FFCP PHASE1:Mm9::chr11:109512239..109512317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19084 | |EntrezGene=19084 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q276,A2AI68,Q9DBC7 | |UniProt=E9Q276,A2AI68,Q9DBC7 | ||
|association_with_transcript=0bp_to_ENSMUST00000164771,NM_021880,uc007mcu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000164771,NM_021880,uc007mcu.1_5end | ||
|cluster_id=chr11:109512239..109512317,+ | |||
|description=CAGE_peak_1_at_Prkar1a_5end | |description=CAGE_peak_1_at_Prkar1a_5end | ||
|id=chr11:109512239..109512317,+ | |id=chr11:109512239..109512317,+ | ||
|ontology_enrichment_celltype=CL:0000723!4.29e-12!91;CL:0000048!4.29e-12!91;CL:0000034!4.52e-12!97;CL:0000055!9.71e-12!50;CL:0000144!1.60e-11!121;CL:0000012!1.60e-11!121;CL:0000221!2.22e-10!44;CL:0000133!2.22e-10!44;CL:0002371!3.36e-10!118;CL:0002319!4.28e-10!43;CL:0000548!7.67e-09!115;CL:0000004!7.67e-09!115;CL:0000255!7.67e-09!115;CL:0000393!4.85e-08!39;CL:0000211!4.85e-08!39;CL:0000219!2.36e-07!54;CL:0002321!4.32e-07!70;CL:0000220!4.32e-07!70;CL:0000540!6.72e-07!33;CL:0000047!6.72e-07!33;CL:0000031!6.72e-07!33;CL:0000404!6.72e-07!33 | |ontology_enrichment_celltype=CL:0000723!4.29e-12!91;CL:0000048!4.29e-12!91;CL:0000034!4.52e-12!97;CL:0000055!9.71e-12!50;CL:0000144!1.60e-11!121;CL:0000012!1.60e-11!121;CL:0000221!2.22e-10!44;CL:0000133!2.22e-10!44;CL:0002371!3.36e-10!118;CL:0002319!4.28e-10!43;CL:0000548!7.67e-09!115;CL:0000004!7.67e-09!115;CL:0000255!7.67e-09!115;CL:0000393!4.85e-08!39;CL:0000211!4.85e-08!39;CL:0000219!2.36e-07!54;CL:0002321!4.32e-07!70;CL:0000220!4.32e-07!70;CL:0000540!6.72e-07!33;CL:0000047!6.72e-07!33;CL:0000031!6.72e-07!33;CL:0000404!6.72e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.29e-12,91;CL:0000048,4.29e-12,91;CL:0000034,4.52e-12,97;CL:0000221,2.22e-10,44;CL:0000133,2.22e-10,44;CL:0002319,4.28e-10,43;CL:0000393,4.85e-08,39;CL:0000211,4.85e-08,39;CL:0000219,2.36e-07,54;CL:0002321,4.32e-07,70;CL:0000540,6.72e-07,33;CL:0000047,6.72e-07,33;CL:0000031,6.72e-07,33;CL:0000404,6.72e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.94e-15!75;UBERON:0001016!1.94e-15!75;UBERON:0001017!1.44e-14!73;UBERON:0005743!1.44e-14!73;UBERON:0000025!6.18e-12!114;UBERON:0000477!2.52e-10!154;UBERON:0000955!1.23e-09!50;UBERON:0006238!1.23e-09!50;UBERON:0004111!1.37e-09!122;UBERON:0000119!1.44e-09!183;UBERON:0002616!2.21e-09!49;UBERON:0004121!2.81e-09!102;UBERON:0000924!2.81e-09!102;UBERON:0006601!2.81e-09!102;UBERON:0001049!3.18e-09!52;UBERON:0005068!3.18e-09!52;UBERON:0006241!3.18e-09!52;UBERON:0007135!3.18e-09!52;UBERON:0000483!6.79e-09!181;UBERON:0002346!1.61e-08!71;UBERON:0003075!1.61e-08!71;UBERON:0007284!1.61e-08!71;UBERON:0007811!4.58e-08!86;UBERON:0007100!3.42e-07!18;UBERON:0000948!3.42e-07!18;UBERON:0005498!3.42e-07!18;UBERON:0004140!3.42e-07!18;UBERON:0009881!3.42e-07!18;UBERON:0004141!3.42e-07!18;UBERON:0003084!3.42e-07!18;UBERON:0007005!3.42e-07!18;UBERON:0004139!3.42e-07!18;UBERON:0004291!3.42e-07!18;UBERON:0004535!9.79e-07!23;UBERON:0001009!9.79e-07!23 | |ontology_enrichment_uberon=UBERON:0000073!1.94e-15!75;UBERON:0001016!1.94e-15!75;UBERON:0001017!1.44e-14!73;UBERON:0005743!1.44e-14!73;UBERON:0000025!6.18e-12!114;UBERON:0000477!2.52e-10!154;UBERON:0000955!1.23e-09!50;UBERON:0006238!1.23e-09!50;UBERON:0004111!1.37e-09!122;UBERON:0000119!1.44e-09!183;UBERON:0002616!2.21e-09!49;UBERON:0004121!2.81e-09!102;UBERON:0000924!2.81e-09!102;UBERON:0006601!2.81e-09!102;UBERON:0001049!3.18e-09!52;UBERON:0005068!3.18e-09!52;UBERON:0006241!3.18e-09!52;UBERON:0007135!3.18e-09!52;UBERON:0000483!6.79e-09!181;UBERON:0002346!1.61e-08!71;UBERON:0003075!1.61e-08!71;UBERON:0007284!1.61e-08!71;UBERON:0007811!4.58e-08!86;UBERON:0007100!3.42e-07!18;UBERON:0000948!3.42e-07!18;UBERON:0005498!3.42e-07!18;UBERON:0004140!3.42e-07!18;UBERON:0009881!3.42e-07!18;UBERON:0004141!3.42e-07!18;UBERON:0003084!3.42e-07!18;UBERON:0007005!3.42e-07!18;UBERON:0004139!3.42e-07!18;UBERON:0004291!3.42e-07!18;UBERON:0004535!9.79e-07!23;UBERON:0001009!9.79e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-15,75;UBERON:0001017,1.44e-14,73;UBERON:0010314,3.12e-14,92;UBERON:0000025,6.18e-12,114;UBERON:0000073,3.23e-10,54;UBERON:0004111,1.37e-09,122;UBERON:0001049,3.18e-09,52;UBERON:0005068,3.18e-09,52;UBERON:0006241,3.18e-09,52;UBERON:0007135,3.18e-09,52;UBERON:0000955,3.17e-08,47;UBERON:0006238,3.17e-08,47;UBERON:0002616,5.56e-08,46;UBERON:0000119,8.62e-08,176;UBERON:0004121,1.50e-07,95;UBERON:0000924,1.50e-07,95;UBERON:0006601,1.50e-07,95;UBERON:0000483,3.37e-07,174;UBERON:0007100,3.42e-07,18;UBERON:0000948,3.42e-07,18;UBERON:0005498,3.42e-07,18;UBERON:0004140,3.42e-07,18;UBERON:0009881,3.42e-07,18;UBERON:0004141,3.42e-07,18;UBERON:0003084,3.42e-07,18;UBERON:0007005,3.42e-07,18;UBERON:0004139,3.42e-07,18;UBERON:0004291,3.42e-07,18;UBERON:0002346,8.59e-07,64;UBERON:0003075,8.59e-07,64;UBERON:0007284,8.59e-07,64;UBERON:0004535,9.79e-07,23;UBERON:0001009,9.79e-07,23 | |||
|phase1_expression=184.491471864723,123.886269711973,120.119799198838,101.930439210402,81.1451082513082,103.581510769636,98.3509216907163,210.341893886328,358.307297875992,341.73420843011,203.064510315449,149.094165162284,219.479335771806,190.838738480671,113.590428779141,111.968822866574,123.822452428682,158.519738092514,161.246573920349,207.526539729237,164.473723152169,155.688211482988,168.996263572891,105.435006620855,121.816328246667,116.569088715349,107.690499039769,103.210720456541,104.702904120462,97.0315999575733,112.417368902239,128.276196038846,95.9501068631929,158.481681015439,82.033860009362,91.2628203018123,90.2428554679671,399.697707353747,307.846125742377,324.061197519781,482.349820185432,385.920699001522,389.864813484016,151.327975206644,145.070388575125,172.901040536304,265.230665733985,221.731584038914,193.763213171804,180.042086542786,193.041275421375,217.066372191107,238.754648420159,299.574564650685,267.530664117401,300.479021289986,244.413024267759,264.02411124605,172.980574034956,213.183364646629,180.641949999261,253.455709987711,219.655814639451,274.469413