FFCP PHASE1:Mm9::chr2:155207544..155207620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68728 | |EntrezGene=68728 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFU8,G3UXZ2 | |UniProt=Q8CFU8,G3UXZ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000043237,ENSMUST00000173406,ENSMUST00000174685,NM_178111,uc008nkk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000043237,ENSMUST00000173406,ENSMUST00000174685,NM_178111,uc008nkk.1_5end | ||
|cluster_id=chr2:155207544..155207620,+ | |||
|description=CAGE_peak_1_at_Trp53inp2_5end | |description=CAGE_peak_1_at_Trp53inp2_5end | ||
|id=chr2:155207544..155207620,+ | |id=chr2:155207544..155207620,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.35e-10!43;CL:0000055!4.87e-10!50;CL:0000221!8.34e-10!44;CL:0000133!8.34e-10!44;CL:0002321!5.79e-07!70;CL:0000220!5.79e-07!70;CL:0000540!6.24e-07!33;CL:0000047!6.24e-07!33;CL:0000031!6.24e-07!33;CL:0000404!6.24e-07!33 | |ontology_enrichment_celltype=CL:0002319!2.35e-10!43;CL:0000055!4.87e-10!50;CL:0000221!8.34e-10!44;CL:0000133!8.34e-10!44;CL:0002321!5.79e-07!70;CL:0000220!5.79e-07!70;CL:0000540!6.24e-07!33;CL:0000047!6.24e-07!33;CL:0000031!6.24e-07!33;CL:0000404!6.24e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.35e-10,43;CL:0000221,8.34e-10,44;CL:0000133,8.34e-10,44;CL:0002321,5.79e-07,70;CL:0000540,6.24e-07,33;CL:0000047,6.24e-07,33;CL:0000031,6.24e-07,33;CL:0000404,6.24e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-15!73;UBERON:0005743!2.03e-15!73;UBERON:0004121!2.73e-15!102;UBERON:0000924!2.73e-15!102;UBERON:0006601!2.73e-15!102;UBERON:0000073!4.38e-15!75;UBERON:0001016!4.38e-15!75;UBERON:0004111!1.33e-13!122;UBERON:0000025!6.66e-13!114;UBERON:0000955!5.44e-10!50;UBERON:0006238!5.44e-10!50;UBERON:0001049!9.36e-10!52;UBERON:0005068!9.36e-10!52;UBERON:0006241!9.36e-10!52;UBERON:0007135!9.36e-10!52;UBERON:0002616!1.08e-09!49;UBERON:0002346!3.07e-09!71;UBERON:0003075!3.07e-09!71;UBERON:0007284!3.07e-09!71;UBERON:0000033!2.37e-08!63;UBERON:0007100!2.82e-08!18;UBERON:0000948!2.82e-08!18;UBERON:0005498!2.82e-08!18;UBERON:0004140!2.82e-08!18;UBERON:0009881!2.82e-08!18;UBERON:0004141!2.82e-08!18;UBERON:0003084!2.82e-08!18;UBERON:0007005!2.82e-08!18;UBERON:0004139!2.82e-08!18;UBERON:0004291!2.82e-08!18;UBERON:0002020!2.00e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.05e-15,92;UBERON:0001017,2.03e-15,73;UBERON:0001016,4.38e-15,75;UBERON:0004121,9.73e-15,95;UBERON:0000924,9.73e-15,95;UBERON:0006601,9.73e-15,95;UBERON:0004111,1.33e-13,122;UBERON:0000025,6.66e-13,114;UBERON:0000073,1.42e-10,54;UBERON:0001049,9.36e-10,52;UBERON:0005068,9.36e-10,52;UBERON:0006241,9.36e-10,52;UBERON:0007135,9.36e-10,52;UBERON:0002346,7.85e-09,64;UBERON:0003075,7.85e-09,64;UBERON:0007284,7.85e-09,64;UBERON:0010371,7.95e-09,73;UBERON:0000955,1.18e-08,47;UBERON:0006238,1.18e-08,47;UBERON:0002616,2.28e-08,46;UBERON:0007100,2.82e-08,18;UBERON:0000948,2.82e-08,18;UBERON:0005498,2.82e-08,18;UBERON:0004140,2.82e-08,18;UBERON:0009881,2.82e-08,18;UBERON:0004141,2.82e-08,18;UBERON:0003084,2.82e-08,18;UBERON:0007005,2.82e-08,18;UBERON:0004139,2.82e-08,18;UBERON:0004291,2.82e-08,18;UBERON:0002020,2.00e-07,34 | |||
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| ||
|short_description=p1@Trp53inp2 | |short_description=p1@Trp53inp2 | ||
}} | }} |
Latest revision as of 23:33, 25 September 2015
Short description: | p1@Trp53inp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trp53inp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000043237, ENSMUST00000173406, ENSMUST00000174685, NM_178111, uc008nkk.1_5end |
EntrezGene: | Trp53inp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.35e-10 | 43 |
ectodermal cell | 8.34e-10 | 44 |
neurectodermal cell | 8.34e-10 | 44 |
embryonic cell | 5.79e-07 | 70 |
neuron | 6.24e-07 | 33 |
neuronal stem cell | 6.24e-07 | 33 |
neuroblast | 6.24e-07 | 33 |
electrically signaling cell | 6.24e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.05e-15 | 92 |
central nervous system | 2.03e-15 | 73 |
nervous system | 4.38e-15 | 75 |
ectoderm-derived structure | 9.73e-15 | 95 |
ectoderm | 9.73e-15 | 95 |
presumptive ectoderm | 9.73e-15 | 95 |
anatomical conduit | 1.33e-13 | 122 |
tube | 6.66e-13 | 114 |
regional part of nervous system | 1.42e-10 | 54 |
neural tube | 9.36e-10 | 52 |
neural rod | 9.36e-10 | 52 |
future spinal cord | 9.36e-10 | 52 |
neural keel | 9.36e-10 | 52 |
neurectoderm | 7.85e-09 | 64 |
neural plate | 7.85e-09 | 64 |
presumptive neural plate | 7.85e-09 | 64 |
ecto-epithelium | 7.95e-09 | 73 |
brain | 1.18e-08 | 47 |
future brain | 1.18e-08 | 47 |
regional part of brain | 2.28e-08 | 46 |
primary circulatory organ | 2.82e-08 | 18 |
heart | 2.82e-08 | 18 |
primitive heart tube | 2.82e-08 | 18 |
primary heart field | 2.82e-08 | 18 |
anterior lateral plate mesoderm | 2.82e-08 | 18 |
heart tube | 2.82e-08 | 18 |
heart primordium | 2.82e-08 | 18 |
cardiac mesoderm | 2.82e-08 | 18 |
cardiogenic plate | 2.82e-08 | 18 |
heart rudiment | 2.82e-08 | 18 |
gray matter | 2.00e-07 | 34 |