FFCP PHASE1:Mm9::chr11:48715513..48715546,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=781 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:48715513..48715546,- | |||
|description=CAGE_peak_at_chr11:48715513..48715546,- | |description=CAGE_peak_at_chr11:48715513..48715546,- | ||
|id=chr11:48715513..48715546,- | |id=chr11:48715513..48715546,- | ||
|ontology_enrichment_celltype=CL:0002563!1.45e-09!9;CL:0002251!1.45e-09!9;CL:0000239!1.15e-07!6;CL:0000677!1.15e-07!6;CL:0000212!1.15e-07!6;CL:0000584!1.15e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.45e-09!9;CL:0002251!1.45e-09!9;CL:0000239!1.15e-07!6;CL:0000677!1.15e-07!6;CL:0000212!1.15e-07!6;CL:0000584!1.15e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.01e-09,3;CL:0000239,2.40e-08,6;CL:0000677,2.40e-08,6;CL:0000584,2.40e-08,6;CL:0000075,3.75e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.06e-16!15;UBERON:0000160!9.29e-15!43;UBERON:0001242!2.60e-14!13;UBERON:0000060!2.60e-14!13;UBERON:0001262!2.60e-14!13;UBERON:0004786!2.60e-14!13;UBERON:0004923!2.73e-12!24;UBERON:0005409!4.44e-12!59;UBERON:0003350!1.45e-09!9;UBERON:0004808!1.45e-09!9;UBERON:0001277!1.45e-09!9;UBERON:0004119!3.85e-08!130;UBERON:0000925!3.85e-08!130;UBERON:0006595!3.85e-08!130;UBERON:0001007!7.36e-08!128;UBERON:0001555!7.36e-08!128;UBERON:0007026!7.36e-08!128;UBERON:0000485!2.17e-07!11;UBERON:0007023!3.51e-07!51;UBERON:0004921!7.14e-07!126;UBERON:0004185!7.14e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!2.06e-16!15;UBERON:0000160!9.29e-15!43;UBERON:0001242!2.60e-14!13;UBERON:0000060!2.60e-14!13;UBERON:0001262!2.60e-14!13;UBERON:0004786!2.60e-14!13;UBERON:0004923!2.73e-12!24;UBERON:0005409!4.44e-12!59;UBERON:0003350!1.45e-09!9;UBERON:0004808!1.45e-09!9;UBERON:0001277!1.45e-09!9;UBERON:0004119!3.85e-08!130;UBERON:0000925!3.85e-08!130;UBERON:0006595!3.85e-08!130;UBERON:0001007!7.36e-08!128;UBERON:0001555!7.36e-08!128;UBERON:0007026!7.36e-08!128;UBERON:0000485!2.17e-07!11;UBERON:0007023!3.51e-07!51;UBERON:0004921!7.14e-07!126;UBERON:0004185!7.14e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.45e-32,31;UBERON:0005409,7.57e-22,47;UBERON:0000344,9.16e-19,15;UBERON:0001242,2.69e-14,13;UBERON:0001262,2.69e-14,13;UBERON:0004786,2.69e-14,13;UBERON:0002108,1.04e-12,4;UBERON:0004923,5.26e-11,24;UBERON:0000331,3.56e-10,3;UBERON:0002116,3.56e-10,3;UBERON:0001204,3.56e-10,3;UBERON:0001168,3.56e-10,3;UBERON:0001007,4.88e-10,116;UBERON:0001555,4.88e-10,116;UBERON:0007026,4.88e-10,116;UBERON:0004119,8.78e-10,118;UBERON:0000925,8.78e-10,118;UBERON:0006595,8.78e-10,118;UBERON:0002465,8.68e-09,3;UBERON:0004921,3.22e-08,114 | |||
|phase1_expression=0,3.14077866875425,1.81999695755814,22.6848158480123,30.5546395267272,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0,0,1.75991665072747,3.44113921600755,1.72269589234506,4.73838195774982,3.01659725760245,11.5914285868388,42.3410617996684,3.99114919179548,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73684890342454,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0.134206418760372,0,0,26.10308385572,9.78467096655114,0,0,0.128867461322093,0,0,0.570676878337677,6.16887780007865,3.29397909448022,2.5133520880027,6.36660710531683,2.53453313254856,16.178749355776,9.29393614461185,9.35963984295526,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0,0.119372344003136,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0,0,0,1.03691978633434,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0.859484216193193,0,0,0.463735671240843 | |phase1_expression=0,3.14077866875425,1.81999695755814,22.6848158480123,30.5546395267272,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0,0,1.75991665072747,3.44113921600755,1.72269589234506,4.73838195774982,3.01659725760245,11.5914285868388,42.3410617996684,3.99114919179548,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73684890342454,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0.134206418760372,0,0,26.10308385572,9.78467096655114,0,0,0.128867461322093,0,0,0.570676878337677,6.16887780007865,3.29397909448022,2.5133520880027,6.36660710531683,2.53453313254856,16.178749355776,9.29393614461185,9.35963984295526,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0,0.119372344003136,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0,0,0,1.03691978633434,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0.859484216193193,0,0,0.463735671240843 | ||
|short_description=p@chr11:48715513..48715546,- | |short_description=p@chr11:48715513..48715546,- | ||
}} | }} |
Latest revision as of 23:34, 5 August 2015
Short description: | p@chr11:48715513..48715546, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:48715513..48715546, - |
Coexpression cluster: | MCL_coexpression_mm9:781 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.01e-09 | 3 |
brush border epithelial cell | 2.40e-08 | 6 |
gut absorptive cell | 2.40e-08 | 6 |
enterocyte | 2.40e-08 | 6 |
columnar/cuboidal epithelial cell | 3.75e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.45e-32 | 31 |
gastrointestinal system | 7.57e-22 | 47 |
mucosa | 9.16e-19 | 15 |
intestinal mucosa | 2.69e-14 | 13 |
wall of intestine | 2.69e-14 | 13 |
gastrointestinal system mucosa | 2.69e-14 | 13 |
small intestine | 1.04e-12 | 4 |
organ component layer | 5.26e-11 | 24 |
ileal mucosa | 3.56e-10 | 3 |
ileum | 3.56e-10 | 3 |
mucosa of small intestine | 3.56e-10 | 3 |
wall of small intestine | 3.56e-10 | 3 |
digestive system | 4.88e-10 | 116 |
digestive tract | 4.88e-10 | 116 |
primitive gut | 4.88e-10 | 116 |
endoderm-derived structure | 8.78e-10 | 118 |
endoderm | 8.78e-10 | 118 |
presumptive endoderm | 8.78e-10 | 118 |
lymphoid system | 8.68e-09 | 3 |
subdivision of digestive tract | 3.22e-08 | 114 |