770827,278.860314243887,272.824364139302,225.898483330877,206.709448262996,151.90528203192,169.972476359599,147.017147984616,223.664720788178,233.237179244904,166.097523735478,168.304647108023,170.974694309464,296.211719888356,259.843733003357,274.648481462163,185.036461685462,162.48205503788,160.962231502039,307.659664899522,322.462975548153,299.026170899217,170.000693818306,161.449486026183,158.25312950568,224.225258459558,239.637417098617,251.312511704355,234.895718415918,138.714152076381,159.212441533156,152.697458100202,174.282459080864,129.208866521212,202.982514190467,203.152655599443,212.357084280714,202.81452447842,243.820307087204,290.477973265576,177.766675788333,138.987248329199,152.269279150534,158.734675734642,128.342680804223,150.960786166301,175.607050513688,192.395227383645,246.312571954522,222.774570349353,226.536128750592,178.264480017728,199.181547257536,112.968100254609,136.067994861637,115.883982305434,139.443024654667,104.237196713306,118.794437018129,85.7402101603362,151.36767205497,145.356014528538,98.8618803657249,194.69957732212,184.77004114597,160.108486112062,258.688434252129,199.92776343174,134.324502408652,190.511454930735,221.449586048066,235.216066441422,234.600866395978,126.280811174392,127.019516992905,90.9801930361229,96.803253707778,123.093939042718,163.460396252199,128.384298551214,129.003324067372,118.043326027554,133.110155375959,130.526502311702,131.680015706159,145.508395229669,128.213922353781,126.156956025551,112.885802200201,134.852915874415,113.878458452748,124.703974663214,151.266042782055,160.104606707418,126.61517030044,142.934240195983,157.622712899517,171.673075906162,192.306281640364,176.138083275396,188.893662477508,185.120535464854,210.90828788862,250.835630308644,234.348042130909,260.49824241304,228.028607605863,221.074643631549,277.341376145855,243.481077857775,234.861232830651,175.592107051046,148.285546438549,115.976992827313,95.4666545655395,137.144345094155,147.238049959518,120.233341413513,101.850179934788,101.626766037106,122.124851964263,98.2275157397139,124.8418076808,133.961666290544,124.944664441843,128.4813334115,85.387843822151,91.6425331468703,97.1809413481312,132.95719856811,137.783706207333,119.470199813465,150.091028621997,145.270412888552,147.846308328792,157.964869736395,146.429266795765,159.039711303313,181.393830965047,135.775303205914,105.112416601139,96.1173486103563,92.6431903025597,104.472962515079,109.012076208092,137.497959961967,99.8305596954313,121.277149627726,148.537724534752,221.403038052126,180.860500566893,168.188305808748,162.913376275887,134.009867900868,195.389626152164,179.02584127144,174.521590240616,150.41667325599,169.745085775188,164.048483553663,166.333713639723,156.632715702997,178.742421437744,207.132579355535,175.842963581127,186.243169791945,188.442811923099,184.772930596508,172.421677829162,144.759632581701,107.693325396104,99.3363831498453,98.2334816844848,285.78005017827,280.253142641958,202.459657540194,103.765551080997,166.9038480712,183.115771075123,177.508879