129870453209,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,4.6880120671428,4.18818995179039,1.17646297606203,1.36609096991689,4.36959317728038,0,0.101376931219515,0.183546752161682,0,0,0,0,0.55994568650145,0,0.167782606057736,1.45072428402269,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0.294628585473668,0,0,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.70667914902068,0.563373679106722,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.251333182659351,2.47194967734374,0.722996784599558,2.65383165584962,1.61766849947409,0.883366073841574,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0,1.01839363850316,0.622034853050465,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0.657587197282725,0,0,0.411564272815887,0.995171334092466,0,0,0.568326998791185,0.828503090142008,0.469052119962192,0,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0.583826711835847,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0,0,0,0,0,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.988193728344065,1.00534083520108,1.1937388322469,1.16978452271472,0,1.08069024937347,0.597423819763102,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.786235980452812,0.449724224769707,0.405720242777006,0,0.25462585178142,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.923765950833023,0.189491411770485,0.325929952884052,0.678980343100753,0,0.502518772325447,0.238043640886014,1.36593553500459,0.945810864637146,1.10732344824387,1.59454768657487,0.327726629431476,0.690739927463582,0.578596234326046,0,0,0,0,0.321101179975584,0,0.163934945376675,0.757412781613119,0.315508219416257,0,0.215423397732799,0.477937595905104,0.668396022247182,1.13230612315533,0.404810701674894,0,0.790575555893047,0,0.99358059645788,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0.302323556964751,1.13163047853539,0.590603785761546,0.614870295887855,0.516856586336442,1.45413491791002,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.822745103010605,0.304464949114599,8.44818149029357,9.74427525973573,0.220528398054962,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0.619160603889667,0.185194527369712,0,0.546776910884101,0.686334519619568,0.339956859987711,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.648032044930808,0.418176592028937,0.87345025498471,0.539457385539283,1.23980183588004,0,0.518459893167171,0,0,1.49516546043979,0.992750942742586,1.36115831840833,1.03327858782185,0.844780627453891,0.704143431874524,1.43224823328345,0.629156066554265,0.241584120826006,0.576060012515731,0.632022241256357,1.01362607645082,0.616265742988964,0.25984164595559,0.358053391334963,0,0.600977247599844,0.443068581523732,0.201932899896295,0.381034033274999,0.604957110821043,0.38983152295901,0.384847366561318,0.701261413089414,0,8.43546622821446,6.2799699626633,6.71538465456314,0.772758376128762,1.87682475451182,1.09890974560359,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.505394423527595,0,1.13175804831646,0.468207537349412,0.89635213366817,0.516919220600519,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.436039249896986,0.564656282491984,0.761531471025089,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.355905054372522,1.28055827088233,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0,1.07435527024149,1.72159498861959,0.441182838239031,0.927471342481686 | |phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0,0,0.774739940649458,0.140788722151667,0.468129052643987,0.171217968225505,0,2.9104124088305,2.36035086531293,0,0.202475267389826,0,0.788655413395594,0.959801035240171,0.42438965179803,0.255129870453209,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,4.6880120671428,4.18818995179039,1.17646297606203,1.36609096991689,4.36959317728038,0,0.101376931219515,0.183546752161682,0,0,0,0,0.55994568650145,0,0.167782606057736,1.45072428402269,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0.294628585473668,0,0,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.70667914902068,0.563373679106722,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.251333182659351,2.47194967734374,0.722996784599558,2.65383165584962,1.61766849947409,0.883366073841574,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0,1.01839363850316,0.622034853050465,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0.657587197282725,0,0,0.411564272815887,0.995171334092466,0,0,0.568326998791185,0.828503090142008,0.469052119962192,0,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0.583826711835847,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0,0,0,0,0,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.988193728344065,1.00534083520108,1.1937388322469,1.16978452271472,0,1.08069024937347,0.597423819763102,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.786235980452812,0.449724224769707,0.405720242777006,0,0.25462585178142,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.923765950833023,0.189491411770485,0.325929952884052,0.678980343100753,0,0.502518772325447,0.238043640886014,1.36593553500459,0.945810864637146,1.10732344824387,1.59454768657487,0.327726629431476,0.690739927463582,0.578596234326046,0,0,0,0,0.321101179975584,0,0.163934945376675,0.757412781613119,0.315508219416257,0,0.215423397732799,0.477937595905104,0.668396022247182,1.13230612315533,0.404810701674894,0,0.790575555893047,0,0.99358059645788,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0.302323556964751,1.13163047853539,0.590603785761546,0.614870295887855,0.516856586336442,1.45413491791002,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.822745103010605,0.304464949114599,8.44818149029357,9.74427525973573,0.220528398054962,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0.619160603889667,0.185194527369712,0,0.546776910884101,0.686334519619568,0.339956859987711,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.648032044930808,0.418176592028937,0.87345025498471,0.539457385539283,1.23980183588004,0,0.518459893167171,0,0,1.49516546043979,0.992750942742586,1.36115831840833,1.03327858782185,0.844780627453891,0.704143431874524,1.43224823328345,0.629156066554265,0.241584120826006,0.576060012515731,0.632022241256357,1.01362607645082,0.616265742988964,0.25984164595559,0.358053391334963,0,0.600977247599844,0.443068581523732,0.201932899896295,0.381034033274999,0.604957110821043,0.38983152295901,0.384847366561318,0.701261413089414,0,8.43546622821446,6.2799699626633,6.71538465456314,0.772758376128762,1.87682475451182,1.09890974560359,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.505394423527595,0,1.13175804831646,0.468207537349412,0.89635213366817,0.516919220600519,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.436039249896986,0.564656282491984,0.761531471025089,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.355905054372522,1.28055827088233,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0,1.07435527024149,1.72159498861959,0.441182838239031,0.927471342481686 | ||
|short_description=p3@Itgb3 | |short_description=p3@Itgb3 | ||
}} | }} |
Latest revision as of 19:40, 26 September 2015
Short description: | p3@Itgb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itgb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | 0bp_to_NM_016780, uc011ygd.1_5end |
EntrezGene: | Itgb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.95e-08 | 3 |
trophoblast cell | 5.95e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 2.75e-09 | 4 |
uterus | 2.75e-09 | 4 |
blastocyst | 5.95e-08 | 3 |
blastula | 5.95e-08 | 3 |
cleaving embryo | 5.95e-08 | 3 |
extraembryonic membrane | 6.26e-08 | 3 |
extraembryonic structure | 6.26e-08 | 3 |
membranous layer | 6.26e-08 | 3 |
internal female genitalia | 2.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.33e-07 | 3 |
muscle cancer | 1.33e-07 | 3 |