FFCP PHASE1:Mm9::chr2:119488492..119488571,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69702 | |EntrezGene=69702 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CWX2,A2AQ17 | |UniProt=Q9CWX2,A2AQ17 | ||
|association_with_transcript=0bp_to_ENSMUST00000028768,ENSMUST00000110801,ENSMUST00000110802,ENSMUST00000131596,ENSMUST00000154127,NM_027175,uc008luc.1,uc008lud.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028768,ENSMUST00000110801,ENSMUST00000110802,ENSMUST00000131596,ENSMUST00000154127,NM_027175,uc008luc.1,uc008lud.1_5end | ||
|cluster_id=chr2:119488492..119488571,- | |||
|description=CAGE_peak_1_at_Ndufaf1_5end | |description=CAGE_peak_1_at_Ndufaf1_5end | ||
|id=chr2:119488492..119488571,- | |id=chr2:119488492..119488571,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.80e-12!47;UBERON:0002107!1.16e-07!22;UBERON:0007499!1.16e-07!22;UBERON:0006925!1.16e-07!22;UBERON:0009497!1.16e-07!22;UBERON:0000015!1.16e-07!22;UBERON:0002423!1.16e-07!22;UBERON:0006235!1.16e-07!22;UBERON:0008835!1.16e-07!22;UBERON:0003894!1.16e-07!22;UBERON:0004161!1.16e-07!22;UBERON:0008836!1.16e-07!22;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18;UBERON:0000025!3.85e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.80e-12,47;UBERON:0002107,1.16e-07,22;UBERON:0007499,1.16e-07,22;UBERON:0006925,1.16e-07,22;UBERON:0009497,1.16e-07,22;UBERON:0000015,1.16e-07,22;UBERON:0002423,1.16e-07,22;UBERON:0006235,1.16e-07,22;UBERON:0008835,1.16e-07,22;UBERON:0003894,1.16e-07,22;UBERON:0004161,1.16e-07,22;UBERON:0008836,1.16e-07,22;UBERON:0007100,2.05e-07,18;UBERON:0000948,2.05e-07,18;UBERON:0005498,2.05e-07,18;UBERON:0004140,2.05e-07,18;UBERON:0009881,2.05e-07,18;UBERON:0004141,2.05e-07,18;UBERON:0003084,2.05e-07,18;UBERON:0007005,2.05e-07,18;UBERON:0004139,2.05e-07,18;UBERON:0004291,2.05e-07,18;UBERON:0000025,3.85e-07,114 | |||
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|phase1_expression=11.2104192973356,7.32848356042658,7.27998783023258,5.14189159221611,6.51164448930251,8.56184286750638,6.54115393667472,5.03580961422147,3.09735188733667,1.63845168425395,8.04724450659873,5.74359544766422,4.10881751834894,6.03200776691082,5.99597571268193,7.08663435864391,4.19737126876888,8.3597473819933,7.12995054749842,5.09267582157636,9.86502165752409,9.33334941288322,6.79119451761232,7.03966660290989,7.11168771308227,8.6134794617253,10.7690499039769,11.635446565038,7.9809836171677,10.5852654499171,8.42575940490158,6.35030673459631,3.69038872550742,0,15.0202842270663,17.7871070533587,11.2293145944303,5.85944283031671,6.2506827561904,7.85285615960697,6.47054636834116,3.41522742479223,9.22469670759192,5.66535680890098,6.48812359804893,9.9115246167308,2.34717403304412,6.5407546914134,7.68901639570651,4.86074747685709,5.31948402176378,10.062679505548,4.02678254538567,2.17608642603403,2.68875039313971,7.46052364504246,5.15760191889762,8.76642556871652,7.28339259094552,2.64495489636016,8.87363964908651,3.04960078862219,2.66788438833342,2.6996991518442,2.96659908770092,1.4209602298922,5.09320187881288,7.30014780110954,8.29516898467821,7.02030879324791,4.6271491497304,14.568200204594,9.27647871996777,6.24703075996266,8.53024692062304,5.51531271966013,5.50579404996943,12.1302971180928,15.2070467923681,5.01167893374737,8.14240028061446,4.16730696445408,9.77140496504833,14.6318278608237,12.2238598221448,6.48182888042069,8.39992916714707,8.38797506213853,4.69502398665741,4.83657984683427,3.47837386442013,19.7897491705719,10.1995700056163,26.9851595818909,20.1430689408777,15.6809410484067,15.5893306346245,8.69194645148094,8.83272415649754,10.2468476607999,10.4224130634744,6.41632387071589,2.54805239706646,7.11066703153331,6.71122227134764,5.06719730950197,8.08839112023653,13.0169622879728,5.69663344023778,6.82833839698194,9.36820764537134,8.52503339273995,10.1470818792666,12.8114244469729,7.4080885495494,14.5773245942424,4.20231445148436,17.7857209011491,2.65383165584962,8.25010934731787,13.6921741445444,7.75800405016355,3.72783522436244,9.07620470735796,13.6140359428746,3.83185582812887,6.4700167233197,5.99902730993408,9.02198612218759,12.5824137100051,12.8100168789