731826,199.538946290381,182.249315399398,178.055137866176,169.210873300106,169.508397588561,187.761694524599,195.363360384459,155.566333388262,157.409993641854,134.055967547993,113.664414728077,71.6823747035799,136.199936882945,138.464189089856,97.6974313135552,111.624115508932,102.990774561216,141.101848069849,129.418007693992,110.870684677648,90.3865127696434,82.226514688499,96.9474106532956,156.602218646742,153.412052114676,153.290040282564,162.038798483884,144.709630652095,150.900019691352,160.59984410767,158.017308590477,122.029288193129,83.4618359203452,91.5192851928092,102.559249329601,126.103717249502,105.185741074704,123.908493075256,107.34814843327,86.5698084790657,253.661813150377,115.337844538551,156.441245916123,137.969922890435,117.353548713922,113.729597463893,134.521565845435,283.014085939769,266.327613771921,280.822346770589,108.832450453723,119.89134156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| ||
|short_description=p1@Prkar1a | |short_description=p1@Prkar1a | ||
}} | }} |
Latest revision as of 21:43, 26 September 2015
Short description: | p1@Prkar1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prkar1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000164771, NM_021880, uc007mcu.1_5end |
EntrezGene: | Prkar1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.29e-12 | 91 |
multi fate stem cell | 4.29e-12 | 91 |
stem cell | 4.52e-12 | 97 |
ectodermal cell | 2.22e-10 | 44 |
neurectodermal cell | 2.22e-10 | 44 |
neural cell | 4.28e-10 | 43 |
electrically responsive cell | 4.85e-08 | 39 |
electrically active cell | 4.85e-08 | 39 |
motile cell | 2.36e-07 | 54 |
embryonic cell | 4.32e-07 | 70 |
neuron | 6.72e-07 | 33 |
neuronal stem cell | 6.72e-07 | 33 |
neuroblast | 6.72e-07 | 33 |
electrically signaling cell | 6.72e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.94e-15 | 75 |
central nervous system | 1.44e-14 | 73 |
structure with developmental contribution from neural crest | 3.12e-14 | 92 |
tube | 6.18e-12 | 114 |
regional part of nervous system | 3.23e-10 | 54 |
anatomical conduit | 1.37e-09 | 122 |
neural tube | 3.18e-09 | 52 |
neural rod | 3.18e-09 | 52 |
future spinal cord | 3.18e-09 | 52 |
neural keel | 3.18e-09 | 52 |
brain | 3.17e-08 | 47 |
future brain | 3.17e-08 | 47 |
regional part of brain | 5.56e-08 | 46 |
cell layer | 8.62e-08 | 176 |
ectoderm-derived structure | 1.50e-07 | 95 |
ectoderm | 1.50e-07 | 95 |
presumptive ectoderm | 1.50e-07 | 95 |
epithelium | 3.37e-07 | 174 |
primary circulatory organ | 3.42e-07 | 18 |
heart | 3.42e-07 | 18 |
primitive heart tube | 3.42e-07 | 18 |
primary heart field | 3.42e-07 | 18 |
anterior lateral plate mesoderm | 3.42e-07 | 18 |
heart tube | 3.42e-07 | 18 |
heart primordium | 3.42e-07 | 18 |
cardiac mesoderm | 3.42e-07 | 18 |
cardiogenic plate | 3.42e-07 | 18 |
heart rudiment | 3.42e-07 | 18 |
neurectoderm | 8.59e-07 | 64 |
neural plate | 8.59e-07 | 64 |
presumptive neural plate | 8.59e-07 | 64 |
cardiovascular system | 9.79e-07 | 23 |
circulatory system | 9.79e-07 | 23 |