215,8.41884159156192,11.9938780932671,11.2514801225345,14.7529511637288,12.1680947300818,6.41587992256993,8.08645308965605,6.31806896084187,4.41927897361595,7.54698569183682,9.19608417733892,8.10279584124071,7.53524089178575,6.46346741937615,7.04625461566674,8.05834831213668,3.88055056108524,6.25147179505242,7.56424320671277,8.79755620819744,4.16471891612392,6.95118123063995,5.2237824978325,7.61393904709391,8.7575077400137,4.21327912387941,7.97778512055617,9.37739548005456,10.7705401718461,10.0846205791871,12.42428224081,9.70653415899362,12.9864392953287,15.1181770629631,14.6496385192757,16.0964040839772,15.880086561935,21.228220638839,23.8042822914688,26.1041566737655,26.7545976988358,28.5415149878366,24.1571553768669,13.6688466566683,6.27718135513635,4.62586296177317,6.08236303326152,7.89166526980366,6.0381534683714,7.98978260196979,9.4791256572971,6.89371935919098,7.41879941838981,4.2707615539006,8.39964669092456,8.79673230800943,7.56034593756373,7.21367122340745,4.49409704327111,7.78096979548899,8.16479220342906,7.77638393907635,9.13988100877831,5.63538678365402,6.51684249105006,7.37019451236978,7.36426108848345,10.4340286255025,12.8420828742254,13.9728867778824,11.9695249004147,13.6368208460088,10.5112416601139,11.0073037263394,11.9176919563972,9.73728582664814,10.1294407096015,7.89340140522401,9.20627639842594,9.07957269940198,13.1789478330279,18.6898668485561,8.55924179637558,13.1055822708115,18.185679212192,22.6040741037609,18.8152973331713,4.61882975416512,8.33762211790133,8.14824882210129,6.11082308790677,6.80601720036656,6.03022526790537,5.2369600994923,4.09780660501378,4.09851374676097,5.09368786192182,5.58091690301205,4.26044618260919,7.7708241839653,6.36455857758651,13.5712155545345,2.71952841909355,8.35999264132362,6.07060841870411,14.7706542788769,15.4719426301708,2.78689407140348,24.2372090116198,7.2566890465739,6.24701990874622,6.03185513651837,6.21318874676635,6.01556420022464,4.24614796183249,4.85772842009873,5.84511715822624,5.92931666919785,9.63963949265421,6.52924391958036,8.90328018336276,7.00413925220377,4.12425307431339,7.96470830039777,6.06951590387454,9.37203026590728,7.35559811048003,3.83892460745005,5.84126781093462,3.10113951801865,6.18007340111759,5.34746067577082,5.37262488490887,6.32511651449993,5.15677716240934,5.10659408630682,7.0223826672211,6.72665155670323,7.07312215604255,6.56158864476412,4.28085162244969,8.55654907131029,4.87143918583359,6.33613611772018,7.83778662196135,5.07215315526412,5.7710188529518,4.35953952078945,7.53911561601948,7.28171298419132,4.92422699235184,7.86998258900597,15.7611506708933,6.32222258952055,5.98521917093345,5.92622487583077,7.34636982318295,6.56132293060921,7.0921233694022,5.77926661979108,6.15786390224095,6.77179871641677,3.81868247206045,7.27572785236611,7.522820283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| ||
|short_description=p1@Ndufaf1 | |short_description=p1@Ndufaf1 | ||
}} | }} |
Latest revision as of 14:13, 25 September 2015
Short description: | p1@Ndufaf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndufaf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000028768, ENSMUST00000110801, ENSMUST00000110802, ENSMUST00000131596, ENSMUST00000154127, NM_027175, uc008luc.1, uc008lud.1_5end |
EntrezGene: | Ndufaf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.80e-12 | 47 |
liver | 1.16e-07 | 22 |
epithelial sac | 1.16e-07 | 22 |
digestive gland | 1.16e-07 | 22 |
epithelium of foregut-midgut junction | 1.16e-07 | 22 |
anatomical boundary | 1.16e-07 | 22 |
hepatobiliary system | 1.16e-07 | 22 |
foregut-midgut junction | 1.16e-07 | 22 |
hepatic diverticulum | 1.16e-07 | 22 |
liver primordium | 1.16e-07 | 22 |
septum transversum | 1.16e-07 | 22 |
liver bud | 1.16e-07 | 22 |
primary circulatory organ | 2.05e-07 | 18 |
heart | 2.05e-07 | 18 |
primitive heart tube | 2.05e-07 | 18 |
primary heart field | 2.05e-07 | 18 |
anterior lateral plate mesoderm | 2.05e-07 | 18 |
heart tube | 2.05e-07 | 18 |
heart primordium | 2.05e-07 | 18 |
cardiac mesoderm | 2.05e-07 | 18 |
cardiogenic plate | 2.05e-07 | 18 |
heart rudiment | 2.05e-07 | 18 |
tube | 3.85e-07 | 114 |